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neils amino [23 articles]

最近 neils さんのライブラリに追加された論文の中から タグ amino. You can also see everyone's amino.
  • Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs.
    Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3635-3641.
    by JC Obenauer, LC Cantley, MB Yaffe
    posted to transduction structure software sites signal sequence proteome proteins protein phosphorylation motifs internet databases binding article-predikin article-nar analysis amino algorithms by neils on 2008-04-24 16:16:06 as ** along with 2 people Evangelia mloewer
  • Analysis of the residue-residue coevolution network and the functionally important residues in proteins
    Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2008), NA.
    by Byung-Chul Lee, Keunwan Park, Dongsup Kim
    posted to acids amino bioinformatics coevolution function network residues by neils on 2008-04-10 13:28:46 as ** along with 7 people and 2 groups wilbur friendpine barry sobolevnrm mingzhi penpen926 scienbox structural_bioinformatics baker-group
  • Statistical analysis of the physical properties of the 20 naturally occurring amino acids
    Journal of Protein Chemistry, Vol. 4, No. 1. (1 February 1985), pp. 23-55.
    by Akinori Kidera, Yasuo Konishi, Masahito Oka, Tatsuo Ooi, Harold A Scheraga
    posted to acids amino proteins sequences statistics by neils on 2007-12-11 06:54:52 as **
  • Protein kinase specificity. A strategic collaboration between kinase peptide specificity and substrate recruitment.
    Cell Cycle, Vol. 4, No. 1. (Jan 2005), pp. 52-56.
    by Guozhi Zhu, Yin Liu, Stephen Shaw
    posted to acid activation amino article-predikin enzyme fragments humans interaction kinases mapping peptide peptides phosphorylation protein sequence signal specificity substrate transduction by neils on 2007-12-04 03:22:14 as **
  • PPSP: prediction of PK-specific phosphorylation site with Bayesian decision theory.
    BMC Bioinformatics, Vol. 7 (2006)
    by Yu Xue, Ao Li, Lirong Wang, Huanqing Feng, Xuebiao Yao
    posted to alignment amino analysis article-nar article-predikin bayes binding data kinases molecular phosphorylation protein sequence sites software theorem by neils on 2007-12-04 03:22:14 as **
  • Centrosomal anchoring of the protein kinase CK1delta mediated by attachment to the large, coiled-coil scaffolding protein CG-NAP/AKAP450.
    J Mol Biol, Vol. 322, No. 4. (Sep 2002), pp. 785-797.
    by James E Sillibourne, Diane M Milne, Mikiko Takahashi, Yoshitaka Ono, David W Meek
    posted to acid acids adaptor aethiops amino anchor animals article-predikin carrier casein catalysis cells centrosome cercopithecus cos cytoskeletal data fractions fragments fusion humans isoenzymes kinase kinases male molecular peptide precipitin protein proteins rats recombinant sequence signal specificity structure subcellular substrate tertiary tests transducing by neils on 2007-12-04 03:22:14 as **
  • Phosphorylation of p90 ribosomal S6 kinase (RSK) regulates extracellular signal-regulated kinase docking and RSK activity.
    Mol Cell Biol, Vol. 23, No. 14. (Jul 2003), pp. 4796-4804.
    by Philippe P Roux, Stephanie A Richards, John Blenis
    posted to 90-kda acid amino article-predikin binding cells cultured data epidermal extracellular factor growth homology humans isoenzymes kinase kinases matrix mitogen-activated mitogens molecular mutation phosphorylation protein ribosomal s6 sequence serine signal sites structure tertiary transduction by neils on 2007-12-04 03:22:14 as **
  • A dimeric kinase assembly underlying autophosphorylation in the p21 activated kinases.
    J Mol Biol, Vol. 361, No. 2. (Aug 2006), pp. 312-326.
    by Michelle Pirruccello, Holger Sondermann, Jeffrey G Pelton, Patricia Pellicena, André Hoelz, Jonathan Chernoff, David E Wemmer, John Kuriyan
    posted to acid activation amino article-predikin binding catalysis catalytic conformation crystallography data dimerization domain enzyme folding homology humans kinases kinetics models molecular mutation p21-activated phosphopeptides phosphorylation protein protein-serine-threonine sequence sites structure tertiary x-ray by neils on 2007-12-04 03:22:14 as **
  • How do protein kinases recognize their substrates?
