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oelemento library [118 articles]

最近 oelemento さんのライブラリ .
  • MicroRNAs: new regulators of immune cell development and function
    Nat Immunol, Vol. 9, No. 8. (2008), pp. 839-845.
    by David Baltimore, Mark P Boldin, Ryan M O'Connell, Dinesh S Rao, Konstantin D Taganov
    posted to micrornas immune_system by oelemento on 2008-07-21 16:25:45 as **
  • Evaluation of common gene expression patterns in the rat nervous system
    Physiol. Genomics, Vol. 16, No. 1. (16 December 2003), pp. 1-7.
    by Sergio Kaiser, Laura K Nisenbaum
    posted to rat gene_expression brain by oelemento on 2008-07-21 01:15:12 as **
  • A gene expression atlas of the central nervous system based on bacterial artificial chromosomes
    Nature, Vol. 425, No. 6961. (30 October 2003), pp. 917-925.
    by Shiaoching Gong, Chen Zheng, Martin L Doughty, Kasia Losos, Nicholas Didkovsky, Uta B Schambra, Norma J Nowak, Alexandra Joyner, Gabrielle Leblanc, Mary E Hatten, Nathaniel Heintz
    posted to mouse gene_expression egfp brain bac by oelemento on 2008-07-20 19:50:23 as **
  • notes Large-scale genomic approaches to brain development and circuitry.
    Annu Rev Neurosci, Vol. 28 (2005), pp. 89-108.
    by ME Hatten, N Heintz
    posted to mouse gene_expression brain by oelemento on 2008-07-18 23:24:04 as read along with 1 person timyu
  • notes Gene regulation and signal transduction in the immune system
    Genome Biology, Vol. 9 (10 July 2008), 315.
    by Tiffany Horng, Shalini Oberdoerffer, Anjana Rao
    posted to meeting_report immune_system gene_expression by oelemento on 2008-07-17 17:11:55 as read
  • Target Explorer: An automated tool for the identification of new target genes for a specified set of transcription factors.
    Nucleic acids research, Vol. 31, No. 13. (1 July 2003), pp. 3589-3592.
    by A Sosinsky, CP Bonin, RS Mann, B Honig
    posted to regulatory_elements columbia by oelemento on 2008-07-13 18:58:52 as ** along with 1 person wenhan
  • From components to regulatory motifs in signalling networks
    Brief Funct Genomic Proteomic, Vol. 5, No. 1. (1 March 2006), pp. 57-61.
    by Avi Ma'ayan, Ravi Iyengar
    posted to networks iyengar by oelemento on 2008-07-11 18:23:46 as **
  • Design Logic of a Cannabinoid Receptor Signaling Network That Triggers Neurite Outgrowth
    Science, Vol. 320, No. 5878. (16 May 2008), pp. 903-909.
    by Kenneth D Bromberg, Avi Ma'ayan, Susana R Neves, Ravi Iyengar
    posted to signaling_pathway networks mssm iyengar by oelemento on 2008-07-11 18:23:20 as ** along with 3 people AlexanderPico waszak caseybrown
  • Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells
    Nature Genetics, Vol. 37, No. 8. (10 July 2005), pp. 853-862.
    by Michael Weber, Jonathan J Davies, David Wittig, Edward J Oakeley, Michael Haase, Wan L Lam, Dirk Schübeler
    posted to methylation epigenomics cpg_island by oelemento on 2008-07-11 05:35:55 as ** along with 4 people vmsr slevy03 tabu epigenetics
  • CpG island methylation in human lymphocytes is highly correlated with DNA sequence, repeats, and predicted DNA structure.
