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stevanspringer selection [52 articles]

最近 stevanspringer さんのライブラリに追加された論文の中から タグ selection. You can also see everyone's selection.
  • Sexual Selection and the Adaptive Evolution of Mammalian Ejaculate Proteins
    Mol Biol Evol, Vol. 25, No. 1. (1 January 2008), pp. 207-219.
    by Steven A Ramm, Peter L Oliver, Chris P Ponting, Paula Stockley, Richard D Emes
    posted to selection reproduction mouse by stevanspringer on 2008-07-17 06:40:58 as ** along with 2 people balicea renatomilani
  • The McDonald-Kreitman Test and Slightly Deleterious Mutations
    Mol Biol Evol, Vol. 25, No. 6. (1 June 2008), pp. 1007-1015.
    by Jane Charlesworth, Adam Eyre-Walker
    posted to statistic selection population_genetics polymorphism by stevanspringer on 2008-05-10 00:26:20 as ** along with 4 people and 1 group gjuggler Stew cabbagesofdoom stajich Berkeley Mycology
  • Reproductive Protein Evolution
    Annual Review of Ecology and Systematics, Vol. 33 (2002), pp. 161-179.
    by WJ Swanson, VD Vacquier
    posted to gamete_recognition hypothesis reinforcement reproduction review selection sexual_conflict sexual_selection by stevanspringer on 2007-12-11 01:09:45 as **
  • Directed Mutagenesis Confirms the Functional Importance of Positively Selected Sites in Polygalacturonase Inhibitor Protein
    Molecular Biology and Evolution, Vol. 22, No. 7. (15 July 2005), pp. 1531-1534.
    by John G Bishop
    posted to function mutagenesis selection by stevanspringer on 2007-11-13 00:37:20 as ** along with 1 person BioNica
  • Exploring Variation in the d N /d S Ratio Among Sites and Lineages Using Mutational Mappings: Applications to the Influenza Virus
    Journal of Molecular Evolution, Vol. 65, No. 3. (2007), pp. 340-348.
    by Weiwei Zhai, Montgomery Slatkin, Rasmus Nielsen
    posted to ml mutation selection statistic vertebrate by stevanspringer on 2007-11-07 20:21:36 as ** along with 1 person smbe2008
  • Looking for Darwin in all the wrong places: the misguided quest for positive selection at the nucleotide sequence level
    Heredity, Vol. aop, No. current.
    by AL Hughes
    posted to selection summary by stevanspringer on 2007-09-26 22:59:17 as ** along with 1 person stajich
  • Multiple Hypothesis Testing to Detect Lineages Under Positive Selection that Affects Only a Few Sites.
    Mol Biol Evol (5 March 2007)
    by Maria Anisimova, Ziheng Yang
    posted to ml model selection by stevanspringer on 2007-05-09 06:22:12 as ** along with 2 people and 2 groups operon dpollard EisenLab FAB-lab
  • Statistical methods for detecting molecular adaptation.
    TRENDS IN ECOLOGY AND EVOLUTION, Vol. 15, No. 12. (1 December 2000), pp. 496-503.
    by Z Yang, JP Bielawski
    posted to ml review selection statistic by stevanspringer on 2007-05-03 18:34:39 as ** along with 2 people and 3 groups clearbluespring hdopazo Bioinformatics FAB-lab BioinfoCIPF
  • The Role of Population Size in Molecular Evolution
    Theoretical Population Biology, Vol. 55, No. 2. (April 1999), pp. 145-156.
    by John H Gillespie
    posted to model neutral population_genetics selection by stevanspringer on 2007-04-04 19:32:54 as ** along with 1 group FAB-lab
  • The Influence of Phylogenetic Uncertainty on the Detection of Positive Darwinian Selection
    Molecular Biology and Evolution, Vol. 23, No. 12. (15 December 2006), pp. 2274-2278.
    by Pie, R Marcio
    posted to ml phylogeny selection by stevanspringer on 2007-04-03 20:55:43 as ** along with 1 group FAB-lab
  • The relationship between the pleiotropic phenotypic effects of a mutation fixed by selection
    Heredity, Vol. aop, No. current.
    by CK Griswold,
    posted to adaptation model mutation pleiotropy selection by stevanspringer on 2007-04-03 20:42:04 as ** along with 1 group FAB-lab
  • Natural Selection for Variances in Offspring Numbers: A New Evolutionary Principle
    The American Naturalist, Vol. 111, No. 981. (1977), pp. 1010-1014.
    by John H Gillespie
    posted to model polymorphism selection by stevanspringer on 2007-03-15 18:59:30 as ** along with 1 group FAB-lab
  • Statistical Tests for Detecting Positive Selection by Utilizing High-Frequency Variants
    Genetics, Vol. 174, No. 3. (1 November 2006), pp. 1431-1439.
    by Kai Zeng, Yun-Xin Fu, Suhua Shi, Chung-I Wu
    posted to polymorphism selection statistic by stevanspringer on 2006-11-24 21:15:38 as ** along with 3 people and 2 groups operon ramensky dmc FAB-lab Durbin group
  • Being positive about selection.
