新規登録 | ログイン | FAQ      [?] 
Recent | Unread | Search | Authors | Tags | Export

sconlan library [40 articles]

最近 sconlan さんのライブラリ .
  • Genetic Determinants of Self Identity and Social Recognition in Bacteria
    Science, Vol. 321, No. 5886. (11 July 2008), pp. 256-259.
    by Karine A Gibbs, Mark L Urbanowski, Peter E Greenberg
    posted to bacteria ecology regulation toread by sconlan on 2008-07-28 14:14:22 as ** along with 2 people and 1 group stevanspringer kinestetika microbiology_nijmegen
  • FindPeaks 3.1: a tool for identifying areas of enrichment from massively parallel short-read sequencing technology
    Bioinformatics, Vol. 24, No. 15. (1 August 2008), pp. 1729-1730.
    by Anthony P Fejes, Gordon Robertson, Mikhail Bilenky, Richard Varhol, Matthew Bainbridge, Steven J Jones
    posted to alignment assembly chip-seq short-read toread by sconlan on 2008-07-22 14:01:49 as ** along with 4 people jfr reyez jyuh vega
  • Sequence-specific reconstruction from fragmentary databases using seed sequences: implementation and validation on SAGE, proteome and generic sequencing data
    Bioinformatics (9 June 2008), btn283.
    by Tiago J Sobreira, Arthur Gruber
    posted to algorithm alignment assembly metagenomics toread by sconlan on 2008-07-22 14:00:18 as ** along with 1 person Neeperando
  • Centroid estimation in discrete high-dimensional spaces with applications in biology
    Proceedings of the National Academy of Sciences, Vol. 105, No. 9. (4 March 2008), pp. 3209-3214.
    by Luis E Carvalho, Charles E Lawrence
    posted to centroid statistics by sconlan on 2008-07-21 13:56:10 as ** along with 1 person aitter
  • Identifying the conserved network of cis-regulatory sites of a eukaryotic genome
    PNAS, Vol. 102, No. 48. (29 November 2005), pp. 17400-17405.
    by Ting Wang, Gary D Stormo
    posted to _edc mammalian motif prediction regulation by sconlan on 2008-07-09 18:43:07 as ** along with 4 people and 2 groups tmmurali indigoviolet kaspermunch emilyhare Bioinformatics EisenLab
  • A systematic model to predict transcriptional regulatory mechanisms based on overrepresentation of transcription factor binding profiles.
    Genome Res, Vol. 16, No. 3. (March 2006), pp. 405-413.
    by LW Chang, R Nagarajan, JA Magee, J Milbrandt, GD Stormo
    posted to clustering _edc mammalian motif prediction regulation by sconlan on 2008-07-09 18:41:56 as ** along with 3 people jfr vega johncumbers
  • Statistical significance of cis-regulatory modules
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Dustin Schones, Andrew Smith, Michael Zhang
    posted to clustering _edc motif regulation statistics by sconlan on 2008-07-09 18:21:41 as ** along with 9 people and 1 group indigoviolet dpollard dquest sebastien_vigneau shigepong SeungjoonOh GustavoLacerda nklee xili03 EisenLab
  • Methods for calculating the probabilities of finding patterns in sequences.
    Comput Appl Biosci, Vol. 5, No. 2. (April 1989), pp. 89-96.
    by R Staden
    posted to algorithm _edc motif prediction statistics by sconlan on 2008-07-09 14:11:08 as ** along with 1 person emptyhb
  • A motif co-occurrence approach for genome-wide prediction of transcription-factor-binding sites in Escherichia coli.
    Genome Res, Vol. 14, No. 2. (February 2004), pp. 201-208.
    by ML Bulyk, AM McGuire, N Masuda, GM Church
    posted to bacteria _edc motif prediction regulation by sconlan on 2008-07-08 22:03:59 as ** along with 2 people LeightonP kaarsinogen
  • XcisClique: analysis of regulatory bicliques.