    PLoS Genet, Vol. 2, No. 3. (March 2006)
    by C Bock, M Paulsen, S Tierling, T Mikeska, T Lengauer, J Walter
    posted to methylation epigenomics cpg_island by oelemento on 2008-07-11 05:28:09 as ** along with 5 people clearbluespring kaarsinogen eckart_bindewald olympos epigenetics
  • Formation of Regulatory Patterns During Signal Propagation in a Mammalian Cellular Network
    Science, Vol. 309, No. 5737. (12 August 2005), pp. 1078-1083.
    by Avi Ma'ayan, Sherry L Jenkins, Susana Neves, Anthony Hasseldine, Elizabeth Grace, Benjamin Dubin-Thaler, Narat J Eungdamrong, Gehzi Weng, Prahlad T Ram, Jeremy J Rice, Aaron Kershenbaum, Gustavo A Stolovitzky, Robert D Blitzer, Ravi Iyengar
    posted to signaling_pathway networks by oelemento on 2008-07-10 04:56:34 as ** along with 2 people xlli wnpx
  • A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis
    Nature Biotechnology, Vol. 26, No. 7. (08 July 2008), pp. 779-785.
    by Thomas A Down, Vardhman K Rakyan, Daniel J Turner, Paul Flicek, Heng Li, Eugene Kulesha, Stefan Gräf, Nathan Johnson, Javier Herrero, Eleni M Tomazou, Natalie P Thorne, Liselotte Bäckdahl, Marlis Herberth, Kevin L Howe, David K Jackson, Marcos M Miretti, John C Marioni, Ewan Birney, Tim JP Hubbard, Richard Durbin, Simon Tavaré, Stephan Beck
    posted to methylation methodology epigenomics by oelemento on 2008-07-09 16:42:03 as ** along with 3 people jyuh slevy03 bpcusack
  • Mechanisms of specificity in protein phosphorylation
    Nature Reviews Molecular Cell Biology, Vol. 8, No. 7., pp. 530-541.
    by Jeffrey A Ubersax, James E Ferrell
    posted to phosphorylation kinase by oelemento on 2008-07-09 04:38:26 as ** along with 3 people and 2 groups jyuh dchughes Evangelia G4ID Genetics-of-Gambling
  • notes Targets of the cyclin-dependent kinase Cdk1
    Nature, Vol. 425, No. 6960. (23 October 2003), pp. 859-864.
    by Jeffrey A Ubersax, Erika L Woodbury, Phuong N Quang, Maria Paraz, Justin D Blethrow, Kavita Shah, Kevan M Shokat, David O Morgan
    posted to kinase_assay kinase by oelemento on 2008-07-09 04:29:37 as read
  • From Structure to Function: Mapping the Connection Matrix of the Human Brain
    PLoS Biology, Vol. 6, No. 7. (1 July 2008), e164.
    by Liza Gross
    posted to neuroscience brain by oelemento on 2008-07-07 02:13:36 as ** along with 1 person AlexanderPico
  • Identifying protein-protein interactions in somatic hypermutation.
    The Journal of experimental medicine, Vol. 201, No. 4. (21 February 2005), pp. 493-496.
    by MF Goodman, MD Scharff
    posted to aid by oelemento on 2008-07-07 00:24:56 as **
  • notes Two levels of protection for the B cell genome during somatic hypermutation
    Nature, Vol. 451, No. 7180., pp. 841-845.
    by Man Liu, Jamie L Duke, Daniel J Richter, Carola G Vinuesa, Christopher C Goodnow, Steven H Kleinstein, David G Schatz
    posted to b_cells aid by oelemento on 2008-07-06 22:05:52 as read
  • The human transcriptome map reveals extremes in gene density, intron length, GC content, and repeat pattern for domains of highly and weakly expressed genes.
    Genome Res, Vol. 13, No. 9. (September 2003), pp. 1998-2004.
    by R Versteeg, BD van Schaik, MF van Batenburg, M Roos, R Monajemi, H Caron, HJ Bussemaker, AH van Kampen
    posted to human gene_expression by oelemento on 2008-07-06 21:40:42 as ** along with 3 people inesdesantiago JeffR100 jpoyatos
  • Short interspersed transposable elements (SINEs) are excluded from imprinted regions in the human genome.
