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mhucka library [174 articles]

最近 mhucka ordered by to_read.
  • From XML to RDF: how semantic web technologies will change the design of 'omic' standards
    Nature Biotechnology, Vol. 23 (2005), pp. 1099-1103.
    by Xiaoshu Wang, Robert Gorlitsky, Jonas S Almeida
    posted to no-tag by mhucka on 2007-04-28 12:25:26 as **
  • Integrating biological databases.
    Nat Rev Genet, Vol. 4, No. 5. (May 2003), pp. 337-345.
    by LD Stein
    posted to cassman-workshop by mhucka on 2007-04-21 09:59:07 as ** along with 6 people and 1 group thomaskelder irenas dullhunk fisherp myui kynn dbk-lab
  • Agile methods in biomedical software development: a multi-site experience report
    BMC Bioinformatics, Vol. 7, No. 1. (30 May 2006)
    by David W Kane, Moses M Hohman, Ethan G Cerami, Michael W Mccormick, Karl F Kuhlmman, Jeff A Byrd
    posted to cassman-workshop by mhucka on 2007-04-21 09:57:43 as ** along with 3 people nicklynch aalibes rdiaz
  • ViSWeb---the Visual Semantic Web: unifying human and machine knowledge representations with Object-Process Methodology
    The VLDB Journal, Vol. 13, No. 2. (May 2004), pp. 120-147.
    by Dov Dori
    posted to no-tag by mhucka on 2007-04-20 06:00:38 as ** along with 1 person and 1 group RiccardoAlbertoni ImatiGESemantic
  • Building with a scaffold: emerging strategies for high- to low-level cellular modeling
    Trends in Biotechnology, Vol. 21, No. 6. (June 2003), pp. 255-262.
    by T Ideker, D Lauffenburger
    posted to cassman-workshop by mhucka on 2007-04-18 04:50:13 as ** along with 2 people and 2 groups wnpx roland_ewald dIEMoSIRIS MoSi-Rostock
  • To build a better model
    Nature Methods, Vol. 4, No. 4. (April 2007), pp. 367-374.
    by Steven D Buckingham
    posted to cassman-workshop by mhucka on 2007-04-18 04:26:56 as ** along with 1 person and 2 groups nickluscombe Bioinformatics EBI-regulation
  • Systems biology, metabolic modelling and metabolomics in drug discovery and development
    Drug Discovery Today, Vol. 11, No. 23-24. (December 2006), pp. 1085-1092.
    by Douglas B Kell
    posted to cassman-workshop by mhucka on 2007-04-03 09:11:00 as ** along with 9 people and 2 groups irenas nicklynch alexg dullhunk raiyar fishtank shikin alanrw gemmalholliday steinmetzlab GeneGo
  • Standards for systems biology
    Nature Reviews Genetics, Vol. 7, No. 8. (2006), pp. 593-605.
    by Alvis Brazma, Maria Krestyaninova, Ugis Sarkans
    posted to cassman-workshop by mhucka on 2007-04-03 08:04:52 as ** along with 10 people and 3 groups natstreet aalibes jfr rdiaz ronaldozhou dagmar peterli sgoetz giovenko fgibson dIEMoSIRIS compneur GelML
  • CEBS object model for systems biology data, SysBio-OM
    Bioinformatics, Vol. 20, No. 13. (1 September 2004), pp. 2004-2015.
    by S Xirasagar, S Gustafson, BA Merrick, KB Tomer, S Stasiewicz, DD Chan, KJ Yost, JR Yates, S Sumner, N Xiao, MD Waters
    posted to no-tag by mhucka on 2007-04-03 07:47:46 as ** along with 2 people and 1 group irenas katerinakal dbk-lab
  • Beyond standardization: dynamic software infrastructures for systems biology
    Nature Reviews Genetics, Vol. 8, No. 3. (13 February 2007), pp. 235-243.
    by Morris A Swertz, Ritsert C Jansen
    posted to cassman-workshop by mhucka on 2007-04-02 07:47:05 as ** along with 4 people and 1 group moborg dullhunk peterli jfr Bioinformatics
  • The need for standards, not guidelines, in biological data reporting and sharing
    Nature Biotechnology, Vol. 24, No. 11. (2006), pp. 1369-1373.
