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neils binding [19 articles]

最近 neils さんのライブラリに追加された論文の中から タグ binding. You can also see everyone's binding.
  • Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs.
    Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3635-3641.
    by JC Obenauer, LC Cantley, MB Yaffe
    posted to transduction structure software sites signal sequence proteome proteins protein phosphorylation motifs internet databases binding article-predikin article-nar analysis amino algorithms by neils on 2008-04-24 16:16:06 as ** along with 2 people Evangelia mloewer
  • Using peptide arrays to define nuclear carrier binding sites on nucleoporins
    Methods, Vol. 39, No. 4. (August 2006), pp. 329-341.
    by Ian Cushman, Timothy Palzkill, Mary S Moore
    posted to array binding nls nuclear nucleoporin peptide by neils on 2008-04-17 04:12:26 as ** along with 1 person brianb
  • A Systematic Assessment of MHC Class II Peptide Binding Predictions and Evaluation of a Consensus Approach
    PLoS Comput Biol, Vol. 4, No. 4. (Apr 2008)
    by Peng Wang, John Sidney, Courtney Dow, Bianca Mothé, Alessandro Sette, Bjoern Peters
    posted to affinity binding bioinformatics evaluation mhc peptide prediction by neils on 2008-04-15 03:01:11 as **
  • Ligand binding affinity prediction by linear interaction energy methods
    Journal of Computer-Aided Molecular Design, Vol. 12, No. 1. (1 January 1998), pp. 27-35.
    by Tomas Hansson, John Marelius, Johan Åqvist
    posted to affinity binding bioinformatics lie ligand prediction by neils on 2008-04-15 02:18:54 as **
  • Structure-based prediction of transcription factor binding sites using a protein-DNA docking approach
    Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2008), NA.
    by Zhijie Liu, Jun-Tao Guo, Ting Li, Ying Xu
    posted to binding bioinformatics docking factor prediction structure transcription by neils on 2008-03-05 01:15:12 as ** along with 1 person aalibes
  • MODPROPEP: a program for knowledge-based modeling of protein-peptide complexes.
    Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007)
    by N Kumar, D Mohanty
    posted to binding complexes kinases mhc peptides protein-protein software webserver by neils on 2008-01-16 02:50:32 as **
  • PPSP: prediction of PK-specific phosphorylation site with Bayesian decision theory.
    BMC Bioinformatics, Vol. 7 (2006)
    by Yu Xue, Ao Li, Lirong Wang, Huanqing Feng, Xuebiao Yao
    posted to alignment amino analysis article-nar article-predikin bayes binding data kinases molecular phosphorylation protein sequence sites software theorem by neils on 2007-12-04 03:22:14 as **
  • Phosphorylation of p90 ribosomal S6 kinase (RSK) regulates extracellular signal-regulated kinase docking and RSK activity.
    Mol Cell Biol, Vol. 23, No. 14. (Jul 2003), pp. 4796-4804.
    by Philippe P Roux, Stephanie A Richards, John Blenis
    posted to 90-kda acid amino article-predikin binding cells cultured data epidermal extracellular factor growth homology humans isoenzymes kinase kinases matrix mitogen-activated mitogens molecular mutation phosphorylation protein ribosomal s6 sequence serine signal sites structure tertiary transduction by neils on 2007-12-04 03:22:14 as **
  • Docking interactions in protein kinase and phosphatase networks.
    Curr Opin Struct Biol, Vol. 16, No. 6. (Dec 2006), pp. 676-685.
    by Attila Reményi, Matthew C Good, Wendell A Lim
    posted to allosteric article-predikin binding biological complexes conformation design drug kinase kinases map models molecular multiprotein phosphatases phosphoprotein protein regulation signal signaling sites structure system tertiary transduction by neils on 2007-12-04 03:22:14 as **
  • A dimeric kinase assembly underlying autophosphorylation in the p21 activated kinases.
    J Mol Biol, Vol. 361, No. 2. (Aug 2006), pp. 312-326.
    by Michelle Pirruccello, Holger Sondermann, Jeffrey G Pelton, Patricia Pellicena, André Hoelz, Jonathan Chernoff, David E Wemmer, John Kuriyan
    posted to acid activation amino article-predikin binding catalysis catalytic conformation crystallography data dimerization domain enzyme folding homology humans kinases kinetics models molecular mutation p21-activated phosphopeptides phosphorylation protein protein-serine-threonine sequence sites structure tertiary x-ray by neils on 2007-12-04 03:22:14 as **
  • Protein kinase inhibitors: insights into drug design from structure.
    Science, Vol. 303, No. 5665. (Mar 2004), pp. 1800-1805.
    by Martin EM Noble, Jane A Endicott, Louise N Johnson
    posted to adenosine agents antineoplastic article-predikin as binding catalytic clinical conformation design domain drug enzyme humans inhibitors kinase kinases models molecular protein relationship signal sites structure structure-activity tertiary topic transduction trials triphosphate by neils on 2007-12-04 03:22:14 as **
  • Systematic discovery of in vivo phosphorylation networks.