    BMC Bioinformatics, Vol. 7 (2006)
    by A Pati, C Vasquez-Robinet, LS Heath, R Grene, TM Murali
    posted to _edc mammalian microarray motif prediction regulation by sconlan on 2008-07-08 22:02:05 as ** along with 1 person and 1 group indigoviolet EisenLab
  • Predicting combinatorial binding of transcription factors to regulatory elements in the human genome by association rule mining
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Xochitl Morgan, Shulin Ni, Daniel Miranker, Vishwanath Iyer
    posted to _edc mammalian motif prediction regulation by sconlan on 2008-07-08 21:58:56 as ** along with 4 people maximilianh barriot idonaldson dps
  • Combining evidence using p-values: application to sequence homology searches.
    Bioinformatics, Vol. 14, No. 1. (1998), pp. 48-54.
    by TL Bailey, M Gribskov
    posted to motif prediction statistics by sconlan on 2008-07-08 21:45:08 as ** along with 1 person and 1 group indigoviolet EisenLab
  • Statistical significance for genomewide studies.
    Proc Natl Acad Sci U S A, Vol. 100, No. 16. (5 August 2003), pp. 9440-9445.
    by JD Storey, R Tibshirani
    posted to prediction statistics by sconlan on 2008-07-08 21:38:32 as ** along with 20 people and 1 group egreenfest jyuh textoris RMGraze jen_drake hggr frohike schuylrp grahamc incovoma kynn sancho 7ofAnn nicholso shikin wirawan BrianTomasik roys zhouyu bpcusack Bioinformatics
  • Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness.
    Applied and environmental microbiology, Vol. 71, No. 3. (March 2005), pp. 1501-1506.
    by PD Schloss, J Handelsman
    posted to 16s algorithm bacteria clustering otu phylogeny by sconlan on 2008-07-07 17:31:58 as ** along with 3 people and 1 group melissa_wos mcox djkt iSEEM
  • Introducing SONS, a tool for operational taxonomic unit-based comparisons of microbial community memberships and structures.
    Applied and environmental microbiology, Vol. 72, No. 10. (October 2006), pp. 6773-6779.
    by PD Schloss, J Handelsman
    posted to 16s algorithm clustering ecology environmental by sconlan on 2008-07-07 17:31:12 as ** along with 1 person and 1 group djkt iSEEM
  • UniFrac: a New Phylogenetic Method for Comparing Microbial Communities
    Appl. Environ. Microbiol., Vol. 71, No. 12. (1 December 2005), pp. 8228-8235.
    by Catherine Lozupone, Rob Knight
    posted to 16s algorithm clustering ecology environmental by sconlan on 2008-07-07 17:24:51 as ** along with 1 person and 1 group jdelcampo Microbial-Ecology
  • Efficient inference of bacterial strain trees from genome-scale multilocus data
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i123-131.
    by C Than, R Sugino, H Innan, L Nakhleh
    posted to bacteria phylogeny toread by sconlan on 2008-07-07 15:45:19 as **
  • Efficient algorithms for accurate hierarchical clustering of huge datasets: tackling the entire protein space
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i41-49.
    by Yaniv Loewenstein, Elon Portugaly, Menachem Fromer, Michal Linial
    posted to algorithm clustering toread by sconlan on 2008-07-07 15:42:41 as ** along with 5 people chad_davis isimpson druvus nklee nuin
  • Assessing the accuracy of prediction algorithms for classification: an overview
    Bioinformatics, Vol. 16, No. 5. (1 May 2000), pp. 412-424.
    by Pierre Baldi, Soren Brunak, Yves Chauvin, Claus A Andersen, Henrik Nielsen
    posted to algorithm prediction roc toread by sconlan on 2008-07-03 21:59:43 as *** along with 6 people chad_davis eckart_bindewald skrofej girschick Evangelia wenhan
  • MUSCLE: multiple sequence alignment with high accuracy and high throughput.
    Nucleic Acids Res, Vol. 32, No. 5. (2004), pp. 1792-1797.
    by RC Edgar
    posted to algorithm alignment by sconlan on 2008-07-03 21:48:50 as read along with 18 people and 2 groups sebk agustinarce fhsantanna nachtalp bpb chrn jwm Haggan sanchezbuelna timflutre olympos martainn edvin newton1234 skumagai bmaust dmp kcrawlik Radiation_Damage Stressosome
  • The language of genes
    Nature, Vol. 420, No. 6912. (14 November 2002), pp. 211-217.