    by Lyle D Burgoon
    posted to cassman-workshop by mhucka on 2007-04-02 07:36:49 as ** along with 2 people and 1 group raiyar jfr steinmetzlab
  • Mathematical Markup Language (MathML) Version 2.0 (Second Edition): W3C Recommendation 21 October 2003
    (2003)
    by Ron Ausbrooks, Stephen Buswell, David Carlisle, Stéphane Dalmas, Stan Devitt, Angel Diaz, Max Froumentin, Roger Hunter, Patrick Ion, Michael Kohlhase, Robert Miner, Nico Poppelier, Bruce Smith, Neil Soiffer, Robert Sutor, Stephen Watt
    edited by David Carlisle, Patrick Ion, Robert Miner, Nico Poppelier
    posted to no-tag by mhucka on 2007-04-02 06:56:27 as **
  • Mathematical Markup Language (MathML) Version 2.0
    (2001)
    by Ron Ausbrooks, Stephen Buswell, Stéphane Dalmas, Stan Devitt, Angel Diaz, Roger Hunter, Bruce Smith, Neil Soiffer, Robert Sutor, Stephen Watt
    posted to no-tag by mhucka on 2007-04-02 06:56:27 as **
  • Numerical Python
    (2001)
    by David Ascher, Paul F Dubois, Konrad Hinsen, Jim Hugunin, Travis Oliphant
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • The Jini Specification, 2nd Edition
    (2000)
    edited by Ken Arnold
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • The Java Programming Language
    (1997)
    by K Arnold, J Gosling
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • Simulac and Deduce
    (2001)
    by AP Arkin
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • Stochastic kinetic analysis of developmental pathway bifurcation in phage $λ$-infected Escherichia coli cells
    Genetics, Vol. 149 (1998), pp. 1633-1648.
    by A Arkin, J Ross, H Mcadams
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • UniProt: the Universal Protein Knowledgebase
    Nucleic Acids Res., Vol. 32 (2004), pp. D115-D119.
    by R Apweiler, A Bairoch, CH Wu, WC Barker, B Boeckmann, S Ferro, E Gasteiger, H Huang, R Lopez, M Magrane, MJ Martin, DA Natale, C O'Donovan, N Redaschi, LS Yeh
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • UniProt: The Universal Protein Resource Home Page
    (2004)
    by Rolf Apweiler, Amos Bairoch, Cathy Wu
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • Xerces Version 1.3.1
    (2001)
    by apache S Foundation
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • Crimson Version 1.1
    (2001)
    by apache S Foundation
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • RFC 3066 - Tags for the Identification of Languages
    (2001)
    by Harald T Alvestrand
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • Modeling regulatory networks at Virginia Tech
    OMICS, Vol. 7, No. 3. (2003), pp. 285-299.
    by NA Allen, L Calzone, KC Chen, A Ciliberto, N Ramakrishnanand, CA Shaffer, JC Sible, JJ Tyson, MT Vass, LT Watson, JW Zwolak
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • The Cactus Code: A Problem Solving Environment for the Grid
    (2000)
    by Gabrielle Allen, Werner Benger, Tom Goodale, Hans C Hege, Gerd Lanfermann, André Merzky, Thomas Radke, Edward Seidel, John Shalf
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • XML, bioinformatics and data integration
    Vol. 17, No. 2. (2001), pp. 115-125.
    by Frédérik Achard, Guy Vaysseix, Emmanuel Barillot
    posted to bibtex-import by mhucka on 2007-04-02 06:56:27 as **
  • Connectivity in the Yeast Cell Cycle Transcription Network: Inferences from Neural Networks.
    PLoS Computational Biology, Vol. 2, No. 12. (22 December 2006)
    by Christopher E Hart, Eric Mjolsness, Barbara J Wold
    posted to no-tag by mhucka on 2007-01-30 06:38:43 as ** along with 1 person and 1 group dpollard EisenLab
  • An auxin-driven polarized transport model for phyllotaxis.
