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renatomilani library [315 articles]

最近 renatomilani さんのライブラリ (優先度順).
  • Experimental and bioinformatic approaches for interrogating protein-protein interactions to determine protein function
    J Mol Endocrinol, Vol. 34, No. 2. (1 April 2005), pp. 263-280.
    by Arnaud Droit, Guy G Poirier, Joanna M Hunter
    posted to protein network bioinformatics by renatomilani on 2008-06-20 19:15:53 as *****
  • Getting connected: analysis and principles of biological networks.
    Genes Dev, Vol. 21, No. 9. (1 May 2007), pp. 1010-1024.
    by X Zhu, M Gerstein, M Snyder
    posted to systems network bioinformatics by renatomilani on 2008-06-19 20:11:13 as ***** along with 9 people carlk jfr balajis grahamc fishtank nedwards naegele Evangelia kristen
  • High-throughput kinase profiling as a platform for drug discovery
    Nat Rev Drug Discov, Vol. 7, No. 5. (May 2008), pp. 391-397.
    by David M Goldstein, Nathanael S Gray, Patrick P Zarrinkar
    posted to kinase drug by renatomilani on 2008-04-30 19:23:47 as ***** along with 3 people Yanno superpyrin oelemento
  • Information quality in proteomics
    Brief Bioinform, Vol. 9, No. 2. (1 March 2008), pp. 174-188.
    by David A Stead, Norman W Paton, Paolo Missier, Suzanne M Embury, Cornelia Hedeler, Binling Jin, Alistair J Brown, Alun Preece
    posted to review proteome pipeline bioinformatics by renatomilani on 2008-04-29 19:53:13 as ***** along with 2 people alanrw neils
  • Protein kinase substrate identification on functional protein arrays
    BMC Biotechnology, Vol. 8 (28 February 2008), 22.
    by Lihao Meng, Gregory A Michaud, Janie S Merkel, Fang Zhou, Jing Huang, Dawn R Mattoon, Barry Schweitzer
    posted to kinase protein by renatomilani on 2008-02-29 14:52:36 as ***** along with 1 person jyuh
  • Targeting telomerase for cancer therapeutics
    British Journal of Cancer
    by JW Shay, WN Keith
    posted to cancer review telomere by renatomilani on 2008-02-19 15:29:33 as *****
  • KEGGanim: pathway animations for high-throughput data.
    Bioinformatics (1 December 2007)
    by Priit Adler, Jüri Reimand, Jürgen Jänes, Raivo Kolde, Hedi Peterson, Jaak Vilo
    posted to bioinformatics expression pathway by renatomilani on 2008-02-14 18:11:10 as ***** along with 4 people AlexanderPico jyuh jfr dullhunk
  • An Introduction to the Reactome Knowledgebase of Human Biological Pathways and Processes
    posted to annotation bioinformatics database metabolism pathway protein by renatomilani on 2008-02-13 01:22:23 as *****
  • The Implausibility of Metabolic Cycles on the Prebiotic Earth
    PLoS Biology, Vol. 6, No. 1. (1 January 2008), e18.
    by Leslie E Orgel
    posted to evolution metabolic by renatomilani on 2008-01-24 12:16:44 as ***** along with 2 people neils biomcgary
  • A map of human cancer signaling
    Mol Syst Biol, Vol. 3 (18 December 2007)
    by Qinghua Cui, Yun Ma, Maria Jaramillo, Hamza Bari, Arif Awan, Song Yang, Simo Zhang, Lixue Liu, Meng Lu, Maureen O'Connor-Mccourt, Enrico O Purisima, Edwin Wang
    posted to cancer signaling by renatomilani on 2007-12-18 17:21:38 as ***** along with 6 people frohike srp33 tmmurali ealloza cjeans Ema
  • Editorial: Focus Issue: The Kinome--Techniques and Methods for Analysis
    Science STKE, Vol. 2002, No. 162. (10 December 2002), 13.
    by LB Ray, NR Gough
    posted to methods kinome by renatomilani on 2008-05-16 20:24:28 as ****
  • Probing the kinome
    Nature Methods, Vol. 2, No. 3., pp. 225-232.
    by Laura Bonetta
    posted to methods kinome by renatomilani on 2008-05-16 20:16:03 as **** along with 1 person jyuh
  • Why have serine/threonine/tyrosine kinases been evolutionarily selected in eukaryotic signaling cascades?
