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neils analysis [25 articles]

最近 neils さんのライブラリに追加された論文の中から タグ analysis. You can also see everyone's analysis.
  • The cytochromes c-550 of Paracoccus denitrificans and Thiosphaera pantotropha: a need for re-evaluation of the history of Paracoccus cultures
    FEMS Microbiology Letters, Vol. 137, No. 1. (1996), pp. 95-101.
    by Celia F Goodhew, Graham W Pettigrew, Bart Devreese, Jozef Beeumen, Rob J Spanning, Simon C Baker, Neil Saunders, Stuart J Ferguson, Ian P Thompson
    posted to sequence paracoccus cytochrome analysis by neils on 2008-05-11 10:37:08 as **
  • Serpins in unicellular Eukarya, Archaea, and Bacteria: sequence analysis and evolution.
    Journal of molecular evolution, Vol. 59, No. 4. (October 2004), pp. 437-447.
    by TH Roberts, J Hejgaard, NF Saunders, R Cavicchioli, PM Curmi
    posted to serpin sequence evolution bioinformatics analysis by neils on 2008-05-11 10:11:58 as **
  • Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs.
    Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3635-3641.
    by JC Obenauer, LC Cantley, MB Yaffe
    posted to transduction structure software sites signal sequence proteome proteins protein phosphorylation motifs internet databases binding article-predikin article-nar analysis amino algorithms by neils on 2008-04-24 16:16:06 as ** along with 2 people Evangelia mloewer
  • Linear Discriminant Analysis-Based Estimation of the False Discovery Rate for Phosphopeptide Identifications
    J. Proteome Res. (19 April 2008)
    by Xiuxia Du, Feng Yang, Nathan P Manes, David L Stenoien, Matthew E Monroe, Joshua N Adkins, David J States, Samuel O Purvine, Ii Camp, Richard D Smith
    posted to analysis mass phosphopeptides phosphorylation proteomics spectrometry statistical by neils on 2008-04-19 07:51:23 as ** along with 2 people nedwards brianb
  • Indicators from archaeal secretomes.
    Microbiological research (11 April 2008)
    by Mazen Saleh, Catharine Song, Sabah Nasserulla, L G G Leduc
    posted to analysis archaea bioinformatics genomics prediction secretion by neils on 2008-04-18 12:25:45 as **
  • The FoldX web server: an online force field.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005)
    by J Schymkowitz, J Borg, F Stricher, R Nys, F Rousseau, L Serrano
    posted to analysis foldx force-field structure webserver by neils on 2008-04-16 02:40:51 as ** along with 2 people aalibes chad_davis
  • Simple is beautiful: a straightforward approach to improve the delineation of true and false positives in PSI-BLAST searches
    Bioinformatics (2008)
    by Marianne M Lee, Michael K Chan, Ralf Bundschuh
    posted to analysis bioinformatics psi-blast sequence statistics by neils on 2008-04-11 01:32:11 as **
  • A recipe for high impact
    Genome Biology, Vol. 8, No. 5. (2007)
    by Murat Cokol, Raul R Esteban, Andrey Rzhetsky
    posted to analysis impact-factor publications statistical by neils on 2008-04-10 08:54:59 as ** along with 2 people and 2 groups dullhunk grahamc Bioinformatics ParkinsonLab_at_MaRS
  • Advances in the Analysis of Protein Phosphorylation
    J. Proteome Res. (8 March 2008)
    by Alberto Paradela, Juan P Albar
    posted to analysis methods phosphorylation proteomics review by neils on 2008-03-10 02:28:00 as ** along with 1 person jyuh
  • Citation Advantage of Open Access Articles
    PLoS Biology, Vol. 4, No. 5. (1 May 2006)
    by Gunther Eysenbach
    posted to analysis citations openaccess publications statistics by neils on 2008-03-05 01:34:58 as ** along with 5 people jcherfas dullhunk abelmagalhaes ayoungenator amarois
  • Initial Severity and Antidepressant Benefits: A Meta-Analysis of Data Submitted to the Food and Drug Administration
    PLoS Medicine, Vol. 5, No. 2. (1 February 2008), e45.
    by Irving Kirsch, Brett J Deacon, Tania B Huedo-Medina, Alan Scoboria, Thomas J Moore, Blair T Johnson
    posted to analysis depression fda medicine prozac statistical by neils on 2008-02-26 00:29:26 as ** along with 3 people microserf almostc timsenior
  • Amino acid composition of genomes, lifestyles of organisms, and evolutionary trends: a global picture with correspondence analysis
    Gene, Vol. 297, No. 1-2. (4 September 2002), pp. 51-60.
    by Fredj Tekaia, Edouard Yeramian, Bernard Dujon
    posted to analysis composition correspondence evolution for-thuber genomics global proteins sequences thermophily by neils on 2008-01-25 06:51:06 as ** along with 1 person nagendranow
  • GPS: a comprehensive www server for phosphorylation sites prediction.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (Jul 2005), pp. W184-W187.
    by Yu Xue, Fengfeng Zhou, Minjie Zhu, Kashif Ahmed, Guoliang Chen, Xuebiao Yao
    posted to analysis article-nar article-predikin internet kinases microfilament phosphoproteins phosphorylation protein proteins sequence software specificity substrate tissue by neils on 2007-12-04 03:22:14 as **
  • PPSP: prediction of PK-specific phosphorylation site with Bayesian decision theory.
