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rvosa inference [30 articles]

最近 rvosa さんのライブラリに追加された論文の中から タグ inference. You can also see everyone's inference.
  • Cases in which Parsimony or Compatibility Methods Will be Positively Misleading
    Systematic Zoology, Vol. 27, No. 4. (1978), pp. 401-410.
    by Joseph Felsenstein
    posted to phylogeny parsimony methods inference characters by rvosa on 2008-08-12 05:17:15 as ** along with 1 group FAB-lab
  • Phylogenetic Mixture Models Can Reduce Node-Density Artifacts
    Systematic Biology, Vol. 57, No. 2. (2008), pp. 286-293.
    by Chris Venditti, Andrew Meade, Mark Pagel
    posted to substitution-models sequence-evolution phylogeny models methods inference by rvosa on 2008-08-09 10:43:22 as ** along with 1 person and 1 group aprasad FAB-lab
  • Comparison between phylogeny of introns and exons in primates
    Chinese Science Bulletin, Vol. 44, No. 21. (1999), pp. 1940-1946.
    by N Wang, R Chen
    posted to animals evolution inference mammals phylogeny primates sequence-evolution substitution-models vertebrates by rvosa on 2008-02-07 00:05:51 as **
  • Bio::CDAT - An Object for Evolutionary Analysis of Data
    (2006)
    by A Stoltzfus, RA Vos, J Reese, W Qiu
    posted to alignment evolution inference phyloinformatics programming software by rvosa on 2008-02-07 00:05:48 as **
  • notes Inferring evolutionary processes from phylogenies
    Zoologica Scripta, Vol. 26, No. 4. (1997), pp. 331-348.
    by M Pagel
    posted to animals diversification evolution extinction inference methods models primates reconstruction vertebrates by rvosa on 2008-02-07 00:05:41 as **
  • notes Inferring population history from molecular phylogenies
    Philosophical Transactions of the Royal Society of London Series B, No. 349. (1995), pp. 25-31.
    by S Nee, EC Holmes, A Rambaut, PH Harvey
    posted to inference methods phylogeny population population-genetics by rvosa on 2008-02-07 00:05:39 as **
  • notes A Genetic Algorithm for Maximum-Likelihood Phylogeny Inference Using Nucleotide Sequence Data
    Molecular Biology and Evolution, Vol. 15, No. 3. (1998), pp. 277-283.
    by Paul O Lewis
    posted to algorithms inference likelihood methods phylogeny reconstruction by rvosa on 2008-02-07 00:05:34 as **
  • On the systematic status of the desert plated lizard (Angolosaurus skoogi): phylogenetic inference from DNA sequence analysis of the African Gerrhosauridae
    Biological Journal of the Linnean Society, Vol. 78, No. 2. (2003), pp. 253-262.
    by T Lamb, AM Meeker, AM Bauer, WR Branch
    posted to animals classification dna inference lizards phylogeny sequence vertebrates by rvosa on 2008-02-07 00:05:34 as **
  • PHYLIP - Phylogeny Inference Package (Version 3.2)
    Cladistics, Vol. 5 (1989), pp. 164-166.
    by Joseph Felsenstein
    posted to inference phylogeny software by rvosa on 2008-02-07 00:05:17 as **
  • On the rationale and utility of weighting nucleotide sequence data
    pp. 73-83.
    by Victor A Albert, Brent D Mishler
    posted to inference methods phylogeny weighting by rvosa on 2008-02-07 00:05:06 as **
  • Bayesian inference of character evolution
    Trends Ecol Evol (Amst), Vol. 19, No. 9. (Sep 2004), pp. 475-81.
    by Fredrik Ronquist
    posted to bayesian characters evolution inference by rvosa on 2008-01-30 08:07:14 as **
  • Bayesian Inference of Phylogeny and Its Impact on Evolutionary Biology
    Science, Vol. 294 (Jan 2001), pp. 2310-2314.
    by J Huelsenbeck, F Ronquist, R Nielsen, J Bollback
    posted to bayesian evolution inference phylogeny by rvosa on 2008-01-30 08:07:08 as **
  • Missing the forest for the trees: phylogenetic compression and its implications for inferring complex evolutionary histories
    Syst Biol, Vol. 54, No. 1. (2005), pp. 146-57.
    by Cécile Ané, Michael Sanderson
    posted to algorithms classification evolution genetics inference models phylogeny by rvosa on 2008-01-30 08:07:07 as **
  • Bayesian Coalescent Inference of Past Population Dynamics from Molecular Sequences
    Molecular Biology and Evolution (Jan 2005)
    by A Drummond, A Rambaut, B Shapiro, O Pybus
    posted to bayesian dna inference population sequence by rvosa on 2008-01-30 08:07:07 as **
  • Detecting the Node-Density Artifact in Phylogeny Reconstruction
    Systematic Biology, Vol. 55, No. 4. (August 2006), pp. 637-643.
    by Chris Venditti, Andrew Meade, Mark Pagel
    posted to algorithms clock-like divergence diversification inference likelihood phylogeny reconstruction substitution-models by rvosa on 2007-11-20 02:29:50 as **
  • Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference
    Bioinformatics, Vol. 20, No. 3. (12 February 2004), pp. 407-415.