    PLoS Biol, Vol. 4, No. 3. (March 2006)
    by C MacCallum, E Hill
    posted to selection summary by stevanspringer on 2006-05-17 23:19:10 as ** along with 5 people and 1 group operon balajis ejeffery BioNica JBEgwa01 FAB-lab
  • Sex-related genes, directional sexual selection, and speciation.
    Mol Biol Evol, Vol. 15, No. 7. (July 1998), pp. 901-909.
    by A Civetta, RS Singh
    posted to selection sexual_selection speciation by stevanspringer on 2006-03-25 20:12:09 as ** along with 1 group FAB-lab
  • Large-scale search for genes on which positive selection may operate.
    Mol Biol Evol, Vol. 13, No. 5. (May 1996), pp. 685-690.
    by T Endo, K Ikeo, T Gojobori
    posted to genome selection by stevanspringer on 2006-03-25 20:09:27 as ** along with 1 group FAB-lab
  • The proteins of linked genes evolve at similar rates.
    Nature, Vol. 407, No. 6806. (19 October 2000), pp. 900-903.
    by EJ Williams, LD Hurst
    posted to linkage selection by stevanspringer on 2006-03-10 20:35:43 as ** along with 2 people and 2 groups bjorns penka Nie FAB-lab
  • Site-to-Site Variation of Synonymous Substitution Rates
    Molecular Biology and Evolution, Vol. 22, No. 12. (December 2005), pp. 2375-2385.
    by Sergei K Pond, Spencer V Muse
    posted to ml selection by stevanspringer on 2006-03-10 04:17:32 as ** along with 2 people and 1 group operon tale FAB-lab
  • Detecting natural selection at the molecular level: a reexamination of some "classic" examples of adaptive evolution.
    J Mol Evol, Vol. 62, No. 2. (February 2006), pp. 176-195.
    by L Nunney, EL Schuenzel
    posted to ml selection by stevanspringer on 2006-03-08 21:35:37 as ** along with 1 group FAB-lab
  • Estimating Selection on Nonsynonymous Mutations
    Genetics, Vol. 172, No. 2. (1 February 2006), pp. 1079-1092.
    by Laurence Loewe, Brian Charlesworth, Carolina Bartolome, Veronique Noel
    posted to mutation population_genetics selection statistic by stevanspringer on 2006-03-03 06:13:28 as ** along with 1 person and 1 group BioNica FAB-lab
  • Enhanced adaptive evolution of sperm-expressed genes on the mammalian X chromosome
    Heredity, Vol. aop, No. current.
    by DG Torgerson, RS Singh,
    posted to chromosome selection sperm by stevanspringer on 2006-03-02 19:31:29 as ** along with 1 group FAB-lab
  • Why Sex?
    Science, Vol. 311, No. 5763. (17 February 2006), pp. 960-961.
    by Rasmus Nielsen
    posted to linkage recombination selection sex summary by stevanspringer on 2006-02-23 23:36:27 as ** along with 3 people and 3 groups dayjm dchughes cmm FAB-lab G4ID Genetics-of-Gambling
  • Genomic scans for selective sweeps using SNP data.
    Genome Res, Vol. 15, No. 11. (November 2005), pp. 1566-1575.
    by R Nielsen, S Williamson, Y Kim, MJ Hubisz, AG Clark, C Bustamante
    posted to genome selection snp by stevanspringer on 2006-02-21 21:52:24 as ** along with 4 people and 3 groups balajis ashandanj ramensky dmc Bioinformatics FAB-lab Durbin group
  • Limiting Relationships Between Selection and Recombination
    Bulletin of Mathematical Biology, Vol. 65, No. 1. (January 2003), pp. 129-141.
    by GA Fox, A Hastings
    posted to linkage model recombination selection by stevanspringer on 2006-02-13 05:27:38 as ** along with 1 group FAB-lab
  • Disequilibrium, selection and recombination: limits in two-locus, two-allele models
    Genetics, Vol. 98, No. 3. (1 July 1981), pp. 659-668.
    by Alan Hastings
    posted to linkage model recombination selection by stevanspringer on 2006-02-13 05:19:21 as ** along with 1 group FAB-lab
  • Are Human Brains Still Evolving? Brain Genes Show Signs of Selection
    Science, Vol. 309, No. 5741. (9 September 2005), pp. 1662-1663.
