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zwang structure [94 articles]

最近 zwang さんのライブラリに追加された論文の中から タグ structure. You can also see everyone's structure.
  • A Dominant Conformational Role for Amino Acid Diversity in Minimalist Protein-Protein Interfaces
    Journal of Molecular Biology, Vol. 381, No. 2. (29 August 2008), pp. 407-418.
    by Ryan N Gilbreth, Kaori Esaki, Akiko Koide, Sachdev S Sidhu, Shohei Koide
    posted to structure protein interface interaction by zwang on 2008-07-18 04:02:00 as ** along with 1 person phoenixzxl
  • Analyzing Protein Interaction Networks Using Structural Information
    Annual Review of Biochemistry, Vol. 77, No. 1. (2008)
    by Christina Kiel, Pedro Beltrao, Luis Serrano
    posted to structure review protein network interaction by zwang on 2008-07-16 04:11:11 as **** along with 5 people phoenixzxl paolomarcatili grahamc neils Evangelia
  • Protein-Protein Interactions in the Membrane: Sequence, Structural, and Biological Motifs
    Structure, Vol. 16, No. 7. (9 July 2008), pp. 991-1001.
    by David T Moore, Bryan W Berger, William F Degrado
    posted to structure protein interaction by zwang on 2008-07-14 02:46:16 as ** along with 2 people jonsta247 neils
  • Implications for kinetochore-microtubule attachment from the structure of an engineered Ndc80 complex.
    Cell, Vol. 133, No. 3. (2 May 2008), pp. 427-439.
    by C Ciferri, S Pasqualato, E Screpanti, G Varetti, S Santaguida, G Dos Reis, A Maiolica, J Polka, JG De Luca, P De Wulf, M Salek, J Rappsilber, CA Moores, ED Salmon, A Musacchio
    posted to structure complex by zwang on 2008-07-10 09:23:58 as **
  • Structural and Functional Studies of Nup107/Nup133 Interaction and Its Implications for the Architecture of the Nuclear Pore Complex
    Molecular Cell, Vol. 30, No. 6. (20 June 2008), pp. 721-731.
    by Thomas Boehmer, Sandra Jeudy, Ian C Berke, Thomas U Schwartz
    posted to structure interaction complex by zwang on 2008-07-07 04:18:01 as **
  • Structural Basis for the Cooperation of Hsp70 and Hsp110 Chaperones in Protein Folding
    Cell, Vol. 133, No. 6. (13 June 2008), pp. 1068-1079.
    by Sigrun Polier, Zdravko Dragovic, Ulrich F Hartl, Andreas Bracher
    posted to structure folding by zwang on 2008-07-07 04:17:04 as **
  • Importin-[beta]: Structural and Dynamic Determinants of a Molecular Spring
    Structure, Vol. 16, No. 6. (11 June 2008), pp. 906-915.
    by Ulrich Zachariae, Helmut Grubmüller
    posted to structure by zwang on 2008-07-07 04:14:27 as * along with 1 person choonpeng
  • A generative, probabilistic model of local protein structure
    Proceedings of the National Academy of Sciences, Vol. 105, No. 26. (1 July 2008), pp. 8932-8937.
    by Wouter Boomsma, Kanti V Mardia, Charles C Taylor, Jesper Ferkinghoff-Borg, Anders Krogh, Thomas Hamelryck
    posted to structure protein modeling by zwang on 2008-07-02 11:49:14 as * along with 3 people mijam apaydin biehl
  • Using multiple templates to improve quality of homology models in automated homology modeling
    Protein Sci, Vol. 17, No. 6. (1 June 2008), pp. 990-1002.
    by Per Larsson, Bjorn Wallner, Erik Lindahl, Arne Elofsson
    posted to structure homologymodeling by zwang on 2008-07-01 08:51:22 as **
  • Structural specificity in coiled-coil interactions
    Current Opinion in Structural Biology, Vol. In Press, Corrected Proof
    by Gevorg Grigoryan, Amy E Keating
    posted to structure interaction coil by zwang on 2008-06-27 03:58:27 as ** along with 2 people marck phoenixzxl
  • Protein model refinement using an optimized physics-based all-atom force field
    Proceedings of the National Academy of Sciences, Vol. 105, No. 24. (17 June 2008), pp. 8268-8273.
    by Anna Jagielska, Liliana Wroblewska, Jeffrey Skolnick
    posted to structure protein by zwang on 2008-06-27 03:37:45 as ** along with 3 people and 2 groups barry jmccammon RamuAnandakrishnan McCammon structural_bioinformatics
  • Progress and challenges in protein structure prediction
    Current Opinion in Structural Biology, Vol. 18, No. 3. (June 2008), pp. 342-348.