    Computational biology and chemistry (23 February 2008)
    by Hyung-Seok S Choi, Jeong-Rae R Kim, Sang-Woo W Lee, Kwang-Hyun H Cho
    posted to signaling kinase evolution bioinformatics by renatomilani on 2008-07-03 15:38:52 as *** along with 1 person carmenv
  • BioBayes: A Software Package for Bayesian Inference in Systems Biology
    Bioinformatics (16 July 2008), btn338.
    by Vladislav Vyshemirsky, Mark Girolami
    posted to tool systems bayes by renatomilani on 2008-07-23 19:24:17 as **
  • WikiPathways: Pathway Editing for the People
    PLoS Biology, Vol. 6, No. 7. (1 July 2008), e184.
    by Alexander R Pico, Thomas Kelder, Martijn P van Iersel, Kristina Hanspers, Bruce R Conklin, Chris Evelo
    posted to tool pathway by renatomilani on 2008-07-23 19:17:46 as ** along with 4 people and 2 groups iBartomeus thomaskelder AlexanderPico cerami behavior_flexibility ConklinLab
  • BMP-2/4 and BMP-6/7 Differentially Utilize Cell Surface Receptors to Induce Osteoblastic Differentiation of Human Bone Marrow-derived Mesenchymal Stem Cells
    J. Biol. Chem., Vol. 283, No. 30. (25 July 2008), pp. 20948-20958.
    by Karen Lavery, Pamela Swain, Dean Falb, Moulay H Alaoui-Ismaili
    posted to receptor osteogenesis cell bone bmp by renatomilani on 2008-07-19 16:02:23 as **
  • Parasites lead to evolution of robustness against gene loss in host signaling networks
    Mol Syst Biol, Vol. 4 (15 July 2008)
    by Marcel Salathe, Orkun S Soyer
    posted to signaling parasite network evolution by renatomilani on 2008-07-16 21:13:21 as ** along with 2 people zwang jjray
  • Life Sciences and the web: a new era for collaboration
    Mol Syst Biol, Vol. 4 (1 July 2008)
    by Jonathan A Sagotsky, Le Zhang, Zhihui Wang, Sean Martin, Thomas S Deisboeck
    posted to web tool biology by renatomilani on 2008-07-16 21:11:43 as ** along with 5 people CameronNeylon tharris dullhunk neils reyez
  • The protist, Monosiga brevicollis, has a tyrosine kinase signaling network more elaborate and diverse than found in any known metazoan.
    Proceedings of the National Academy of Sciences of the United States of America (10 July 2008)
    by Gerard Manning, Susan L L Young, W Todd T Miller, Yufeng Zhai
    posted to kinase evolution by renatomilani on 2008-07-15 22:46:18 as ** along with 1 person manning
  • Unraveling Protein Networks with Power Graph Analysis
    PLoS Comput Biol, Vol. 4, No. 7. (11 July 2008), e1000108.
    by Loïc Royer, Matthias Reimann, Bill Andreopoulos, Michael Schroeder
    posted to tool protein network interaction graphs by renatomilani on 2008-07-15 21:16:44 as ** along with 14 people and 1 group lptolik MatthiasReimann jmuhlich AbnerCYH royerloic tmmurali stajich chad_davis askrajiv Borelli nuin reyez kengg Ema Berkeley Mycology
  • EVOLUTION: Modernizing the Modern Synthesis
    Science, Vol. 321, No. 5886. (11 July 2008), pp. 196-197.
    by Elizabeth Pennisi
    posted to evolution by renatomilani on 2008-07-15 19:23:22 as ** along with 1 person and 1 group stajich Berkeley Mycology
  • Computational modeling of the dynamics of the MAP kinase cascade activated by surface and internalized EGF receptors.
    Nat Biotechnol, Vol. 20, No. 4. (April 2002), pp. 370-375.
    by B Schoeberl, C Eichler-Jonsson, ED Gilles, G Müller
    posted to modelling map kinase bioinformatics by renatomilani on 2008-07-14 12:58:45 as ** along with 3 people lukaswindhager tuck sujaikumar
  • IBM RD 50-6 | Model-based design approaches in drug discovery: A parallel to traditional engineering approaches
    posted to network modelling drug by renatomilani on 2008-07-14 12:55:31 as **
  • ProteoWizard: Open Source Software for Rapid Proteomics Tools Development
    Bioinformatics (7 July 2008), btn323.
    by Darren Kessner, Matt Chambers, Robert Burke, David Agus, Parag Mallick
    posted to tool proteome by renatomilani on 2008-07-08 20:03:59 as ** along with 1 person groepl
  • InteroPorc: Automated Inference of Highly Conserved Protein Interaction Networks.