    by Michael Balter
    posted to brain selection summary by stevanspringer on 2006-02-07 05:27:01 as ** along with 5 people and 2 groups garyfeng Archaeogenetics cmm sprite echinotrix ReadingLab FAB-lab
  • Ongoing Adaptive Evolution of ASPM, a Brain Size Determinant in Homo sapiens
    Science, Vol. 309, No. 5741. (09 September 2005), pp. 1720-1722.
    by Nitzan Mekel-Bobrov, Sandra L Gilbert, Patrick D Evans, Eric J Vallender, Jeffrey R Anderson, Richard R Hudson, Sarah A Tishkoff, Bruce T Lahn
    posted to brain coalescent selection by stevanspringer on 2006-02-07 05:17:58 as ** along with 5 people and 1 group Wabin grzegorz JAShapiro balajis chrys FAB-lab
  • A New Method for Estimating Nonsynonymous Substitutions and Its Applications to Detecting Positive Selection
    Molecular Biology and Evolution, Vol. 23, No. 2. (20 February 2006), pp. 372-379.
    by Hua Tang, Chung-I Wu
    posted to ml selection by stevanspringer on 2006-02-01 22:09:04 as ** along with 1 person and 1 group akifumi FAB-lab
  • Non-Non-Darwinian Evolution [Non-Neutral Evolution., Brian Golding]
    Evolution, Vol. 50, No. 1. (1996), pp. 462-466.
    by A Berry
    posted to hypothesis neutral selection summary by stevanspringer on 2006-01-31 22:25:18 as ** along with 1 group FAB-lab
  • Germline Bottlenecks, Biparental Inheritance and Selection on Mitochondrial Variants: A Two-Level Selection Model
    Genetics, Vol. 170, No. 3. (1 July 2005), pp. 1385-1399.
    by Denis Roze, Francois Rousset, Yannis Michalakis
    posted to demography dui mitochondria model selection by stevanspringer on 2005-12-06 01:45:47 as ** along with 1 person and 1 group operon FAB-lab
  • Germline Bottlenecks and the Evolutionary Maintenance of Mitochondrial Genomes
    Genetics, Vol. 149, No. 4. (1 August 1998), pp. 2135-2146.
    by Carl T Bergstrom, Jonathan Pritchard
    posted to dui hypothesis mitochondria selection by stevanspringer on 2005-12-06 01:44:51 as ** along with 1 person and 1 group operon FAB-lab
  • On the Biological Significance of the Cost of Gene Substitution
    The American Naturalist, Vol. 105, No. 941. (1971), pp. 1-11.
    by Joseph Felsenstein
    posted to model selection by stevanspringer on 2005-12-06 01:36:23 as ** along with 1 group FAB-lab
  • Evaluation of an Improved Branch-Site Likelihood Method for Detecting Positive Selection at the Molecular Level
    Mol Biol Evol, Vol. 22, No. 12. (1 December 2005), pp. 2472-2479.
    by Jianzhi Zhang, Rasmus Nielsen, Ziheng Yang
    posted to ml model selection by stevanspringer on 2005-11-11 23:28:54 as ** along with 4 people and 1 group AaronDarling usagi-kirin Garamonfok mingzhi FAB-lab
  • A Bayesian Model Comparison Approach to Inferring Positive Selection
    Mol Biol Evol, Vol. 22, No. 12. (1 December 2005), pp. 2531-2540.
    by K Scheffler, C Seoighe
    posted to ml model selection by stevanspringer on 2005-11-11 23:28:14 as ** along with 2 people and 1 group operon BioNica FAB-lab
  • Human SNPs Reveal No Evidence of Frequent Positive Selection
    Mol Biol Evol, Vol. 22, No. 12. (1 December 2005), pp. 2504-2507.
    by Liqing Zhang, Wen-Hsiung Li
    posted to genome selection snp by stevanspringer on 2005-11-11 23:26:45 as ** along with 1 group FAB-lab
  • The Case for Selection at CCR5-Delta32.
    PLoS Biol, Vol. 3, No. 11. (1 November 2005)
    by Pardis C C Sabeti, Emily Walsh, Steve F F Schaffner, Patrick Varilly, Ben Fry, Holli B B Hutcheson, Mike Cullen, Tarjei S S Mikkelsen, Jessica Roy, Nick Patterson, Richard Cooper, David Reich, David Altshuler, Stephen Oʼbrien, Eric S S Lander
    posted to biogeography immunity selection by stevanspringer on 2005-11-03 03:31:47 as ** along with 2 people and 2 groups zukeboy indigoviolet EisenLab FAB-lab
  • A scan for positively selected genes in the genomes of humans and chimpanzees.
    PLoS Biol, Vol. 3, No. 6. (June 2005)
    by R Nielsen, C Bustamante, AG Clark, S Glanowski, TB Sackton, MJ Hubisz, A Fledel-Alon, DM Tanenbaum, D Civello, TJ White, J J Sninsky, MD Adams, M Cargill
    posted to apoptosis genome polymorphism selection by stevanspringer on 2005-10-26 05:36:41 as ** along with 6 people and 3 groups jwortman bpb penka hdopazo djkt iris42 Nie FAB-lab BioinfoCIPF
  • The Geographic Spread of the CCR5 Delta32 HIV-Resistance Allele.