    Proc Natl Acad Sci U S A, Vol. 99, No. 1. (8 January 2002), pp. 327-332.
    by JM Greally
    posted to epigenomics by oelemento on 2008-07-06 01:35:42 as ** along with 1 person N0131826
  • An Integrative Genomic and Epigenomic Approach for the Study of Transcriptional Regulation
    PLoS ONE, Vol. 3, No. 3. (26 March 2008), e1882.
    by Maria E Figueroa, Mark Reimers, Reid F Thompson, Kenny Ye, Yushan Li, Rebecca R Selzer, Jakob Fridriksson, Elisabeth Paietta, Peter Wiernik, Roland D Green, John M Greally, Ari Melnick
    posted to melnick epigenomics by oelemento on 2008-07-06 01:20:11 as **
  • The miR-200 family inhibits epithelial-mesenchymal transition and cancer cell migration by direct targeting of E-cadherin transcriptional repressors ZEB1 and ZEB2.
    The Journal of biological chemistry (14 April 2008)
    by Manav Korpal, Ester S S Lee, Guohong Hu, Yibin Kang
    posted to mirnas metastasis kang by oelemento on 2008-07-04 22:22:54 as ** along with 1 person jyuh
  • p53 Brings a New Twist to the Smad Signaling Network
    Sci. Signal., Vol. 1, No. 26. (1 July 2008), pe33.
    by Azeddine Atfi, Roland Baron
    posted to tgfbeta signaling_pathway p53 cancer by oelemento on 2008-07-04 20:03:11 as **
  • notes A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome
    Science (3 July 2008), 1160342.
    by Marc Sultan, Marcel H Schulz, Hugues Richard, Alon Magen, Andreas Klingenhoff, Matthias Scherf, Martin Seifert, Tatjana Borodina, Aleksey Soldatov, Dmitri Parkhomchuk, Dominic Schmidt, Sean O'Keeffe, Stefan Haas, Martin Vingron, Hans Lehrach, Marie-Laure Yaspo
    posted to rnaseq b_cells by oelemento on 2008-07-04 05:07:21 as read along with 7 people Ema kjglennie balicea GeeSharpMinor dh0000 caseybrown reyez
  • Constitutively activated STAT3 promotes cell proliferation and survival in the activated B-cell subtype of diffuse large B-cell lymphomas
    Blood, Vol. 111, No. 3. (1 February 2008), pp. 1515-1523.
    by Belinda B Ding, Jessica J Yu, Raymond Y Yu, Lourdes M Mendez, Rita Shaknovich, Yonghui Zhang, Giorgio Cattoretti, Hilda B Ye
    posted to stat3 bcl6 by oelemento on 2008-06-30 17:12:56 as **
  • STAT3-Mediated Up-Regulation of BLIMP1 Is Coordinated with BCL6 Down-Regulation to Control Human Plasma Cell Differentiation
    J Immunol, Vol. 180, No. 7. (1 April 2008), pp. 4805-4815.
    by Sean A Diehl, Heike Schmidlin, Maho Nagasawa, Simon D van Haren, Mark J Kwakkenbos, Etsuko Yasuda, Tim Beaumont, Ferenc A Scheeren, Hergen Spits
    posted to stat3 bcl6 by oelemento on 2008-06-30 17:12:31 as **
  • Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation.
    Nature genetics (22 June 2008)
    by Kristi Kerkel, Alexandra Spadola, Eric Yuan, Jolanta Kosek, Le Jiang, Eldad Hod, Kerry Li, Vundavalli V V Murty, Nicole Schupf, Eric Vilain, Mitzi Morris, Fatemeh Haghighi, Benjamin Tycko
    posted to methylation epigenomics by oelemento on 2008-06-28 20:07:24 as ** along with 2 people djkt rschulz
  • B cells: (micro)Restraint of AID
    Nat Rev Immunol, Vol. 8, No. 7. (July 2008), pp. 492-493.
