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wenhan Borodovsky [25 articles]

最近 wenhan さんのライブラリに追加された論文の中から 著者が Borodovsky. であるものをリストアップしています. You can also see everyone's Borodovsky.
  • Prokaryotic gene identification in silico
    by M Borodovsky, R Azad
    edited by MJ Dunn, LB Jorde, PFR Little, S Subramaniam
    posted to 200806_prop by wenhan on 2008-06-25 22:54:54 as **
  • Identification of new human cadherin genes using a combination of protein motif search and gene finding methods.
    Journal of molecular biology, Vol. 337, No. 2. (19 March 2004), pp. 307-317.
    by JC Höng, NV Ivanov, P Hodor, M Xia, N Wei, R Blevins, D Gerhold, M Borodovsky, Y Liu
    posted to 200806_prop by wenhan on 2008-06-25 21:59:45 as **
  • Effects of choice of DNA sequence model structure on gene identification accuracy.
    Bioinformatics (Oxford, England), Vol. 20, No. 7. (1 May 2004), pp. 993-1005.
    by RK Azad, M Borodovsky
    posted to 200806_prop by wenhan on 2008-06-25 21:59:12 as **
  • Probabilistic methods of identifying genes in prokaryotic genomes: connections to the HMM theory.
    Briefings in bioinformatics, Vol. 5, No. 2. (June 2004), pp. 118-130.
    by RK Azad, M Borodovsky
    posted to 200806_prop by wenhan on 2008-06-25 21:58:50 as **
  • Three new isoforms of Caenorhabditis elegans UNC-89 containing MLCK-like protein kinase domains.
    Journal of molecular biology, Vol. 342, No. 1. (3 September 2004), pp. 91-108.
    by TM Small, KM Gernert, DB Flaherty, KB Mercer, M Borodovsky, GM Benian
    posted to 200806_prop by wenhan on 2008-06-25 21:58:28 as **
  • Identification of proteins associated with murine cytomegalovirus virions.
    Journal of virology, Vol. 78, No. 20. (October 2004), pp. 11187-11197.
    by LM Kattenhorn, R Mills, M Wagner, A Lomsadze, V Makeev, M Borodovsky, HL Ploegh, BM Kessler
    posted to 200806_prop by wenhan on 2008-06-25 21:58:08 as **
  • Statistical significance in biological sequence analysis.
    Brief Bioinform, Vol. 7, No. 1. (March 2006), pp. 2-24.
    by AY Mitrophanov, M Borodovsky
    posted to 200806_prop by wenhan on 2008-06-25 21:55:19 as ** along with 2 people Ayest xili03
  • Protein secondary structure prediction with semi Markov HMMs.
    Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference, Vol. 4 (2004), pp. 2964-2967.
    by Z Aydin, Y Altunbasak, M Borodovsky
    posted to 200806_prop by wenhan on 2008-06-25 21:54:28 as **
  • Multiple testing in large-scale contingency tables: inferring patterns of pair-wise amino acid association in beta-sheets.
    International journal of bioinformatics research and applications, Vol. 2, No. 2. (2006), pp. 193-217.
    by SB Kim, KL Tsui, M Borodovsky
    posted to 200806_prop by wenhan on 2008-06-25 21:54:07 as **
  • Probabilistic models for biological sequences: selection and Maximum Likelihood estimation.
    International journal of bioinformatics research and applications, Vol. 2, No. 3. (2006), pp. 305-324.
    by S Ekisheva, M Borodovsky
    posted to 200806_prop by wenhan on 2008-06-25 21:53:48 as **
  • Convergence rate estimation for the TKF91 model of biological sequence length evolution.
    Mathematical biosciences, Vol. 209, No. 2. (October 2007), pp. 470-485.
    by AY Mitrophanov, M Borodovsky
    posted to 200806_prop by wenhan on 2008-06-25 21:52:01 as **
  • Exonization of the LTR transposable elements in human genome
    BMC Genomics, Vol. 8 (28 August 2007), 291.
    by Jittima Piriyapongsa, Nalini Polavarapu, Mark Borodovsky, John Mcdonald
    posted to 200806_prop by wenhan on 2008-06-25 21:51:41 as ** along with 3 people and 1 group cisevol yoanjacquemin FMoncini BergmanLab
  • Control of Streptococcus pyogenes virulence: modeling of the CovR/S signal transduction system.
