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noano library [36 articles]

最近 noano さんのライブラリ .
  • notes From promoter sequence to expression: A probabilistic framework
    (2002)
    by E Segal, Y Barash, I Simon, N Friechnan, D Koller
    posted to binding expression integrative motif sequence stochastic by noano on 2006-07-01 09:25:33 as read along with 2 people lyongu wnpx
  • notes Decomposing gene expression into cellular processes.
    Pac Symp Biocomput (2003), pp. 89-100.
    by E Segal, A Battle, D Koller
    posted to expression modules networks by noano on 2006-07-01 09:22:45 as read along with 2 people frohike wnpx
  • Genomic regulatory networks and animal development.
    Dev Cell, Vol. 9, No. 4. (October 2005), pp. 449-462.
    by A Stathopoulos, M Levine
    posted to development regulation review by noano on 2006-06-30 10:27:57 as *** along with 3 people dquest postrational josepe
  • Prediction of regulatory modules comprising microRNAs and target genes.
    Bioinformatics, Vol. 21 Suppl 2 (1 September 2005)
    by S Yoon, G De Micheli
    posted to microrna modules regulation by noano on 2006-06-30 10:26:33 as *** along with 3 people and 1 group eckart_bindewald mortenlindow maralena microRNA
  • Causal Protein-Signaling Networks Derived from Multiparameter Single-Cell Data
    Science, Vol. 308, No. 5721. (22 April 2005), pp. 523-529.
    by Karen Sachs, Omar Perez, Dana Pe'er, Douglas A Lauffenburger, Garry P Nolan
    posted to networks pathways yeast by noano on 2006-06-30 10:24:19 as read along with 12 people and 1 group kentsis kaarsinogen balajis rand_bayes ryang wnpx os252 j3xucite koller jhatrimatri cdppublications lp2 CDP
  • A network-based analysis of systemic inflammation in humans
    Nature (31 August 2005)
    by Steve E Calvano, Wenzhong Xiao, Daniel R Richards, Ramon M Felciano, Henry V Baker, Raymond J Cho, Richard O Chen, Bernard H Brownstein, Perren J Cobb, Kevin S Tschoeke, Carol Miller-Graziano, Lyle L Moldawer, Michael N Mindrinos, Ronald W Davis, Ronald G Tompkins, Stephen F Lowry, Inflammation
    posted to expression human immunology inflammation by noano on 2006-06-30 10:08:51 as read along with 12 people and 1 group beapen jyuh textoris tuck VCKALIA nknii juliajumeau maryee lhonigberg grahamc massivemayhem karfunkel TCR_Signaling
  • Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae
    Journal of Biology, Vol. 5, No. 4. (08 June 2006), 11.
    by Teresa Reguly, Ashton Breitkreutz, Lorrie Boucher, Bobby-Joe Breitkreutz, Gary C Hon, Chad L Myers, Ainslie Parsons, Helena Friesen, Rose Oughtred, Amy Tong, Chris Stark, Yuen Ho, David Botstein, Brenda Andrews, Charles Boone, Olga G Troyanskya, Trey Ideker, Kara Dolinski, Nizar N Batada, Mike Tyers
    posted to interactions physical proteins yeast by noano on 2006-06-30 10:06:17 as *** along with 17 people and 3 groups chasmand snuppepuppan tmmurali lfriedl balajis wnpx nickluscombe egralla citecat koller grahamc iris_2001 sgoetz shikin s041629 pmendes mtruksa kdl EBI-regulation GeneGo
  • Lefty antagonism of Squint is essential for normal gastrulation.
    Curr Biol, Vol. 12, No. 24. (23 December 2002), pp. 2129-2135.
    by B Feldman, ML Concha, L Saúde, MJ Parsons, RJ Adams, SW Wilson, DL Stemple
    posted to development zebrafish by noano on 2006-06-29 10:01:51 as read
  • Towards a proteome-scale map of the human protein–protein interaction network
    Nature (28 September 2005)
    by Jean-François Rual, Kavitha Venkatesan, Tong Hao, Tomoko Hirozane-Kishikawa, Amélie Dricot, Ning Li, Gabriel F Berriz, Francis D Gibbons, Matija Dreze, Nono Ayivi-Guedehoussou, Niels Klitgord, Christophe Simon, Mike Boxem, Stuart Milstein, Jennifer Rosenberg, Debra S Goldberg, Lan V Zhang, Sharyl L Wong, Giovanni Franklin, Siming Li, Joanna S Albala, Janghoo Lim, Carlene Fraughton, Estelle Llamosas, Sebiha Cevik, Camille Bex, Philippe Lamesch, Robert S Sikorski, Jean Vandenhaute, Huda Y Zoghbi, Alex Smolyar, Stephanie Bosak, Reynaldo Sequerra, Lynn Doucette-Stamm, Michael E Cusick, David E Hill, Frederick P Roth, Marc Vidal
    posted to human interactions physical proteins by noano on 2006-06-29 10:01:06 as read along with 18 people and 2 groups ksiek csanford dragonrez kuhn okarsligil jfr lyongu maryee benny wnpx yoh gurkanbebek mbeautru eukfn grahamc lpfernandes antonkratz Evangelia Bioinformatics ParkinsonLab_at_MaRS
  • Modeling and simulation of genetic regulatory systems: a literature review.