    by David B Searls
    posted to algorithm chomsky genomics grammer linguistics by sconlan on 2008-07-03 21:47:06 as read along with 6 people and 3 groups garyfeng ataheri okarsligil bayesian vassilyl soramame_0518 ReadingLab plant-development Bioinformatics
  • Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
    Nature Methods, Vol. 5, No. 3. (10 February 2008), pp. 235-237.
    by Micah Hamady, Jeffrey J Walker, Kirk J Harris, Nicholas J Gold, Rob Knight
    posted to 454 algorithm barcode hamming metagenomics by sconlan on 2008-07-03 21:36:31 as read along with 2 people jyuh slevy03
  • The Checkerboard Score and Species Distributions
    Oecologia, Vol. 85, No. 1. (1990), pp. 74-79.
    by Lewi Stone, Alan Roberts
    posted to ecology by sconlan on 2008-07-03 21:34:15 as read
  • Evaluating different approaches that test whether microbial communities have the same structure.
    The ISME journal, Vol. 2, No. 3. (March 2008), pp. 265-275.
    by PD Schloss
    posted to 16s bacteria ecology metagenomics by sconlan on 2008-07-03 21:08:53 as ** along with 1 person and 1 group djkt iSEEM
  • Genetic analysis of Israel acute paralysis virus: distinct clusters are circulating in the United States.
    Journal of virology, Vol. 82, No. 13. (July 2008), pp. 6209-6217.
    by G Palacios, J Hui, PL Quan, A Kalkstein, KS Honkavuori, AV Bussetti, S Conlan, J Evans, YP Chen, D vanEngelsdorp, H Efrat, J Pettis, D Cox-Foster, EC Holmes, T Briese, WI Lipkin
    posted to self virus by sconlan on 2008-07-03 20:43:42 as read
  • A New Arenavirus in a Cluster of Fatal Transplant-Associated Diseases
    N Engl J Med, Vol. 358, No. 10. (6 March 2008), pp. 991-998.
    by Gustavo Palacios, Julian Druce, Lei Du, Thomas Tran, Chris Birch, Thomas Briese, Sean Conlan, Phenix-Lan Quan, Jeffrey Hui, John Marshall, Jan F Simons, Michael Egholm, Christopher D Paddock, Wun-Ju Shieh, Cynthia S Goldsmith, Sherif R Zaki, Mike Catton, Ian W Lipkin
    posted to 454 metagenomics self virus by sconlan on 2008-07-03 20:42:57 as read along with 1 person oelemento
  • Comprehensive viral oligonucleotide probe design using conserved protein regions.
    Nucleic acids research, Vol. 36, No. 1. (January 2008)
    by OJ Jabado, Y Liu, S Conlan, PL Quan, H Hegyi, Y Lussier, T Briese, G Palacios, WI Lipkin
    posted to microarray self virus by sconlan on 2008-07-03 20:42:17 as read
  • Using the Gibbs Motif Sampler for phylogenetic footprinting.
    Methods in molecular biology (Clifton, N.J.), Vol. 395 (2007), pp. 403-424.
    by W Thompson, S Conlan, LA McCue, CE Lawrence
    posted to gibbs self by sconlan on 2008-07-03 20:41:31 as read
  • A Metagenomic Survey of Microbes in Honey Bee Colony Collapse Disorder.
    Science (6 September 2007)
    by Diana L L Cox-Foster, Sean Conlan, Edward C C Holmes, Gustavo Palacios, Jay D D Evans, Nancy A A Moran, Phenix-Lan L Quan, Thomas Briese, Mady Hornig, David M M Geiser, Vince Martinson, Dennis Vanengelsdorp, Abby L L Kalkstein, Andrew Drysdale, Jeffrey Hui, Junhui Zhai, Liwang Cui, Stephen K K Hutchison, Jan Fredrik F Simons, Michael Egholm, Jeffery S S Pettis, W Ian I Lipkin
    posted to 454 bacteria metagenomics self virus by sconlan on 2008-07-03 20:41:07 as read along with 6 people and 3 groups jmeppley bluto carpi mellabee jlgreen hpaces Bioinformatics Green Lab iSEEM
  • Detection of respiratory viruses and subtype identification of influenza A viruses by GreeneChipResp oligonucleotide microarray.