    by Yang Zhang
    posted to structure protein prediction by zwang on 2008-06-27 03:37:25 as ** along with 2 people marck phoenixzxl
  • Assembly reflects evolution of protein complexes
    Nature (18 June 2008)
    by Emmanuel D Levy, Elisabetta B Erba, Carol V Robinson, Sarah A Teichmann
    posted to structure protein evolution complex by zwang on 2008-06-27 03:35:25 as **** along with 7 people marck faion psique phoenixzxl jwm neils paulschlesinger
  • Direct observation of fast protein conformational switching
    Proceedings of the National Academy of Sciences, Vol. 105, No. 25. (24 June 2008), pp. 8619-8624.
    by Haruto Ishikawa, Kyungwon Kwak, Jean K Chung, Seongheun Kim, Michael D Fayer
    posted to structure protein by zwang on 2008-06-25 05:44:14 as **
  • Predicting novel RNA-RNA interactions.
    Current opinion in structural biology (14 May 2008)
    by Irmtraud M M Meyer
    posted to structure rna prediction interaction by zwang on 2008-06-16 03:49:12 as ***** along with 1 person marck
  • Implications from a Network-Based Topological Analysis of Ubiquitin Unfolding Simulations
    PLoS ONE, Vol. 3, No. 5. (14 May 2008), e2149.
    by Arun Krishnan, Alessandro Giuliani, Joseph P Zbilut, Masaru Tomita
    posted to structure simulation protein network folding by zwang on 2008-06-16 01:54:32 as ** along with 1 person phoenixzxl
  • Recent Progress and Future Directions in Protein-Protein Docking
    posted to structure protein docking by zwang on 2008-05-09 02:42:39 as **
  • 3D structure of the influenza virus polymerase complex: Localization of subunit domains
    Proceedings of the National Academy of Sciences, Vol. 101, No. 1. (6 January 2004), pp. 308-313.
    by Estela Area, Jaime Martin-Benito, Pablo Gastaminza, Eva Torreira, Jose M Valpuesta, Jose L Carrascosa, Juan Ortin
    posted to structure influenza complex by zwang on 2008-05-09 02:38:39 as **
  • Multiple Routes and Structural Heterogeneity in Protein Folding
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 489-510.
    by Jayant B Udgaonkar
    posted to structure protein folding by zwang on 2008-05-08 09:59:05 as **
  • Structural Principles from Large RNAs
    Annual Review of Biophysics, Vol. 37, No. 1. (2008)
    by Stephen R Holbrook
    posted to structure secondary rna by zwang on 2008-05-08 09:57:07 as *****
  • Structure of Eukaryotic RNA Polymerases
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 337-352.
    by P Cramer, KJ Armache, S Baumli, S Benkert, F Brueckner, C Buchen, GE Damsma, S Dengl, SR Geiger, AJ Jasiak, A Jawhari, S Jennebach, T Kamenski, H Kettenberger, CD Kuhn, E Lehmann, K Leike, JF Sydow, A Vannini
    posted to structure rna eukaryota by zwang on 2008-05-08 09:54:27 as **
  • Riboswitches: Emerging Themes in RNA Structure and Function
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 117-133.
    by Rebecca K Montange, Robert T Batey
    posted to structure rna by zwang on 2008-05-08 09:48:18 as ****
  • Using structural analysis to generate parasite-selective monoclonal antibodies
    Protein Sci (14 April 2008), ps.073429808.
    by Michael A Kron, Sam Cichanowicz, Angela Hendrick, Aizhuo Liu, Joseph Leykam, Leslie A Kuhn
    posted to antibody immunity structure by zwang on 2008-04-15 02:16:08 as **
  • Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments
    Proceedings of the National Academy of Sciences, Vol. 105, No. 14. (8 April 2008), pp. 5441-5446.
    by Lei Xie, Philip E Bourne
    posted to alignment evolution profile sequence structure by zwang on 2008-04-09 03:58:23 as ** along with 1 person and 1 group sobolevnrm baker-group
  • From the Cover: Consistent blind protein structure generation from NMR chemical shift data
    Proceedings of the National Academy of Sciences, Vol. 105, No. 12. (25 March 2008), pp. 4685-4690.