    Bioinformatics (Oxford, England) (28 May 2008)
    by Magali Michaut, Samuel Kerrien, Luisa Montecchi-Palazzi, Franck Chauvat, Corinne Cassier-Chauvat, Jean-Christophe C Aude, Pierre Legrain
    posted to tool protein interaction by renatomilani on 2008-07-07 16:14:08 as ** along with 3 people cerca neils cabbagesofdoom
  • Seeded Bayesian Networks: constructing genetic networks from microarray data
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Amira Djebbari, John Quackenbush
    posted to network microarray interaction data bayes by renatomilani on 2008-07-07 16:05:39 as ** along with 3 people jyuh phoenixzxl beete
  • Mapping the human protein interactome.
    Cell research (24 June 2008)
    by Daniel Figeys
    posted to protein interaction by renatomilani on 2008-07-07 03:38:15 as ** along with 1 person jyuh
  • Deducing topology of protein-protein interaction networks from experimentally measured sub-networks
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Ling Yang, Thomas Vondriska, Zhangang Han, Robb Maclellan, James Weiss, Zhilin Qu
    posted to protein network module interaction by renatomilani on 2008-07-04 18:49:31 as ** along with 2 people brianb neils
  • The Systems Biology Research Tool: evolvable open-source software
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Jeremiah Wright, Andreas Wagner
    posted to tool systems network interaction bioinformatics by renatomilani on 2008-07-03 20:56:35 as ** along with 3 people jyuh reyez bootsy
  • Construction of a cancer-perturbed protein-protein interaction network for discovery of apoptosis drug targets
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Liang H Chu, Bor S Chen
    posted to protein network interaction bioinformatics apoptosis by renatomilani on 2008-07-03 20:56:11 as ** along with 1 person reyez
  • Global investigation of protein-protein interactions in yeast Saccharomyces cerevisiae using re-occurring short polypeptide sequences
    Nucl. Acids Res. (27 June 2008), gkn390.
    by S Pitre, C North, M Alamgir, M Jessulat, A Chan, X Luo, JR Green, M Dumontier, F Dehne, A Golshani
    posted to protein interaction bioinformatics by renatomilani on 2008-07-03 20:55:51 as ** along with 3 people brianb pansapiens neils
  • Visualizing Global Properties of Large Complex Networks
    PLoS ONE, Vol. 3, No. 7. (2 July 2008), e2541.
    by Weijiang Li, Hiroyuki Kurata
    posted to tool network bioinformatics by renatomilani on 2008-07-03 19:29:45 as **
  • EVOLUTION: Building the Tree of Life, Genome by Genome
    Science, Vol. 320, No. 5884. (27 June 2008), pp. 1716-1717.
    by Elizabeth Pennisi
    posted to evolution by renatomilani on 2008-06-27 20:26:06 as ** along with 2 people gulsacan aprasad
  • DAnTE: a statistical tool for quantitative analysis of -omics data
    Bioinformatics (3 May 2008), btn217.
    by Ashoka D Polpitiya, Wei-Jun Qian, Navdeep Jaitly, Vladislav A Petyuk, Joshua N Adkins, David G Camp, Gordon A Anderson, Richard D Smith
    posted to tool methods data bioinformatics by renatomilani on 2008-06-27 16:20:58 as ** along with 2 people jyuh brianb
  • A Bayesian Estimator of Protein-Protein Association Probabilities
    Bioinformatics (22 May 2008), btn238.
    by JM Gilmore, DL Auberry, JL Sharp, AM White, KK Anderson, DS Daly
    posted to protein interaction bioinformatics bayes by renatomilani on 2008-06-27 16:19:39 as ** along with 2 people jyuh zwang
  • Characterization and prediction of residues determining protein functional specificity
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. 1473-1480.
    by John A Capra, Mona Singh
    posted to structure specificity protein function bioinformatics by renatomilani on 2008-06-27 16:18:12 as ** along with 1 person marck
  • Towards the use of argumentation in bioinformatics: a gene expression case study
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i304-312.
    by Kenneth Mcleod, Albert Burger
    posted to methods data bioinformatics argumentation by renatomilani on 2008-06-27 16:17:32 as ** along with 1 person dullhunk
  • Biomolecular network motif counting and discovery by color coding
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i241-249.
    by Noga Alon, Phuong Dao, Iman Hajirasouliha, Fereydoun Hormozdiari, Cenk S Sahinalp
    posted to network module bioinformatics by renatomilani on 2008-06-27 16:16:16 as **
  • Prediction of drug-target interaction networks from the integration of chemical and genomic spaces
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i232-240.