    J Comput Biol, Vol. 9, No. 1. (2002), pp. 67-103.
    by H de Jong
    posted to biology modeling regulation review system by noano on 2006-06-29 10:00:01 as read along with 14 people and 3 groups phoenixzxl eldan tmmurali bayesian balicea Happybene wnpx kengg sstoma josepe dagmar jo_davies roys maburkitt VirtualPlants Plantandetc compneur
  • Bayesian network approach to cell signaling pathway modeling.
    Sci STKE, Vol. 2002, No. 148. (3 September 2002)
    by K Sachs, D Gifford, T Jaakkola, P Sorger, DA Lauffenburger
    posted to bayesian networks transcription by noano on 2006-06-29 09:37:20 as read along with 2 people dragonrez wnpx
  • Regulatory Blueprint for a Chordate Embryo
    Science, Vol. 312, No. 5777. (26 May 2006), pp. 1183-1187.
    by Kaoru S Imai, Michael Levine, Nori Satoh, Yutaka Satou
    posted to development expression by noano on 2006-06-29 09:35:54 as read along with 4 people and 2 groups dquest emilyhare nirfriedman nickluscombe EisenLab EBI-regulation
  • A data integration methodology for systems biology.
    Proc Natl Acad Sci U S A (21 November 2005)
    by Daehee Hwang, Alistair G G Rust, Stephen Ramsey, Jennifer J J Smith, Deena M M Leslie, Andrea D D Weston, Pedro de Atauri, John D D Aitchison, Leroy Hood, Andrew F F Siegel, Hamid Bolouri
    posted to biology integrative review system by noano on 2006-06-29 09:33:56 as *** along with 17 people and 3 groups brian tmmurali dragonrez okarsligil jfr lfriedl Schmidtc eweaver wnpx biosv Sharpshoot mbeautru reidy grahamc GeeSharpMinor nedwards athleem kdl Bioinformatics JJJ
  • The value of prior knowledge in discovering motifs with MEME.
    Proc Int Conf Intell Syst Mol Biol, Vol. 3 (1995), pp. 21-29.
    by TL Bailey, C Elkan
    posted to binding motif sequence by noano on 2006-06-29 09:31:19 as read along with 1 person AaronDarling
  • The Widespread Impact of Mammalian MicroRNAs on mRNA Repression and Evolution.
    Science (24 November 2005)
    by Kyle Kai-How K Farh, Andrew Grimson, Calvin Jan, Benjamin P P Lewis, Wendy K K Johnston, Lee P P Lim, Christopher B B Burge, David P P Bartel
    posted to microrna by noano on 2006-06-29 09:29:40 as read along with 12 people and 4 groups jerlich mfenner aprasad dayjm marcius eckart_bindewald dpollard mortenlindow mtagaya lp2 heliopais Alexander_Kanitz EisenLab microRNA BioinfoCIPF SGU-CIPF
  • Predicting gene expression from sequence.
    Cell, Vol. 117, No. 2. (16 April 2004), pp. 185-198.
    by MA Beer, S Tavazoie
    posted to bayesian binding expression motif networks sequence by noano on 2006-06-29 09:27:28 as read along with 8 people and 4 groups klo ana xwbcn adepace nickluscombe koller jrest phoenixzxl structural_bioinformatics Bioinformatics EisenLab EBI-regulation
  • Genetic variation in human gene expression.
    Mamm Genome (12 June 2006)
    by Emmanouil T Dermitzakis, Barbara E Stranger
    posted to expression genotype hapmap snps by noano on 2006-06-29 09:25:22 as **** along with 3 people and 2 groups dpollard cmm djkt EisenLab FAB-lab
  • Genome-wide associations of gene expression variation in humans.