    Proc Natl Acad Sci U S A, Vol. 103, No. 5. (31 January 2006), pp. 1633-1638.
    by H Jönsson, MG Heisler, BE Shapiro, EM Meyerowitz, E Mjolsness
    posted to development by mhucka on 2007-01-30 00:02:34 as ** along with 6 people and 2 groups smithco krissp sstoma braingrind virtualplants_admin adepace Plant-Tissue-Simulation VirtualPlants
  • Cell population heterogeneity during growth of Bacillus subtilis.
    Genes Dev, Vol. 19, No. 24. (15 December 2005), pp. 3083-3094.
    by DB Kearns, R Losick
    posted to no-tag by mhucka on 2006-11-21 06:44:57 as ** along with 2 people madhadron margaritis
  • Derivation of RNA aptamer inhibitors of human complement C5.
    Immunopharmacology, Vol. 42, No. 1-3. (May 1999), pp. 219-230.
    by G Biesecker, L Dihel, K Enney, RA Bendele
    posted to no-tag by mhucka on 2006-11-21 02:21:57 as **
  • Oligonucleotide NX1838 inhibits VEGF165-mediated cellular responses in vitro.
    In Vitro Cell Dev Biol Anim, Vol. 35, No. 9. (October 1999), pp. 533-542.
    by C Bell, E Lynam, DJ Landfair, N Janjic, ME Wiles
    posted to no-tag by mhucka on 2006-11-21 02:21:53 as **
  • Novel approach to specific growth factor inhibition in vivo: antagonism of platelet-derived growth factor in glomerulonephritis by aptamers.
    Am J Pathol, Vol. 154, No. 1. (January 1999), pp. 169-179.
    by J Floege, T Ostendorf, U Janssen, M Burg, HH Radeke, C Vargeese, SC Gill, LS Green, N Janjić
    posted to no-tag by mhucka on 2006-11-21 02:21:49 as **
  • The foam production system of the male Japanese quail: characterization of structure and function.
    Brain Behav Evol, Vol. 52, No. 2. (1998), pp. 61-80.
    by CM Seiwert, E Adkins-Regan
    posted to no-tag by mhucka on 2006-11-21 02:18:06 as **
  • RNA aptamers as pathway-specific MAP kinase inhibitors.
    Chem Biol, Vol. 7, No. 11. (November 2000), pp. 833-843.
    by SD Seiwert, T Stines Nahreini, S Aigner, NG Ahn, OC Uhlenbeck
    posted to no-tag by mhucka on 2006-11-21 02:18:03 as **
  • The German Environmental Survey 1990/1992 (GerES II): reference concentrations of selected environmental pollutants in blood, urine, hair, house dust, drinking water and indoor air.
    J Expo Anal Environ Epidemiol, Vol. 10, No. 6 Pt 1. (c 2000), pp. 552-565.
    by B Seifert, K Becker, D Helm, C Krause, C Schulz, M Seiwert
    posted to no-tag by mhucka on 2006-11-21 02:18:00 as ** along with 2 people markup calvin
  • Spreading depression induces permanent cell swelling under penumbra conditions.
    Acta Neurochir Suppl, Vol. 76 (2000), pp. 251-255.
    by O Kempski, H Otsuka, T Seiwert, A Heimann
    posted to no-tag by mhucka on 2006-11-21 02:17:45 as **
  • AbrB, a regulator of gene expression in Bacillus, interacts with the transcription initiation regions of a sporulation gene and an antibiotic biosynthesis gene.
    Proc Natl Acad Sci U S A, Vol. 86, No. 21. (November 1989), pp. 8457-8461.
    by JB Robertson, M Gocht, MA Marahiel, P Zuber
    posted to no-tag by mhucka on 2006-11-20 12:27:54 as **
  • AbrB and Spo0E control the proper timing of sporulation in Bacillus subtilis.
    Curr Microbiol, Vol. 48, No. 4. (April 2004), pp. 262-269.
    by SH Shafikhani, T Leighton
    posted to no-tag by mhucka on 2006-11-20 12:21:26 as **
  • Microarray analysis of the Bacillus subtilis K-state: genome-wide expression changes dependent on ComK.