    Cell, Vol. 129, No. 7. (Jun 2007), pp. 1415-1426.
    by Rune Linding, Lars J Jensen, Gerard J Ostheimer, Marcel ATM van Vugt, Claus Jørgensen, Ioana M Miron, Francesca Diella, Karen Colwill, Lorne Taylor, Kelly Elder, Pavel Metalnikov, Vivian Nguyen, Adrian Pasculescu, Jing Jin, Jin G Park, Leona D Samson, James R Woodgett, Robert B Russell, Peer Bork, Michael B Yaffe, Tony Pawson
    posted to article-predikin binding biology cdc2 cell computational cycle damage dna dna-binding enzymes factors glycogen humans intracellular kinase kinases peptides phosphoproteins phosphorylation protein proteins protein-serine-threonine proteomics repair repressor signal signaling sites software suppressor synthase transcription transduction tumor by neils on 2007-12-04 03:22:14 as **
  • The active conformation of the PAK1 kinase domain.
    Structure, Vol. 13, No. 5. (May 2005), pp. 769-778.
    by Ming Lei, Michael A Robinson, Stephen C Harrison
    posted to adenosine article-predikin binding data diffraction humans kinases molecular mutation protein protein-serine-threonine sequence sites structure tertiary triphosphate x-ray by neils on 2007-12-04 03:22:13 as **
  • Substrate specificity of protein kinases and computational prediction of substrates.
    Biochim Biophys Acta, Vol. 1754, No. 1-2. (Dec 2005), pp. 200-209.
    by Bostjan Kobe, Thorsten Kampmann, Jade K Forwood, Pawel Listwan, Ross I Brinkworth
    posted to article-nar article-predikin binding biology computational kinases models molecular peptides phosphatases phosphoprotein phosphorylation protein secondary sites specificity structure substrate by neils on 2007-12-04 03:22:13 as **
  • Prediction of phosphorylation sites using SVMs.
    Bioinformatics, Vol. 20, No. 17. (Nov 2004), pp. 3179-3184.
    by Jong H Kim, Juyoung Lee, Bermseok Oh, Kuchan Kimm, Insong Koh
    posted to algorithms alignment analysis article-predikin artificial binding chemical computer intelligence models molecular phosphorylation phosphotransferases protein proteins relationship sequence simulation sites structure-activity by neils on 2007-12-04 03:22:13 as **
  • Phospho.ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins.
    BMC Bioinformatics, Vol. 5 (Jun 2004)
    by Francesca Diella, Scott Cameron, Christine Gemünd, Rune Linding, Allegra Via, Bernhard Kuster, Thomas S Pontén, Nikolaj Blom, Toby J Gibson
    posted to animals article-predikin binding databases design humans mice phosphorylation post-translational processing protein proteins rats research sites software by neils on 2007-12-04 03:22:12 as **
  • Phosphorylation of the mitochondrial protein Sab by stress-activated protein kinase 3.
    Biochem Biophys Res Commun, Vol. 319, No. 1. (Jun 2004), pp. 130-137.
    by Naomi W Court, Ivana Kuo, Oonagh Quigley, Marie A Bogoyevitch
    posted to adaptor animals article-predikin binding cardiac carrier cell glutathione humans jnk kinase kinases line map mitochondria mitogen-activated mutagenesis mutation myocytes phosphorylation protein proteins rats serine signal signaling site-directed specificity structure substrate system tertiary transducing transferase by neils on 2007-12-04 03:22:12 as **
  • Sequence and structure-based prediction of eukaryotic protein phosphorylation sites.
    J Mol Biol, Vol. 294, No. 5. (Dec 1999), pp. 1351-1362.
    by N Blom, S Gammeltoft, S Brunak
    posted to acid amino animals article-nar article-predikin binding cells computer consensus eukaryotic glycosylation models molecular motifs networks neural nuclear of phosphoproteins phosphorylation phylogeny protein proteins reproducibility results sensitivity sequence serine sites specificity structure substrate tertiary threonine trans-activators tyrosine by neils on 2007-12-04 03:22:11 as **
  • Scoring of predicted GRK2 phosphorylation sites in Nedd4-2.
    Bioinformatics, Vol. 22, No. 18. (Sep 2006), pp. 2192-2195.
    by Jonathan W Arthur, Angeles S Perez, David I Cook
    posted to acid algorithms alignment amino analysis article-predikin artificial beta-adrenergic binding chemical computer data g-protein-coupled homology intelligence interaction kinase kinases ligases mapping models molecular phosphorylation protein receptor sequence simulation sites ubiquitin-protein by neils on 2007-12-04 03:22:11 as **
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