    Biochim Biophys Acta, Vol. 1314, No. 3. (Dec 1996), pp. 191-225.
    by LA Pinna, M Ruzzene
    posted to acid amino animals article-predikin consensus data kinases library molecular peptide phosphorylation protein sequence specificity substrate by neils on 2007-12-04 03:22:14 as **
  • Identification of residues which regulate activity of the STE20-related kinase hMINK.
    Biochem Biophys Res Commun, Vol. 300, No. 3. (Jan 2003), pp. 694-698.
    by Jaeseung Lim, Andrew Lennard, Paul W Sheppard, Stuart Kellie
    posted to acid amino antibody article-predikin cell cerevisiae channels cloning data humans jnk kidney kinases line mitogen-activated molecular mutagenesis organ phosphorylation potassium protein proteins protein-serine-threonine relationship saccharomyces sequence site-directed specificity structure structure-activity tertiary voltage-gated by neils on 2007-12-04 03:22:13 as **
  • Structural modes of stabilization of permissive phosphorylation sites in protein kinases: distinct strategies in Ser/Thr and Tyr kinases.
    J Mol Biol, Vol. 339, No. 5. (Jun 2004), pp. 1025-1039.
    by A Krupa, G Preethi, N Srinivasan
    posted to acid activation adenosine alignment amino article-predikin catalytic data domain enzyme kinases models molecular phosphorylation protein protein-serine-threonine protein-tyrosine sequence signal structure tertiary transduction triphosphate by neils on 2007-12-04 03:22:13 as **
  • Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors.
    Plant J, Vol. 44, No. 6. (Dec 2005), pp. 939-949.
    by Yuhko Kobayashi, Michiharu Murata, Hideyuki Minami, Shuhei Yamamoto, Yasuaki Kagaya, Tokunori Hobo, Akiko Yamamoto, Tsukaho Hattori
    posted to abscisic acid activation amino article-predikin basic-leucine data elements enzyme expression factors gene growth kinases kinetics molecular oryza osmotic phosphorylation plant pressure proteins protein-serine-threonine recombinant regulation regulators response sativa sequence serine signal transcription transduction zipper by neils on 2007-12-04 03:22:13 as **
  • Biochemical characterization of the tobacco 42-kD protein kinase activated by osmotic stress.
    Plant Physiol, Vol. 136, No. 2. (Oct 2004), pp. 3255-3265.
    by Anna Kelner, Izabela Pekala, Szymon Kaczanowski, Grazyna Muszynska, Grahame D Hardie, Grazyna Dobrowolska
    posted to acid activation adenosine amino article-predikin calcium chlorides data enzyme evolution homology inhibitors kinase kinases magnesium manganese molecular monophosphate osmotic phylogeny pressure protein sequence specificity substrate tobacco water by neils on 2007-12-04 03:22:13 as **
  • C-terminal repeat domain kinase I phosphorylates Ser2 and Ser5 of RNA polymerase II C-terminal domain repeats.
    J Biol Chem, Vol. 279, No. 24. (Jun 2004), pp. 24957-24964.
    by Janice C Jones, Hemali P Phatnani, Timothy A Haystead, Justin A Macdonald, Munir S Alam, Arno L Greenleaf
    posted to acid amino antibodies article-predikin data kinases molecular monoclonal phosphorylation polymerase protein repetitive rna saccharomycetales sequence sequences serine specificity substrate by neils on 2007-12-04 03:22:13 as **
  • Amino acid substitution matrices from protein blocks.
    Proc Natl Acad Sci U S A, Vol. 89, No. 22. (Nov 1992), pp. 10915-10919.
    by S Henikoff, JG Henikoff
    posted to acid algorithms amino animals article-predikin caenorhabditis data drosophila elegans homology lod mathematics molecular probability proteins score sequence software by neils on 2007-12-04 03:22:12 as **
  • BRSK2 is activated by cyclic AMP-dependent protein kinase A through phosphorylation at Thr260.