    by Yoshihiro Yamanishi, Michihiro Araki, Alex Gutteridge, Wataru Honda, Minoru Kanehisa
    posted to protein network interaction drug bioinformatics by renatomilani on 2008-06-27 16:15:31 as ** along with 1 person girschick
  • Identifying functional modules in protein-protein interaction networks: an integrated exact approach
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i223-231.
    by Marcus T Dittrich, Gunnar W Klau, Andreas Rosenwald, Thomas Dandekar, Tobias Muller
    posted to protein network module interaction bioinformatics by renatomilani on 2008-06-27 16:14:43 as ** along with 2 people chad_davis marck
  • Inferring differentiation pathways from gene expression
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i156-164.
    by Ivan G Costa, Stefan Roepcke, Christoph Hafemeister, Alexander Schliep
    posted to pathway gene expression bioinformatics by renatomilani on 2008-06-27 16:14:13 as ** along with 2 people balicea roys
  • Systems biology: Merging data means more powerful networks
    Nat Rev Genet, Vol. 9, No. 7. (July 2008), pp. 501-501.
    by Patrick Goymer
    posted to systems network data by renatomilani on 2008-06-27 16:13:41 as ** along with 3 people marck reyez kengg
  • Preparing for (and avoiding) the courtroom : Article : Bioentrepreneur
    posted to intellectual-property by renatomilani on 2008-06-27 02:35:23 as **
  • In silico activity profiling reveals the mechanism of action of antimalarials discovered in a high-throughput screen
    Proceedings of the National Academy of Sciences (25 June 2008), 0802982105.
    by David Plouffe, Achim Brinker, Case Mcnamara, Kerstin Henson, Nobutaka Kato, Kelli Kuhen, Advait Nagle, Francisco Adrian, Jason T Matzen, Paul Anderson, Tae-Gyu Nam, Nathanael S Gray, Arnab Chatterjee, Jeff Janes, Frank S Yan, Richard Trager, Jeremy S Caldwell, Peter G Schultz, Yingyao Zhou, Elizabeth A Winzeler
    posted to pathway network malaria bioinformatics by renatomilani on 2008-06-26 15:47:13 as **
  • Osprey: a network visualization system.
    Genome Biol, Vol. 4, No. 3. (2003)
    by BJ Breitkreutz, C Stark, M Tyers
    posted to tool pathway interaction bioinformatics by renatomilani on 2008-06-24 15:03:02 as ** along with 7 people and 1 group hryk djsaab tdent ianturton ganden Evangelia maralena CHISEL
  • The universal protein resource (UniProt).
    Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008)
    by
    posted to protein database bioinformatics by renatomilani on 2008-06-24 14:32:24 as ** along with 1 person jyuh
  • Comparative genomics of the eukaryotes.
    Science, Vol. 287, No. 5461. (24 March 2000), pp. 2204-2215.
    by GM Rubin, MD Yandell, JR Wortman, GL Gabor Miklos, CR Nelson, IK Hariharan, ME Fortini, PW Li, R Apweiler, W Fleischmann, JM Cherry, S Henikoff, MP Skupski, S Misra, M Ashburner, E Birney, MS Boguski, T Brody, P Brokstein, SE Celniker, SA Chervitz, D Coates, A Cravchik, A Gabrielian, RF Galle, WM Gelbart, RA George, LS Goldstein, F Gong, P Guan, NL Harris, BA Hay, RA Hoskins, J Li, Z Li, RO Hynes, SJ Jones, PM Kuehl, B Lemaitre, JT Littleton, DK Morrison, C Mungall, PH O'Farrell, OK Pickeral, C Shue, LB Vosshall, J Zhang, Q Zhao, XH Zheng, S Lewis
    posted to genome evolution by renatomilani on 2008-06-24 14:25:51 as ** along with 6 people CitoJam ujh jwortman rebeccahainess gurkanbebek cmor
  • Evolution of protein kinase signaling from yeast to man
    Trends in Biochemical Sciences, Vol. 27, No. 10. (1 October 2002), pp. 514-520.
    by Gerard Manning, Gregory D Plowman, Tony Hunter, Sucha Sudarsanam
    posted to kinome kinase evolution by renatomilani on 2008-06-24 14:22:46 as **
  • The sequence of the human genome.