    PLoS Biol, Vol. 3, No. 11. (18 October 2005)
    by John Novembre, Alison P P Galvani, Montgomery Slatkin
    posted to biogeography immunity selection by stevanspringer on 2005-10-25 22:14:39 as ** along with 2 people and 1 group Archaeogenetics joepickrell FAB-lab
  • The Units of Selection
    by RC Lewontin
    posted to hypothesis selection by stevanspringer on 2005-10-18 22:04:51 as ** along with 1 group FAB-lab
  • Parallel evolution of chimeric fusion genes.
    Proc Natl Acad Sci U S A, Vol. 102, No. 32. (9 August 2005), pp. 11373-11378.
    by CD Jones, DJ Begun
    posted to paralell selection by stevanspringer on 2005-09-29 16:49:04 as ** along with 1 person and 3 groups dchughes FAB-lab G4ID Genetics-of-Gambling
  • Maximum-likelihood methods for detecting recent positive selection and localizing the selected site in the genome.
    Genetics, Vol. 171, No. 1. (September 2005), pp. 377-384.
    by H Li, W Stephan
    posted to genome ml model selection by stevanspringer on 2005-09-29 04:46:53 as ** along with 1 group FAB-lab
  • Does natural selection promote population divergence? A comparative analysis of population structure using amplified fragment length polymorphism markers and quantitative traits.
    Mol Ecol, Vol. 11, No. 12. (December 2002), pp. 2583-2590.
    by T Steinger, P Haldimann, KA Leiss, H Müller-Schärer
    posted to population_genetics selection by stevanspringer on 2005-05-20 02:15:20 as ** along with 1 group FAB-lab
  • Bayes Empirical Bayes Inference of Amino Acid Sites Under Positive Selection.
    Mol Biol Evol, Vol. 22, No. 4. (April 2005), pp. 1107-1118.
    by Ziheng Yang, Wendy S W S Wong, Rasmus Nielsen
    posted to ml model selection by stevanspringer on 2005-05-20 02:05:37 as ** along with 1 group FAB-lab
  • How to use molecular marker data to measure evolutionary parameters in wild populations
    Molecular Ecology, Vol. 14, No. 7. (June 2005), pp. 1843-1859.
    by Dan Garant, Loeske E Kruuk
    posted to biogeography demography population_genetics selection by stevanspringer on 2005-05-19 21:00:23 as ** along with 1 group FAB-lab
  • Adaptive evolution of genes and gene families
    Current Opinion in Genetics & Development, Vol. 13, No. 6. (December 2003), pp. 617-622.
    by Willie J Swanson
    posted to adaptation reproduction review selection by stevanspringer on 2005-04-13 07:11:10 as ** along with 1 group FAB-lab
  • Positive Darwinian selection drives the evolution of several female reproductive proteins in mammals.
    Proc Natl Acad Sci U S A, Vol. 98, No. 5. (27 February 2001), pp. 2509-2514.
    by WJ Swanson, Z Yang, MF Wolfner, CF Aquadro
    posted to gamete_recognition reproduction selection by stevanspringer on 2005-03-31 23:48:50 as ** along with 1 group FAB-lab
  • A maximum likelihood method for detecting functional divergence at individual codon sites, with application to gene family evolution.
    J Mol Evol, Vol. 59, No. 1. (July 2004), pp. 121-132.
    by JP Bielawski, Z Yang
    posted to duplication ml selection by stevanspringer on 2005-03-29 21:17:30 as ** along with 1 person and 1 group skumagai FAB-lab
  • Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages.
    Mol Biol Evol, Vol. 19, No. 6. (June 2002), pp. 908-917.
    by Z Yang, R Nielsen
    posted to ml selection statistic by stevanspringer on 2005-03-29 21:17:00 as ** along with 3 people and 2 groups operon stajich Garamonfok FAB-lab Berkeley Mycology
  • Accuracy and power of the likelihood ratio test in detecting adaptive molecular evolution.
    Mol Biol Evol, Vol. 18, No. 8. (August 2001), pp. 1585-1592.
    by M Anisimova, JP Bielawski, Z Yang
    posted to ml selection by stevanspringer on 2005-03-29 21:16:42 as ** along with 1 person and 1 group ankur_iitg FAB-lab
  • Detecting amino acid sites under positive selection and purifying selection.
    Genetics (16 January 2005)
    by Tim Massingham, Nick Goldman
    posted to ml selection by stevanspringer on 2005-03-29 21:16:15 as ** along with 4 people and 1 group gjuggler operon BioNica Natasha FAB-lab
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