    Journal of theoretical biology, Vol. 246, No. 1. (7 May 2007), pp. 113-128.
    by AY Mitrophanov, G Churchward, M Borodovsky
    posted to 200806_prop by wenhan on 2008-06-25 21:51:21 as **
  • Evaluating the protein coding potential of exonized transposable element sequences
    Biology Direct, Vol. 2 (26 November 2007), 31.
    by Jittima Piriyapongsa, Mark T Rutledge, Sanil Patel, Mark Borodovsky, King I Jordan
    posted to 200806_prop by wenhan on 2008-06-25 21:50:43 as ** along with 1 person and 1 group cisevol BergmanLab
  • Leaderless transcripts of the crenarchaeal hyperthermophile Pyrobaculum aerophilum.
    Journal of molecular biology, Vol. 309, No. 2. (1 June 2001), pp. 347-360.
    by MM Slupska, AG King, S Fitz-Gibbon, J Besemer, M Borodovsky, JH Miller
    posted to 200806_prop by wenhan on 2008-06-25 21:35:50 as **
  • Finding prokaryotic genes by the 'frame-by-frame' algorithm: targeting gene starts and overlapping genes.
    Bioinformatics (Oxford, England), Vol. 15, No. 11. (November 1999), pp. 874-886.
    by AM Shmatkov, AA Melikyan, FL Chernousko, M Borodovsky
    posted to 200806_prop by wenhan on 2008-06-25 21:34:41 as **
  • How to Interpret an Anonymous Bacterial Genome: Machine Learning Approach to Gene Identification
    Genome Res., Vol. 8, No. 11. (1 November 1998), pp. 1154-1171.
    by William S Hayes, Mark Borodovsky
    posted to 200806_prop by wenhan on 2008-06-25 16:55:22 as ** along with 1 person karfunkel
  • Titins in C.elegans with unusual features: coiled-coil domains, novel regulation of kinase activity and two new possible elastic regions.
    Journal of molecular biology, Vol. 323, No. 3. (25 October 2002), pp. 533-549.
    by DB Flaherty, KM Gernert, N Shmeleva, X Tang, KB Mercer, M Borodovsky, GM Benian
    posted to 200806_prop by wenhan on 2008-06-25 16:20:50 as ** along with 1 group MBLAB
  • Intrinsic and extrinsic approaches for detecting genes in a bacterial genome.
    Nucleic acids research, Vol. 22, No. 22. (11 November 1994), pp. 4756-4767.
    by M Borodovsky, KE Rudd, EV Koonin
    posted to 200806_prop by wenhan on 2008-06-24 23:29:58 as ** along with 1 group MBLAB
  • Gene identification in novel eukaryotic genomes by self-training algorithm
    Nucleic Acids Research, Vol. 33, No. 20. (2005), pp. 6494-6506.
    by Alexandre Lomsadze, Vardges Ter-Hovhannisyan, Yury O Chernoff, Mark Borodovsky
    posted to recent_genefinding 200806_prop by wenhan on 2008-02-25 20:35:52 as ** along with 1 person GustavoLacerda
  • GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005)
    by J Besemer, M Borodovsky
    posted to recent_genefinding 200806_prop by wenhan on 2008-02-25 17:56:42 as ** along with 2 people jmeppley GustavoLacerda
  • Problems and Solutions in Biological Sequence Analysis
    (11 September 2006)
    by Mark Borodovsky, Svetlana Ekisheva
    posted to metagenomics_0208 200806_prop by wenhan on 2008-02-14 20:17:32 as **
  • Heuristic approach to deriving models for gene finding.
    Nucleic Acids Res, Vol. 27, No. 19. (1 October 1999), pp. 3911-3920.
    by J Besemer, M Borodovsky
    posted to metagenomics_0208 by wenhan on 2008-02-14 19:47:11 as ** along with 4 people and 2 groups GustavoLacerda alexl azazello indigoviolet MBLAB EisenLab
  • GeneMark.hmm: new solutions for gene finding.
    Nucleic Acids Res, Vol. 26, No. 4. (15 February 1998), pp. 1107-1115.
    by AV Lukashin, M Borodovsky
    posted to metagenomics_0208 200806_prop by wenhan on 2008-02-14 19:39:22 as ** along with 1 person and 1 group indigoviolet EisenLab
  • GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions.
    Nucleic Acids Res, Vol. 29, No. 12. (15 June 2001), pp. 2607-2618.
    by J Besemer, A Lomsadze, M Borodovsky
    posted to metagenomics_0208 by wenhan on 2008-02-14 19:37:08 as ** along with 2 people and 1 group vwchan azazello beta
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/user/wenhan/author/Borodovsky

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