    PLoS Genet, Vol. 1, No. 6. (December 2005)
    by BE Stranger, MS Forrest, AG Clark, MJ Minichiello, S Deutsch, R Lyle, S Hunt, B Kahl, SE Antonarakis, S Tavaré, P Deloukas, ET Dermitzakis
    posted to expression genotype hapmap snps by noano on 2006-06-29 09:24:05 as read along with 7 people and 3 groups shikin adepace rdiaz qfwills ashandanj jo_davies cisevol Bioinformatics EisenLab cis-regulatory-evolution
  • PhyloGibbs: A Gibbs Sampling Motif Finder That Incorporates Phylogeny.
    PLoS Comput Biol, Vol. 1, No. 7. (December 2005)
    by R Siddharthan, ED Siggia, E van Nimwegen
    posted to binding motif phylogenetics sequence by noano on 2006-06-29 09:22:29 as read along with 11 people and 3 groups isimpson ana postrational dquest AaronDarling nickluscombe adsmitty lusk lilou idonaldson yevishere structural_bioinformatics Bioinformatics EBI-regulation
  • Estimating gene regulatory networks and protein-protein interactions of Saccharomyces cerevisiae from multiple genome-wide data.
    Bioinformatics, Vol. 21 Suppl 2 (1 September 2005)
    by N Nariai, Y Tamada, S Imoto, S Miyano
    posted to bayesian expression integrative interactions physical yeast by noano on 2006-06-29 09:11:21 as read along with 2 people wnpx koller
  • Proteome survey reveals modularity of the yeast cell machinery
    Nature (22 January 2006)
    by Anne-Claude Gavin, Patrick Aloy, Paola Grandi, Roland Krause, Markus Boesche, Martina Marzioch, Christina Rau, Lars J Jensen, Sonja Bastuck, Birgit Dümpelfeld, Angela Edelmann, Marie-Anne Heurtier, Verena Hoffman, Christian Hoefert, Karin Klein, Manuela Hudak, Anne-Marie Michon, Malgorzata Schelder, Markus Schirle, Marita Remor, Tatjana Rudi, Sean Hooper, Andreas Bauer, Tewis Bouwmeester, Georg Casari, Gerard Drewes, Gitte Neubauer, Jens M Rick, Bernhard Kuster, Peer Bork, Robert B Russell, Giulio Superti-Furga
    posted to complex interactions physical proteins by noano on 2006-06-29 09:07:38 as read along with 22 people and 10 groups ellakat frohike carlk Yanno ana Borelli lfriedl ccots jmeppley chad_davis balajis xico shantanu nirfriedman balabu dgront koller ruvido nicoleq lpfernandes phoenixzxl larsjuhljensen structural_bioinformatics kdl MathBio Biostatistics Bioinformatics microRNA Computational_Systems_Biology EvolutionaryComputation Computational-Neurobiology WetBiology
  • Discovering regulatory and signalling circuits in molecular interaction networks.
    Bioinformatics, Vol. 18 Suppl 1 (2002)
    by T Ideker, O Ozier, B Schwikowski, AF Siegel
    posted to expression interactions networks by noano on 2006-06-29 09:06:47 as read along with 6 people and 2 groups carlk dragonrez okarsligil lfriedl koller frohike kdl Bioinformatics
  • Assessing computational tools for the discovery of transcription factor binding sites
    Nature Biotechnology, Vol. 23, No. 1. (06 January 2005), pp. 137-144.
    by Martin Tompa, Nan Li, Timothy L Bailey, George M Church, Bart D De Moor, Eleazar Eskin, Alexander V Favorov, Martin C Frith, Yutao Fu, James J Kent, Vsevolod J Makeev, Andrei A Mironov, William S Noble, Giulio Pavesi, Graziano Pesole, Mireille Régnier, Nicolas Simonis, Saurabh Sinha, Gert Thijs, Jacques v van Helden, Mathias Vandenbogaert, Zhiping Weng, Christopher Workman, Chun Ye, Zhou Zhu
    posted to binding comparison motif sequence by noano on 2006-06-29 09:05:44 as read along with 23 people and 6 groups nuin ep161302 icases ana barry aalibes aprasad jfr tuck chad_davis lyongu tabu dquest neveaire ranb johncumbers xiaobeizhao olympos GustavoLacerda nklee mdimon dandaman vietanh0 structural_bioinformatics Biostatistics Computational-Genomics Bioinformatics Neuroscience TNT
  • Physical network models.
    J Comput Biol, Vol. 11, No. 2-3. (2004), pp. 243-262.
    by CH Yeang, T Ideker, T Jaakkola
    posted to bayesian expression integrative interactions networks physical by noano on 2006-06-29 09:04:18 as read along with 3 people tmmurali wnpx koller
  • Signaling and circuitry of multiple MAPK pathways revealed by a matrix of global gene expression profiles.