    BMC Bioinformatics, Vol. 7 (2006)
    by Yu Xue, Ao Li, Lirong Wang, Huanqing Feng, Xuebiao Yao
    posted to alignment amino analysis article-nar article-predikin bayes binding data kinases molecular phosphorylation protein sequence sites software theorem by neils on 2007-12-04 03:22:14 as **
  • SMART 5: domains in the context of genomes and networks.
    Nucleic Acids Res, Vol. 34, No. Database issue. (Jan 2006), pp. D257-D260.
    by Ivica Letunic, Richard R Copley, Birgit Pils, Stefan Pinkert, Jörg Schultz, Peer Bork
    posted to alignment analysis article-nar article-pka-pkg article-predikin biological catalysis catalytic complexes databases domain genomics interface internet models multiprotein protein sequence structure tertiary user-computer by neils on 2007-12-04 03:22:13 as **
  • Prediction of phosphorylation sites using SVMs.
    Bioinformatics, Vol. 20, No. 17. (Nov 2004), pp. 3179-3184.
    by Jong H Kim, Juyoung Lee, Bermseok Oh, Kuchan Kimm, Insong Koh
    posted to algorithms alignment analysis article-predikin artificial binding chemical computer intelligence models molecular phosphorylation phosphotransferases protein proteins relationship sequence simulation sites structure-activity by neils on 2007-12-04 03:22:13 as **
  • KinasePhos: a web tool for identifying protein kinase-specific phosphorylation sites.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (Jul 2005), pp. W226-W229.
    by Hsien Da Huang, Tzong Y Lee, Shih W Tzeng, Jorng T Horng
    posted to analysis article-nar article-predikin biology chains computational internet kinases markov phosphoproteins phosphorylation protein sequence software by neils on 2007-12-04 03:22:12 as **
  • ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (Jul 2006), pp. W362-W365.
    by Edouard de Castro, Christian JA Sigrist, Alexandre Gattiker, Virginie Bulliard, Petra, Elisabeth Gasteiger, Amos Bairoch, Nicolas Hulo
    posted to acid acids amino analysis article-predikin databases homology interface internet protein proteins sequence software structure tertiary user-computer by neils on 2007-12-04 03:22:12 as **
  • A kinase sequence database: sequence alignments and family assignment.
    Bioinformatics, Vol. 18, No. 9. (Sep 2002), pp. 1274-1275.
    by Oleksandr Buzko, Kevan M Shokat
    posted to alignment analysis article-predikin cluster database databases homology information internet kinases management protein retrieval sequence storage systems by neils on 2007-12-04 03:22:12 as **
  • Protein kinases associated with the yeast phosphoproteome.
    BMC Bioinformatics, Vol. 7 (2006)
    by Ross I Brinkworth, Alan L Munn, Bostjan Kobe
    posted to acid alignment amino analysis article-predikin cerevisiae data fungal interaction kinases mapping molecular phosphoproteins phosphorylation protein proteins proteome saccharomyces sequence specificity substrate by neils on 2007-12-04 03:22:12 as **
  • Scoring of predicted GRK2 phosphorylation sites in Nedd4-2.
    Bioinformatics, Vol. 22, No. 18. (Sep 2006), pp. 2192-2195.
    by Jonathan W Arthur, Angeles S Perez, David I Cook
    posted to acid algorithms alignment amino analysis article-predikin artificial beta-adrenergic binding chemical computer data g-protein-coupled homology intelligence interaction kinase kinases ligases mapping models molecular phosphorylation protein receptor sequence simulation sites ubiquitin-protein by neils on 2007-12-04 03:22:11 as **
  • The protein kinase complement of the human genome.
    Science, Vol. 298, No. 5600. (Dec 2002), pp. 1912-1934.
    by G Manning, DB Whyte, R Martinez, T Hunter, S Sudarsanam
    posted to analysis animals biology catalysis chromosome computational databases dna genes genetic genome human humans kinases mapping neoplasms phylogeny protein pseudogenes sequence signal structure tertiary transduction article-pka-pkg by neils on 2007-12-04 01:53:38 as **
  • The importance of intrinsic disorder for protein phosphorylation.
    Nucleic Acids Res, Vol. 32, No. 3. (2004), pp. 1037-1049.
    by Lilia M Iakoucheva, Predrag Radivojac, Celeste J Brown, Timothy R O'Connor, Jason G Sikes, Zoran Obradovic, Keith A Dunker
    posted to acids amino analysis animals databases internet of phosphorylation protein proteins proteome reproducibility results sequence article-pka-pkg by neils on 2007-12-04 01:53:37 as **
  • The Gene Ontology (GO) project in 2006.
    Nucleic Acids Res, Vol. 34, No. Database issue. (Jan 2006), pp. D322-D326.
    by gene O Consortium
    posted to analysis control controlled database databases expression gene genes genetic interface internet management quality sequence software systems user-computer vocabulary article-pka-pkg by neils on 2007-12-04 01:53:37 as **
  • Proteomic and computational analysis of secreted proteins with type I signal peptides from the Antarctic archaeon Methanococcoides burtonii.
    J Proteome Res, Vol. 5, No. 9. (Sep 2006), pp. 2457-2464.
    by Neil FW Saunders, Charmaine Ng, Mark Raftery, Michael Guilhaus, Amber Goodchild, Ricardo Cavicchioli
    posted to acid alignment amino analysis antarctic archaeal bibtex-import biology chromatography compounds computational data liquid mass methanosarcinaceae molecular organophosphorus protein proteins proteomics regions sequence signals sorting spectrometry by neils on 2007-11-23 05:17:31 as **
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