    by Olive Leavy
    posted to mirnas b_cells aid by oelemento on 2008-06-25 17:13:36 as **
  • AID is required for germinal center–derived lymphomagenesis
    Nature Genetics, Vol. 40, No. 1. (09 December 2007), pp. 108-112.
    by Laura Pasqualucci, Govind Bhagat, Mila Jankovic, Mara Compagno, Paula Smith, Masamichi Muramatsu, Tasuku Honjo, Herbert C Morse, Michel C Nussenzweig, Riccardo Dalla-Favera
    posted to lymphoma b_cells by oelemento on 2008-06-23 01:29:30 as **
  • From bytes to bedside: data integration and computational biology for translational cancer research.
    PLoS Comput Biol, Vol. 3, No. 2. (23 February 2007)
    by JP Mathew, BS Taylor, GD Bader, S Pyarajan, M Antoniotti, AM Chinnaiyan, C Sander, SJ Burakoff, B Mishra
    posted to translational_research by oelemento on 2008-06-09 16:17:53 as ** along with 4 people frohike srp33 jfr kynn
  • A modular approach for integrative analysis of large-scale gene-expression and drug-response data
    Nature Biotechnology, Vol. 26, No. 5. (08 May 2008), pp. 531-539.
    by Zoltán Kutalik, Jacques S Beckmann, Sven Bergmann
    posted to gene_expression drug by oelemento on 2008-06-08 21:29:27 as ** along with 3 people ptrobajo stringertheory tmmurali
  • notes Variable Control of Ets-1 DNA Binding by Multiple Phosphates in an Unstructured Region
    Science, Vol. 309, No. 5731. (1 July 2005), pp. 142-145.
    by Miles A Pufall, Gregory M Lee, Mary L Nelson, Hyun-Seo Kang, Algirdas Velyvis, Lewis E Kay, Lawrence P Mcintosh, Barbara J Graves
    posted to transcription_factor ets by oelemento on 2008-06-08 19:16:07 as read
  • The oncoprotein LMO2 is expressed in normal germinal-center B cells and in human B-cell lymphomas
    Blood, Vol. 109, No. 4. (15 February 2007), pp. 1636-1642.
    by Yasodha Natkunam, Shuchun Zhao, David Y Mason, Jun Chen, Behnaz Taidi, Margaret Jones, Anne S Hammer, Hamilton, Izidore S Lossos, Ronald Levy
    posted to bcl6 by oelemento on 2008-06-08 17:26:36 as **
  • Metagene projection for cross-platform, cross-species characterization of global transcriptional states.
    Proc Natl Acad Sci U S A, Vol. 104, No. 14. (3 April 2007), pp. 5959-5964.
    by P Tamayo, D Scanfeld, BL Ebert, MA Gillette, CW Roberts, JP Mesirov
    posted to gsea gene_expression by oelemento on 2008-06-01 23:40:35 as ** along with 6 people nuin dragonrez jyuh jfr aviad_work ghattem
  • notes Transcriptional control of human p53-regulated genes
    Nat Rev Mol Cell Biol, Vol. 9, No. 5. (May 2008), pp. 402-412.
    by Todd Riley, Eduardo Sontag, Patricia Chen, Arnold Levine
    posted to p53 levine by oelemento on 2008-06-01 15:54:54 as ** along with 2 people lyndallsarkies cmzmasek
  • Promoter elements associated with RNA Pol II stalling in the Drosophila embryo
    Proceedings of the National Academy of Sciences (27 May 2008), 0802406105.
    by David A Hendrix, Joung-Woo Hong, Julia Zeitlinger, Daniel S Rokhsar, Michael S Levine
    posted to motifs drosophila by oelemento on 2008-05-28 09:50:44 as ** along with 1 person and 1 group cisevol BergmanLab
  • Gene expression signatures and small-molecule compounds link a protein kinase to Plasmodium falciparum motility
    Nat Chem Biol, Vol. 4, No. 6. (June 2008), pp. 347-356.