    Science, Vol. 287, No. 5454. (4 February 2000), pp. 873-880.
    by CJ Roberts, B Nelson, MJ Marton, R Stoughton, MR Meyer, HA Bennett, YD He, H Dai, WL Walker, TR Hughes, M Tyers, C Boone, SH Friend
    posted to expression mapk pathway yeast by noano on 2006-06-29 09:02:49 as read along with 3 people carlk nirfriedman koller
  • Computational discovery of transcriptional regulatory rules.
    Bioinformatics, Vol. 21 Suppl 2 (1 September 2005)
    by TH Pham, JC Clemente, K Satou, TB Ho
    posted to expression logical modules by noano on 2006-06-29 09:01:44 as read
  • Using graphical models and genomic expression data to statistically validate models of genetic regulatory networks.
    Pac Symp Biocomput (2001), pp. 422-433.
    by AJ Hartemink, DK Gifford, TS Jaakkola, RA Young
    posted to bayesian expression networks by noano on 2006-06-29 09:00:16 as read along with 2 people brl wnpx
  • Combining location and expression data for principled discovery of genetic regulatory network models.
    Pac Symp Biocomput (2002), pp. 437-449.
    by AJ Hartemink, DK Gifford, TS Jaakkola, RA Young
    posted to bayesian expression location networks by noano on 2006-06-29 08:56:32 as read along with 5 people brl ldfu wnpx frohike naegele
  • Discovering molecular pathways from protein interaction and gene expression data.
    Bioinformatics, Vol. 19 Suppl 1 (2003)
    by E Segal, H Wang, D Koller
    posted to bayesian expression interactions physical by noano on 2006-06-29 08:55:15 as read along with 6 people and 1 group jfr lfriedl wnpx bhaddow edwardmorrissey jiny kdl
  • Using protein-protein interactions for refining gene networks estimated from microarray data by Bayesian networks.
    Pac Symp Biocomput (2004), pp. 336-347.
    by N Nariai, S Kim, S Imoto, S Miyano
    posted to bayesian expression interactions physical by noano on 2006-06-29 08:54:01 as read along with 2 people Borelli wnpx
  • Identifying regulatory networks by combinatorial analysis of promoter elements.
    Nat Genet, Vol. 29, No. 2. (October 2001), pp. 153-159.
    by Y Pilpel, P Sudarsanam, GM Church
    posted to expression motifs networks sequence by noano on 2006-06-29 08:43:13 as read along with 7 people and 1 group windman83 ihpark imouthesmp troels_marstrand xwbcn wnpx koller Bioinformatics
  • Unique and redundant roles for HOG MAPK pathway components as revealed by whole-genome expression analysis.
    Mol Biol Cell, Vol. 15, No. 2. (February 2004), pp. 532-542.
    by SM O'Rourke, I Herskowitz
    posted to expression mapk osmolarity pathway yeast by noano on 2006-06-28 17:32:50 as read
  • Validation and refinement of gene-regulatory pathways on a network of physical interactions.
    Genome Biol, Vol. 6, No. 7. (2005)
    by CH Yeang, HC Mak, S McCuine, C Workman, T Jaakkola, T Ideker
    posted to interactions pathway physical regulation by noano on 2006-06-28 17:30:55 as read along with 11 people and 1 group jago carlk AlexanderPico snuppepuppan abhik tmmurali textoris wnpx koller ccr cdppublications CDP
  • Integrative genetic analysis of transcription modules: towards filling the gap between genetic loci and inherited traits.
    Hum Mol Genet, Vol. 15, No. 3. (1 February 2006), pp. 481-492.
    by H Li, H Chen, L Bao, KF Manly, EJ Chesler, L Lu, J Wang, M Zhou, RW Williams, Y Cui
    posted to genotype modules networks by noano on 2006-06-28 17:25:04 as ***** along with 3 people balicea fisherp koller
  • Dissecting asthma using focused transgenic modeling and functional genomics
    Journal of Allergy and Clinical Immunology, Vol. 116, No. 2. (August 2005), pp. 305-311.
    by Douglas A Kuperman, Christina C Lewis, Prescott G Woodruff, Madeleine W Rodriguez, Yee H Yang, Gregory M Dolganov, John V Fahy, David J Erle
    posted to asthma expression mice by noano on 2006-06-28 17:12:00 as read
  • Gene regulation by microRNAs.
    Curr Opin Genet Dev (23 February 2006)
    by Richard W W Carthew
    posted to microrna by noano on 2006-06-28 17:08:57 as *** along with 9 people and 4 groups marcius eckart_bindewald tardigrade rodrigo dchughes mtagaya balabu cdawson heliopais microRNA BioinfoCIPF SGU-CIPF GIG
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