    Journal of clinical microbiology, Vol. 45, No. 8. (August 2007), pp. 2359-2364.
    by PL Quan, G Palacios, OJ Jabado, S Conlan, DL Hirschberg, F Pozo, PJ Jack, D Cisterna, N Renwick, J Hui, A Drysdale, R Amos-Ritchie, E Baumeister, V Savy, KM Lager, JA Richt, DB Boyle, A García-Sastre, I Casas, P Perez-Breña, T Briese, WI Lipkin
    posted to microarray self virus by sconlan on 2008-07-03 20:39:30 as read
  • A phylogenetic Gibbs sampler that yields centroid solutions for cis regulatory site prediction.
    Bioinformatics (8 May 2007)
    by Lee A A Newberg, William A A Thompson, Sean Conlan, Thomas M M Smith, Lee Ann A McCue, Charles E E Lawrence
    posted to gibbs self by sconlan on 2008-07-03 20:38:42 as read along with 3 people and 1 group dpollard cjeans siebert EisenLab
  • The Gibbs Centroid Sampler.
    Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007)
    by WA Thompson, LA Newberg, S Conlan, LA McCue, CE Lawrence
    posted to gibbs self by sconlan on 2008-07-03 20:38:06 as read along with 2 people jmartin49 cabbagezs
  • Panmicrobial oligonucleotide array for diagnosis of infectious diseases.
    Emerging infectious diseases, Vol. 13, No. 1. (January 2007), pp. 73-81.
    by G Palacios, PL Quan, OJ Jabado, S Conlan, DL Hirschberg, Y Liu, J Zhai, N Renwick, J Hui, H Hegyi, A Grolla, JE Strong, JS Towner, TW Geisbert, PB Jahrling, C Büchen-Osmond, H Ellerbrok, MP Sanchez-Seco, Y Lussier, P Formenty, MS Nichol, H Feldmann, T Briese, WI Lipkin
    posted to microarray self virus by sconlan on 2008-07-03 20:36:51 as read
  • Software to perform automated comparisons of pair-wise percent identities for microbial species.
    BioTechniques, Vol. 40, No. 5. (May 2006)
    by S Conlan, LA McCue
    posted to self by sconlan on 2008-07-03 20:36:01 as read
  • Rhodopseudomonas palustris regulons detected by cross-species analysis of alphaproteobacterial genomes.
    Applied and environmental microbiology, Vol. 71, No. 11. (November 2005), pp. 7442-7452.
    by S Conlan, C Lawrence, LA McCue
    posted to bacteria environmental gibbs regulation self by sconlan on 2008-07-03 20:35:14 as read
  • Folding of a monomeric porin, OmpG, in detergent solution.
    Biochemistry, Vol. 42, No. 31. (12 August 2003), pp. 9453-9465.
    by S Conlan, H Bayley
    posted to ompg self by sconlan on 2008-07-03 20:33:49 as read
  • Biochemical and biophysical characterization of OmpG: A monomeric porin.
    Biochemistry, Vol. 39, No. 39. (3 October 2000), pp. 11845-11854.
    by S Conlan, Y Zhang, S Cheley, H Bayley
    posted to ompg self by sconlan on 2008-07-03 20:32:45 as read
  • A functional protein pore with a "retro" transmembrane domain.
    Protein science : a publication of the Protein Society, Vol. 8, No. 6. (June 1999), pp. 1257-1267.
    by S Cheley, O Braha, X Lu, S Conlan, H Bayley
    posted to a-hemolysin self by sconlan on 2008-07-03 20:32:13 as read
  • Stochastic sensing of organic analytes by a pore-forming protein containing a molecular adapter
    Nature, Vol. 398, No. 6729. (22 April 1999), pp. 686-690.
    by Li-Qun Gu, Orit Braha, Sean Conlan, Stephen Cheley, Hagan Bayley
    posted to a-hemolysin self by sconlan on 2008-07-03 20:31:40 as read along with 1 person thanatosmin
  • A diversity profile of the human skin microbiota.
    Genome research (23 May 2008)
    by Elizabeth A A Grice, Heidi H H Kong, Gabriel Renaud, Alice C C Young, , Gerard G G Bouffard, Robert W W Blakesley, Tyra G G Wolfsberg, Maria L L Turner, Julia A A Segre
    posted to 16s hmp metagenomics skin by sconlan on 2008-07-03 20:23:23 as ** along with 3 people and 1 group aprasad caseybrown djkt iSEEM
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/user/sconlan

    RIS BibTeX
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.