    by Nobutaka Kato, Tomoyo Sakata, Ghislain Breton, Karine G Le Roch, Advait Nagle, Carsten Andersen, Badry Bursulaya, Kerstin Henson, Jeffrey Johnson, Kota A Kumar, Felix Marr, Daniel Mason, Case Mcnamara, David Plouffe, Vandana Ramachandran, Muriel Spooner, Tove Tuntland, Yingyao Zhou, Eric C Peters, Arnab Chatterjee, Peter G Schultz, Gary E Ward, Nathanael Gray, Jeffrey Harper, Elizabeth A Winzeler
    posted to plasmodium malaria drug by oelemento on 2008-05-21 23:52:03 as ** along with 1 person renatomilani
  • Foxo1 directly regulates the transcription of recombination-activating genes during B cell development
    Nat Immunol, Vol. 9, No. 6. (June 2008), pp. 613-622.
    by Rupesh H Amin, Mark S Schlissel
    posted to b_cells by oelemento on 2008-05-19 21:50:24 as **
  • PLoS Pathogens: The Macaque Gut Microbiome in Health, Lentiviral Infection, and Chronic Enterocolitis
    posted to microbiome disease by oelemento on 2008-05-18 14:23:12 as **
  • Functional metagenomic profiling of nine biomes
    Nature (12 March 2008)
    by Elizabeth A Dinsdale, Robert A Edwards, Dana Hall, Florent Angly, Mya Breitbart, Jennifer M Brulc, Mike Furlan, Christelle Desnues, Matthew Haynes, Linlin Li, Lauren Mcdaniel, Mary A Moran, Karen E Nelson, Christina Nilsson, Robert Olson, John Paul, Beltran R Brito, Yijun Ruan, Brandon K Swan, Rick Stevens, David L Valentine, Rebecca V Thurber, Linda Wegley, Bryan A White, Forest Rohwer
    posted to microbiome by oelemento on 2008-05-16 18:14:01 as ** along with 9 people and 4 groups vaulot vrich jmeppley alexisfjdufresne bluto jyuh djkt neils kinestetika iSEEM Papers recommended by the Roscoff Plankton Group Microbial-Ecology microbiology_nijmegen
  • MLL protects CpG clusters from methylation within the Hoxa9 gene, maintaining transcript expression
    Proceedings of the National Academy of Sciences (15 May 2008), 0800090105.
    by Frank E Erfurth, Relja Popovic, Jolanta Grembecka, Tomasz Cierpicki, Catherine Theisler, Zhen-Biao Xia, Tara Stuart, Manuel O Diaz, John H Bushweller, Nancy J Zeleznik-Le
    posted to methylation gene_expression by oelemento on 2008-05-16 09:04:25 as **
  • Promoter polymorphism of the erythropoietin gene in severe diabetic eye and kidney complications
    Proceedings of the National Academy of Sciences, Vol. 105, No. 19. (13 May 2008), pp. 6998-7003.
    by Zongzhong Tong, Zhenglin Yang, Shrena Patel, Haoyu Chen, Daniel Gibbs, Xian Yang, Vincent S Hau, Yuuki Kaminoh, Jennifer Harmon, Erik Pearson, Jeanette Buehler, Yuhong Chen, Baifeng Yu, Nicholas H Tinkham, Norman A Zabriskie, Jiexi Zeng, Ling Luo, Jennifer K Sun, Manvi Prakash, Rola N Hamam, Stephen Tonna, Ryan Constantine, Cecinio C Ronquillo, Srinivas Sadda, Robert L Avery, John M Brand, Nyall London, Alfred L Anduze, George L King, Paul S Bernstein, Scott Watkins, Genetics, Lynn B Jorde, Dean Y Li, Lloyd P Aiello, Martin R Pollak, Kang Zhang
    posted to promoter_mutation by oelemento on 2008-05-14 01:37:05 as ** along with 3 people vassadda ykaminoh jyuh
  • Genetic regulators of large-scale transcriptional signatures in cancer
    Nature Genetics, Vol. 38, No. 4. (05 March 2006), pp. 421-430.