    Science, Vol. 291, No. 5507. (16 February 2001), pp. 1304-1351.
    by JC Venter, MD Adams, EW Myers, PW Li, RJ Mural, GG Sutton, HO Smith, M Yandell, CA Evans, RA Holt, JD Gocayne, P Amanatides, RM Ballew, DH Huson, JR Wortman, Q Zhang, CD Kodira, XH Zheng, L Chen, M Skupski, G Subramanian, PD Thomas, J Zhang, GL Gabor Miklos, C Nelson, S Broder, AG Clark, J Nadeau, VA McKusick, N Zinder, AJ Levine, RJ Roberts, M Simon, C Slayman, M Hunkapiller, R Bolanos, A Delcher, I Dew, D Fasulo, M Flanigan, L Florea, A Halpern, S Hannenhalli, S Kravitz, S Levy, C Mobarry, K Reinert, K Remington, J Abu-Threideh, E Beasley, K Biddick, V Bonazzi, R Brandon, M Cargill, I Chandramouliswaran, R Charlab, K Chaturvedi, Z Deng, V Di Francesco, P Dunn, K Eilbeck, C Evangelista, AE Gabrielian, W Gan, W Ge, F Gong, Z Gu, P Guan, TJ Heiman, ME Higgins, RR Ji, Z Ke, KA Ketchum, Z Lai, Y Lei, Z Li, J Li, Y Liang, X Lin, F Lu, GV Merkulov, N Milshina, HM Moore, AK Naik, VA Narayan, B Neelam, D Nusskern, DB Rusch, S Salzberg, W Shao, B Shue, J Sun, Z Wang, A Wang, X Wang, J Wang, M Wei, R Wides, C Xiao, C Yan, A Yao, J Ye, M Zhan, W Zhang, H Zhang, Q Zhao, L Zheng, F Zhong, W Zhong, S Zhu, S Zhao, D Gilbert, S Baumhueter, G Spier, C Carter, A Cravchik, T Woodage, F Ali, H An, A Awe, D Baldwin, H Baden, M Barnstead, I Barrow, K Beeson, D Busam, A Carver, A Center, ML Cheng, L Curry, S Danaher, L Davenport, R Desilets, S Dietz, K Dodson, L Doup, S Ferriera, N Garg, A Gluecksmann, B Hart, J Haynes, C Haynes, C Heiner, S Hladun, D Hostin, J Houck, T Howland, C Ibegwam, J Johnson, F Kalush, L Kline, S Koduru, A Love, F Mann, D May, S McCawley, T McIntosh, I McMullen, M Moy, L Moy, B Murphy, K Nelson, C Pfannkoch, E Pratts, V Puri, H Qureshi, M Reardon, R Rodriguez, YH Rogers, D Romblad, B Ruhfel, R Scott, C Sitter, M Smallwood, E Stewart, R Strong, E Suh, R Thomas, NN Tint, S Tse, C Vech, G Wang, J Wetter, S Williams, M Williams, S Windsor, E Winn-Deen, K Wolfe, J Zaveri, K Zaveri, JF Abril, R Guigó, MJ Campbell, KV Sjolander, B Karlak, A Kejariwal, H Mi, B Lazareva, T Hatton, A Narechania, K Diemer, A Muruganujan, N Guo, S Sato, V Bafna, S Istrail, R Lippert, R Schwartz, B Walenz, S Yooseph, D Allen, A Basu, J Baxendale, L Blick, M Caminha, J Carnes-Stine, P Caulk, YH Chiang, M Coyne, C Dahlke, A Mays, M Dombroski, M Donnelly, D Ely, S Esparham, C Fosler, H Gire, S Glanowski, K Glasser, A Glodek, M Gorokhov, K Graham, B Gropman, M Harris, J Heil, S Henderson, J Hoover, D Jennings, C Jordan, J Jordan, J Kasha, L Kagan, C Kraft, A Levitsky, M Lewis, X Liu, J Lopez, D Ma, W Majoros, J McDaniel, S Murphy, M Newman, T Nguyen, N Nguyen, M Nodell, S Pan, J Peck, M Peterson, W Rowe, R Sanders, J Scott, M Simpson, T Smith, A Sprague, T Stockwell, R Turner, E Venter, M Wang, M Wen, D Wu, M Wu, A Xia, A Zandieh, X Zhu
    posted to genome by renatomilani on 2008-06-24 14:18:17 as ** along with 19 people and 3 groups granujilla Neeperando CitoJam frohike brant Cortel jwortman jnemecek bicko Dax42 yas balajis xdeupi arcticrasta dgront olympos incovoma naegele mimulus_99 Proteinkinases T_lab LabCompMed
  • A computational analysis of the protein-protein interaction networks in neurodegenerative diseases
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Joaquin Goni, Francisco Esteban, Nieves V de Mendizabal, Jorge Sepulcre, Sergio A Treijano, Ion Agirrezabal, Pablo Villoslada
    posted to protein network methods interaction bioinformatics by renatomilani on 2008-06-21 03:50:49 as ** along with 3 people AbnerCYH reyez bootsy
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