    Biochem Biophys Res Commun, Vol. 347, No. 4. (Sep 2006), pp. 867-871.
    by Zekun Guo, Wenwen Tang, Jian Yuan, Xinya Chen, Bo Wan, Xiuting Gu, Kuntian Luo, Yingli Wang, Long Yu
    posted to acid activation alignment amino amp-dependent article-predikin cyclic data enzyme kinases molecular phosphorylation protein protein-serine-threonine sequence threonine by neils on 2007-12-04 03:22:12 as **
  • Characterization of cyclin L2, a novel cyclin with an arginine/serine-rich domain: phosphorylation by DYRK1A and colocalization with splicing factors.
    J Biol Chem, Vol. 279, No. 6. (Feb 2004), pp. 4612-4624.
    by Katrin de Graaf, Paul Hekerman, Oliver Spelten, Andreas Herrmann, Len C Packman, Konrad Büssow, Gerhard M Newen, Walter Becker
    posted to acid amino animals arginine article-predikin base cell cells complementary cos cyclins data dna factors fusion humans kinases male mice molecular nucleus phosphorylation protein proteins protein-serine-threonine protein-tyrosine rats recombinant rna sequence serine specificity splicing structure substrate tertiary transcription by neils on 2007-12-04 03:22:12 as **
  • ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (Jul 2006), pp. W362-W365.
    by Edouard de Castro, Christian JA Sigrist, Alexandre Gattiker, Virginie Bulliard, Petra, Elisabeth Gasteiger, Amos Bairoch, Nicolas Hulo
    posted to acid acids amino analysis article-predikin databases homology interface internet protein proteins sequence software structure tertiary user-computer by neils on 2007-12-04 03:22:12 as **
  • Protein kinases associated with the yeast phosphoproteome.
    BMC Bioinformatics, Vol. 7 (2006)
    by Ross I Brinkworth, Alan L Munn, Bostjan Kobe
    posted to acid alignment amino analysis article-predikin cerevisiae data fungal interaction kinases mapping molecular phosphoproteins phosphorylation protein proteins proteome saccharomyces sequence specificity substrate by neils on 2007-12-04 03:22:12 as **
  • Sequence and structure-based prediction of eukaryotic protein phosphorylation sites.
    J Mol Biol, Vol. 294, No. 5. (Dec 1999), pp. 1351-1362.
    by N Blom, S Gammeltoft, S Brunak
    posted to acid amino animals article-nar article-predikin binding cells computer consensus eukaryotic glycosylation models molecular motifs networks neural nuclear of phosphoproteins phosphorylation phylogeny protein proteins reproducibility results sensitivity sequence serine sites specificity structure substrate tertiary threonine trans-activators tyrosine by neils on 2007-12-04 03:22:11 as **
  • Scoring of predicted GRK2 phosphorylation sites in Nedd4-2.
    Bioinformatics, Vol. 22, No. 18. (Sep 2006), pp. 2192-2195.
    by Jonathan W Arthur, Angeles S Perez, David I Cook
    posted to acid algorithms alignment amino analysis article-predikin artificial beta-adrenergic binding chemical computer data g-protein-coupled homology intelligence interaction kinase kinases ligases mapping models molecular phosphorylation protein receptor sequence simulation sites ubiquitin-protein by neils on 2007-12-04 03:22:11 as **
  • The importance of intrinsic disorder for protein phosphorylation.
    Nucleic Acids Res, Vol. 32, No. 3. (2004), pp. 1037-1049.
    by Lilia M Iakoucheva, Predrag Radivojac, Celeste J Brown, Timothy R O'Connor, Jason G Sikes, Zoran Obradovic, Keith A Dunker
    posted to acids amino analysis animals databases internet of phosphorylation protein proteins proteome reproducibility results sequence article-pka-pkg by neils on 2007-12-04 01:53:37 as **
  • Proteomic and computational analysis of secreted proteins with type I signal peptides from the Antarctic archaeon Methanococcoides burtonii.
    J Proteome Res, Vol. 5, No. 9. (Sep 2006), pp. 2457-2464.
    by Neil FW Saunders, Charmaine Ng, Mark Raftery, Michael Guilhaus, Amber Goodchild, Ricardo Cavicchioli
    posted to acid alignment amino analysis antarctic archaeal bibtex-import biology chromatography compounds computational data liquid mass methanosarcinaceae molecular organophosphorus protein proteins proteomics regions sequence signals sorting spectrometry by neils on 2007-11-23 05:17:31 as **
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