    by Gautam Altekar, Sandhya Dwarkadas, John P Huelsenbeck, Fredrik Ronquist
    posted to algorithms bayesian inference phylogeny by rvosa on 2007-11-19 22:13:00 as **
  • Alu Elements and Hominid Phylogenetics
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 22. (2003), pp. 12787-12791.
    by Abdel-Halim Salem, David A Ray, Jinchuan Xing, Pauline A Callinan, Jeremy S Myers, Dale J Hedges, Randall K Garber, David J Witherspoon, Lynn B Jorde, Mark A Batzer
    posted to anthropology diversification inference phylogeny primates by rvosa on 2007-11-19 21:56:41 as **
  • Maximum Likelihood Trees from DNA Sequences: A Peculiar Statistical Estimation Problem
    Systematic Biology, Vol. 44, No. 3. (1995), pp. 384-399.
    by Ziheng Yang, Nick Goldman, Adrian Friday
    posted to clock-like inference likelihood phylogeny ratio-test statistics substitution-models by rvosa on 2007-11-19 21:52:03 as **
  • Accelerated likelihood surface exploration: the likelihood ratchet.
    Systematic Biology, Vol. 52, No. 3. (June 2003), pp. 368-373.
    by RA Vos
    posted to algorithms inference likelihood phylogeny software by rvosa on 2007-10-16 11:22:57 as read
  • Estimating the relative order of speciation or coalescence events on a given phylogeny
    Evolutionary Bioinformatics Online, Vol. 2 (27 Oct 2006), pp. 309-317.
    by Tanja Gernhard, Daniel Ford, Rutger Vos, Mike Steel
    posted to algorithms clock-like graph inference phylogeny reconstruction by rvosa on 2007-10-16 10:24:51 as read
  • Hedging Our Bets: The Expected Contribution of Species to Future Phylogenetic Diversity
    Evolutionary Bioinformatics, Vol. 3 (2007), pp. 237-244.
    by Mike Steel, Aki Mimoto, Arne Mooers
    posted to biodiversity conservation diversification inference phylogeny by rvosa on 2007-10-11 06:55:53 as **
  • Optimal Triangulations
    by Franz Aurenhammer, Yinfeng Xu
    posted to graph inference networks phylogeny algorithms by rvosa on 2005-10-14 00:49:18 as ** along with 1 group FAB-lab
  • Phylogenetic MCMC algorithms are misleading on mixtures of trees.
    Science, Vol. 309, No. 5744. (30 September 2005), pp. 2207-2209.
    by E Mossel, E Vigoda
    posted to algorithms bayesian inference likelihood markov-chains methods monte-carlo phylogeny by rvosa on 2005-10-13 22:44:38 as ** along with 1 group FAB-lab
  • Absolute diversification rates in angiosperm clades.
    Evolution Int J Org Evolution, Vol. 55, No. 9. (September 2001), pp. 1762-1780.
    by S Magallón, MJ Sanderson
    posted to clock-like comparative divergence diversification inference phylogeny reconstruction supertree by rvosa on 2005-10-13 13:03:24 as ** along with 1 group FAB-lab
  • The challenge of constructing large phylogenetic trees.
    Trends Plant Sci, Vol. 8, No. 8. (August 2003), pp. 374-379.
    by MJ Sanderson, AC Driskell
    posted to inference phylogeny supertree by rvosa on 2005-10-13 13:00:50 as ** along with 1 group FAB-lab
  • Performance of flip supertree construction with a heuristic algorithm.
    Syst Biol, Vol. 53, No. 2. (April 2004), pp. 299-308.
    by O Eulenstein, D Chen, JG Burleigh, D Fernández-Baca, MJ Sanderson
    posted to inference phylogeny supertree algorithms by rvosa on 2005-10-13 12:58:58 as ** along with 1 group FAB-lab
  • Assessing the quality of molecular divergence time estimates by fossil calibrations and fossil-based model selection.
    Philos Trans R Soc Lond B Biol Sci, Vol. 359, No. 1450. (29 October 2004), pp. 1477-1483.
    by TJ Near, MJ Sanderson
    posted to clock-like divergence fossils inference likelihood reconstruction substitution-models by rvosa on 2005-10-13 12:58:12 as ** along with 1 group FAB-lab
  • Prospects for building the tree of life from large sequence databases.
    Science, Vol. 306, No. 5699. (12 November 2004), pp. 1172-1174.
    by AC Driskell, C Ané, JG Burleigh, MM McMahon, BC O'meara, MJ Sanderson
    posted to data-mining inference phylogeny phyloinformatics by rvosa on 2005-10-13 12:57:20 as ** along with 1 group FAB-lab
  • MrBayes 3: Bayesian phylogenetic inference under mixed models.
    Bioinformatics, Vol. 19, No. 12. (12 August 2003), pp. 1572-1574.
    by F Ronquist, JP Huelsenbeck
    posted to bayesian inference likelihood phylogeny software by rvosa on 2005-10-12 21:40:43 as read along with 3 people and 1 group chrn spavey AaronDarling FAB-lab
  • MRBAYES: Bayesian inference of phylogenetic trees.
    Bioinformatics, Vol. 17, No. 8. (August 2001), pp. 754-755.
    by JP Huelsenbeck, F Ronquist
    posted to algorithms bayesian inference likelihood markov-chains monte-carlo phylogeny software by rvosa on 2005-10-12 21:40:08 as ** along with 4 people and 1 group bpb spavey AaronDarling CharlesM FAB-lab
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