    by Adam S Adler, Meihong Lin, Hugo Horlings, Dimitry SA Nuyten, Marc J van de Vijver, Howard Y Chang
    posted to cancer by oelemento on 2008-05-11 19:30:25 as ** along with 5 people ihpark jfr tuck ccots Ao_Li2007
  • A network biology approach to prostate cancer
    Mol Syst Biol, Vol. 3 (13 February 2007)
    by Ayla Ergun, Carolyn A Lawrence, Michael A Kohanski, Timothy A Brennan, James J Collins
    posted to prostate_cancer by oelemento on 2008-05-11 19:15:30 as ** along with 4 people and 1 group kentsis jfr ealloza mikaelhuss BioinfoCIPF
  • Objective and automated protocols for the evaluation of biomedical search engines using No Title Evaluation protocols
    BMC Bioinformatics, Vol. 9 (29 February 2008), 132.
    by Fabien Campagne
    posted to trec cornell by oelemento on 2008-05-10 20:21:51 as ** along with 2 people irenas jyuh
  • Bench to bedside: BRCA: From therapeutic target to therapeutic shield
    Nature Medicine, Vol. 14, No. 5., pp. 495-496.
    by Neil P Shah
    posted to resistance cancer breast_cancer brca1 by oelemento on 2008-05-08 17:39:32 as **
  • notes Plasmodium falciparum virulence determinants unveiled
    Genome Biology, Vol. 3, No. 11. (2002), pp. reviews1031.1-reviews1031.4.
    by Brendan Crabb, Alan Cowman
    posted to var plasmodium by oelemento on 2008-05-06 17:32:44 as **
  • notes Molecular characterization of TMPRSS2-ERG gene fusion in the NCI-H660 prostate cancer cell line: a new perspective for an old model.
    Neoplasia (New York, N.Y.), Vol. 9, No. 3. (March 2007), pp. 200-206.
    by KD Mertz, SR Setlur, SM Dhanasekaran, F Demichelis, S Perner, S Tomlins, J Tchinda, B Laxman, RL Vessella, R Beroukhim, C Lee, AM Chinnaiyan, MA Rubin
    posted to prostate_cancer cancer by oelemento on 2008-05-05 05:03:57 as **
  • notes High-throughput kinase profiling as a platform for drug discovery
    Nat Rev Drug Discov, Vol. 7, No. 5. (May 2008), pp. 391-397.
    by David M Goldstein, Nathanael S Gray, Patrick P Zarrinkar
    posted to kinase drug_discovery by oelemento on 2008-05-05 01:08:39 as ** along with 3 people Yanno superpyrin renatomilani
  • notes A New Arenavirus in a Cluster of Fatal Transplant-Associated Diseases
    N Engl J Med, Vol. 358, No. 10. (6 March 2008), pp. 991-998.
    by Gustavo Palacios, Julian Druce, Lei Du, Thomas Tran, Chris Birch, Thomas Briese, Sean Conlan, Phenix-Lan Quan, Jeffrey Hui, John Marshall, Jan F Simons, Michael Egholm, Christopher D Paddock, Wun-Ju Shieh, Cynthia S Goldsmith, Sherif R Zaki, Mike Catton, Ian W Lipkin
    posted to infectious_diseases deep_sequencing by oelemento on 2008-05-05 00:53:41 as ** along with 1 person sconlan
  • A Single Nucleotide Polymorphism in the E-cadherin Gene Promoter Alters Transcriptional Activities
    Cancer Res, Vol. 60, No. 4. (1 February 2000), pp. 873-876.
    by Long-Cheng Li, Richard M Chui, Masahiro Sasaki, Koichi Nakajima, Geetha Perinchery, Harry C Au, Dana Nojima, Peter Carroll, Rajvir Dahiya
    posted to promoter mutation e-cadherin by oelemento on 2008-05-04 22:51:00 as **
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