    by Yang Shen, Oliver Lange, Frank Delaglio, Paolo Rossi, James M Aramini, Gaohua Liu, Alexander Eletsky, Yibing Wu, Kiran K Singarapu, Alexander Lemak, Alexandr Ignatchenko, Cheryl H Arrowsmith, Thomas Szyperski, Gaetano T Montelione, David Baker, Ad Bax
    posted to nmr protein structure by zwang on 2008-03-27 14:26:51 as * along with 4 people and 1 group apaydin biehl sunhwan skoddet Nielsen group
  • The role of disorder in interaction networks: a structural analysis
    Mol Syst Biol, Vol. 4 (25 March 2008)
    by Philip M Kim, Andrea Sboner, Yu Xia, Mark Gerstein
    posted to interaction network structure by zwang on 2008-03-27 05:09:26 as ** along with 5 people chad_davis bootsy biomcgary maralena phoenixzxl
  • The long coming of computational structural biology
    Journal of Structural Biology, Vol. In Press, Accepted Manuscript
    by Andrei N Lupas
    posted to computational structure by zwang on 2008-03-20 13:25:51 as ** along with 1 person and 1 group psique psique blog references
  • Correlated substitution analysis and the prediction of amino acid structural contacts
    Brief Bioinform (13 November 2007), bbm052.
    by David S Horner, Walter Pirovano, Graziano Pesole
    posted to co-evolution contact prediction structure substitution by zwang on 2008-03-20 13:25:08 as *** along with 2 people and 3 groups barry sobolevnrm structural_bioinformatics Bioinformatics baker-group
  • PLoS Computational Biology: Evolutionary Patterns in the Sequence and Structure of Transfer RNA: Early Origins of Archaea and Viruses
    posted to archaea evolution rna sequence structure virus by zwang on 2008-03-20 13:24:28 as **
  • Structural inference of native and partially folded RNA by high-throughput contact mapping
    Proceedings of the National Academy of Sciences, Vol. 105, No. 11. (18 March 2008), pp. 4144-4149.
    by Rhiju Das, Madhuri Kudaravalli, Magdalena Jonikas, Alain Laederach, Robert Fong, Jason P Schwans, David Baker, Joseph A Piccirilli, Russ B Altman, Daniel Herschlag
    posted to contact folding rna structure by zwang on 2008-03-20 13:00:39 as ***** along with 1 person and 1 group wsjames Oxford Virology
  • The structure of protein evolution and the evolution of protein structure
    Current Opinion in Structural Biology, Vol. In Press, Corrected Proof
    by Richard A Goldstein
    posted to evolution protein structure by zwang on 2008-03-11 01:11:59 as *** along with 2 people bpb cmzmasek
  • The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
    Nature, Vol. 452, No. 7183., pp. 51-55.
    by Marc Parisien, François Major
    posted to prediction rna sequence structure by zwang on 2008-03-07 02:48:26 as *** along with 3 people reyez austin elfar
  • PLoS Computational Biology: Accurate Structural Correlations from Maximum Likelihood Superpositions
    posted to likelihood structure by zwang on 2008-03-03 04:35:44 as ** along with 1 person and 1 group sobolevnrm baker-group
  • Crystal Structure of Unliganded Influenza B Virus Hemagglutinin
    J. Virol., Vol. 82, No. 6. (15 March 2008), pp. 3011-3020.
    by Qinghua Wang, Feng Cheng, Mingyang Lu, Xia Tian, Jianpeng Ma
    posted to influenza structure virus by zwang on 2008-02-26 06:16:03 as ***
  • A fast structural multiple alignment method for long RNA sequences
    BMC Bioinformatics, Vol. 9 (23 January 2008), 33.
    by Yasuo Tabei, Hisanori Kiryu, Taishin Kin, Kiyoshi Asai
    posted to alignment rna sequence structure by zwang on 2008-02-24 13:44:59 as ***** along with 1 person mtagaya
  • I-TASSER server for protein 3D structure prediction
    BMC Bioinformatics, Vol. 9 (23 January 2008), 40.
    by Yang Zhang
    posted to prediction protein structure by zwang on 2008-02-24 13:43:46 as ** along with 4 people chad_davis mkurc rabio mclarenv
  • A structural understanding of the dynamic ribosome machine
    Nature Reviews Molecular Cell Biology, Vol. 9, No. 3., pp. 242-253.
    by Thomas A Steitz
    posted to dynamics ribosome structure by zwang on 2008-02-23 07:16:18 as * along with 1 person simone
  • Designed Protein-Protein Association
    Science, Vol. 319, No. 5860. (11 January 2008), pp. 206-209.
    by Dirk Grueninger, Nora Treiber, Mathias O Ziegler, Jochen W Koetter, Monika-Sarah Schulze, Georg E Schulz
    posted to interaction protein structure by zwang on 2008-01-17 04:23:36 as ** along with 5 people and 1 group higueruelo cjeans cactus biomcgary sobolevnrm baker-group
  • Synthetic antibodies for specific recognition and crystallization of structured RNA
    Proceedings of the National Academy of Sciences, Vol. 105, No. 1. (8 January 2008), pp. 82-87.