    Mol Microbiol, Vol. 43, No. 5. (March 2002), pp. 1331-1345.
    by RM Berka, J Hahn, M Albano, I Draskovic, M Persuh, X Cui, A Sloma, W Widner, D Dubnau
    posted to no-tag by mhucka on 2006-11-20 12:21:18 as ** along with 1 person treangen
  • Characterization of the global transcriptional responses to different types of DNA damage and disruption of replication in Bacillus subtilis.
    J Bacteriol, Vol. 188, No. 15. (August 2006), pp. 5595-5605.
    by AI Goranov, E Kuester-Schoeck, JD Wang, AD Grossman
    posted to no-tag by mhucka on 2006-11-20 12:21:13 as **
  • Catabolite repression and activation in Bacillus subtilis: dependency on CcpA, HPr, and HprK.
    J Bacteriol, Vol. 187, No. 22. (November 2005), pp. 7826-7839.
    by GL Lorca, YJ Chung, RD Barabote, W Weyler, CH Schilling, MH Saier
    posted to no-tag by mhucka on 2006-11-20 12:21:08 as **
  • Expression of a new operon from Bacillus subtilis, ykzB-ykoL, under the control of the TnrA and PhoP-phoR global regulators.
    J Bacteriol, Vol. 182, No. 5. (March 2000), pp. 1226-1231.
    by D Robichon, M Arnaud, R Gardan, Z Pragai, M O'Reilly, G Rapoport, M Débarbouillé
    posted to no-tag by mhucka on 2006-11-20 12:21:03 as **
  • Role of AbrB in Spo0A- and Spo0B-dependent utilization of a sporulation promoter in Bacillus subtilis.
    J Bacteriol, Vol. 169, No. 5. (May 1987), pp. 2223-2230.
    by P Zuber, R Losick
    posted to no-tag by mhucka on 2006-11-20 12:20:56 as **
  • Regulation of a new cell wall hydrolase gene, cwlF, which affects cell separation in Bacillus subtilis.
    J Bacteriol, Vol. 180, No. 9. (May 1998), pp. 2549-2555.
    by S Ishikawa, Y Hara, R Ohnishi, J Sekiguchi
    posted to no-tag by mhucka on 2006-11-20 12:20:48 as **
  • TnrA, a transcription factor required for global nitrogen regulation in Bacillus subtilis.
    Proc Natl Acad Sci U S A, Vol. 93, No. 17. (20 August 1996), pp. 8841-8845.
    by LV Wray, AE Ferson, K Rohrer, SH Fisher
    posted to n by mhucka on 2006-11-20 11:02:23 as **
  • Regulation of the Bacillus subtilis acetate kinase gene by CcpA.
    J Bacteriol, Vol. 175, No. 22. (November 1993), pp. 7348-7355.
    by FJ Grundy, DA Waters, SH Allen, TM Henkin
    posted to n by mhucka on 2006-11-20 11:02:17 as **
  • Structure and mechanism of action of Sda, an inhibitor of the histidine kinases that regulate initiation of sporulation in Bacillus subtilis.
    Mol Cell, Vol. 13, No. 5. (12 March 2004), pp. 689-701.
    by SL Rowland, WF Burkholder, KA Cunningham, MW Maciejewski, AD Grossman, GF King
    posted to n by mhucka on 2006-11-20 11:01:55 as **
  • The SpoOA protein of Bacillus subtilis is a repressor of the abrB gene.
    Proc Natl Acad Sci U S A, Vol. 87, No. 5. (March 1990), pp. 1801-1805.
    by M Strauch, V Webb, G Spiegelman, JA Hoch
    posted to n by mhucka on 2006-11-20 11:01:47 as **
  • The Spo0A regulon of Bacillus subtilis.
    Mol Microbiol, Vol. 50, No. 5. (December 2003), pp. 1683-1701.
    by V Molle, M Fujita, ST Jensen, P Eichenberger, JE González-Pastor, JS Liu, R Losick
    posted to n by mhucka on 2006-11-20 11:01:41 as **
  • Bacillus subtilis early sporulation genes kinA, spo0F, and spo0A are transcribed by the RNA polymerase containing sigma H.
    J Bacteriol, Vol. 174, No. 9. (May 1992), pp. 2771-2778.
    by M Predich, G Nair, I Smith
    posted to n by mhucka on 2006-11-20 11:01:32 as **
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