    by Jing-Dong Ye, Valentina Tereshko, John K Frederiksen, Akiko Koide, Frederic A Fellouse, Sachdev S Sidhu, Shohei Koide, Anthony A Kossiakoff, Joseph A Piccirilli
    posted to antibody protein rna structure by zwang on 2008-01-10 14:30:57 as ***
  • A threading-based method (FINDSITE) for ligand-binding site prediction and functional annotation
    Proceedings of the National Academy of Sciences (28 December 2007), 0707684105.
    by Michal Brylinski, Jeffrey Skolnick
    posted to annotation binding prediction site structure threading by zwang on 2008-01-10 01:30:18 as ** along with 1 person cjeans
  • Modeling of protein binary complexes using structural mass spectrometry data
    Protein Sci, Vol. 17, No. 1. (1 January 2008), pp. 79-94.
    by Amisha JK Kamal, Mark R Chance
    posted to complex massspectrometry protein structure by zwang on 2007-12-22 03:02:36 as ****
  • Dissecting protein structure and function using directed evolution
    Nat Meth, Vol. 4, No. 12. (December 2007), pp. 995-997.
    by Courtney M Yuen, David R Liu
    posted to evolution function protein structure by zwang on 2007-12-10 05:04:21 as *** along with 1 person cjeans
  • Predicting protein function from sequence and structure
    Nat Rev Mol Cell Biol, Vol. 8, No. 12. (December 2007), pp. 995-1005.
    by David Lee, Oliver Redfern, Christine Orengo
    posted to function prediction protein review sequence structure by zwang on 2007-12-08 08:55:16 as *** along with 8 people kluck skhadar neils cjeans Evangelia hpaces Ema renatomilani
  • The Modular Organization of Domain Structures: Insights into Protein–Protein Binding
    PLoS Computational Biology, Vol. 3, No. 12. (1 December 2007), e239.
    by Del, Pablo Carbonell
    posted to binding domain protein structure by zwang on 2007-12-08 08:54:46 as ** along with 9 people carlk bicko chad_davis choonpeng grahamc cjeans niallhaslam biehl marti
  • Construction of effective free energy landscape from single-molecule time series
    Proceedings of the National Academy of Sciences, Vol. 104, No. 49. (4 December 2007), pp. 19297-19302.
    by Akinori Baba, Tamiki Komatsuzaki
    posted to structure by zwang on 2007-12-05 11:06:54 as * along with 6 people and 1 group hsekiguc hmk cactus sobolevnrm Diego_Prada arnaudriegert baker-group
  • High-resolution structure prediction and the crystallographic phase problem
    Nature (14 October 2007)
    by Bin Qian, Srivatsan Raman, Rhiju Das, Philip Bradley, Airlie J Mccoy, Randy J Read, David Baker
    posted to prediction structure by zwang on 2007-11-13 17:07:38 as *** along with 15 people and 2 groups ardalby apaydin aheilbut jwm chad_davis eckart_bindewald ffranca dgront massivemayhem cjeans cactus sobolevnrm boris_aguilar Ema chenway OPIG baker-group
  • Prediction of the structure of symmetrical protein assemblies
    Proceedings of the National Academy of Sciences (31 October 2007), 0702626104.
    by Ingemar Andre, Philip Bradley, Chu Wang, David Baker
    posted to prediction protein structure by zwang on 2007-11-07 07:44:46 as * along with 4 people and 2 groups jwm jmrivort cjeans sobolevnrm Supramolecular baker-group
  • Structure-Templated Predictions of Novel Protein Interactions from Sequence Information
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e182.
    by Doron Betel, Kevin E Breitkreuz, Ruth Isserlin, Danielle Dewar-Darch, Mike Tyers, Christopher W Hogue
    posted to interaction prediction protein sequence structure by zwang on 2007-11-02 08:05:43 as *** along with 3 people bicko chad_davis dquest
  • A study of communication pathways in methionyl- tRNA synthetase by molecular dynamics simulations and structure network analysis
    Proceedings of the National Academy of Sciences, Vol. 104, No. 40. (2 October 2007), pp. 15711-15716.
    by Amit Ghosh, Saraswathi Vishveshwara
    posted to network protein rna simulation structure by zwang on 2007-11-01 07:34:35 as ** along with 3 people and 1 group phoenixzxl cactus sobolevnrm baker-group
  • Evaluating and Learning from RNA Pseudotorsional Space: Quantitative Validation of a Reduced Representation for RNA Structure
    Journal of Molecular Biology, Vol. 372, No. 4. (28 September 2007), pp. 942-957.
    by Leven M Wadley, Kevin S Keating, Carlos M Duarte, Anna M Pyle
    posted to prediction rna structure by zwang on 2007-11-01 07:34:03 as ** along with 1 person reyez
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