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mcox library [189 articles]

最近 mcox ordered by to_read.
  • Pan-viral screening of respiratory tract infections in adults with and without asthma reveals unexpected human coronavirus and human rhinovirus diversity.
    The Journal of infectious diseases, Vol. 196, No. 6. (15 September 2007), pp. 817-825.
    by A Kistler, PC Avila, S Rouskin, D Wang, T Ward, S Yagi, D Schnurr, D Ganem, JL DeRisi, HA Boushey
  • From the Cover: Microbial community gene expression in ocean surface waters
    Proceedings of the National Academy of Sciences, Vol. 105, No. 10. (11 March 2008), pp. 3805-3810.
    by Jorge Frias-Lopez, Yanmei Shi, Gene W Tyson, Maureen L Coleman, Stephan C Schuster, Sallie W Chisholm, Edward F Delong
  • A comparison of DNA- and RNA-based clone libraries from the same marine bacterioplankton community.
    FEMS microbiology ecology, Vol. 51, No. 3. (1 February 2005), pp. 341-352.
    by MM Moeseneder, JM Arrieta, GJ Herndl
    posted to bacterioplankton clone dna library rna by mcox on 2008-05-19 22:38:31 as **
  • Comparison of cellular and biomass specific activities of dominant bacterioplankton groups in stratified waters of the Celtic Sea.
    Applied and environmental microbiology, Vol. 67, No. 11. (November 2001), pp. 5210-5218.
    by MV Zubkov, BM Fuchs, PH Burkill, R Amann
    posted to activity bacterioplankton biogeochemistry biomass by mcox on 2008-05-19 22:36:36 as **
  • Navigating gene expression using microarrays--a technology review.
    Nat Cell Biol, Vol. 3, No. 8. (August 2001)
  • Simultaneous recovery of extracellular and intracellular DNA suitable for molecular studies from marine sediments.
    Applied and environmental microbiology, Vol. 71, No. 1. (January 2005), pp. 46-50.
    posted to dna extraction methods sediments by mcox on 2008-05-19 22:33:17 as **
  • Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays.
    Appl Environ Microbiol, Vol. 70, No. 7. (July 2004), pp. 4303-4317.
    by SK Rhee, X Liu, L Wu, SC Chong, X Wan, J Zhou
    posted to functional microarray by mcox on 2008-05-19 22:30:47 as ** along with 1 person icases
  • GenomicsMassively parallel sequencing
    Nature, Vol. 437, No. 7057. (14 September 2005), pp. 326-327.
    by Yu-Hui Rogers, Craig J Venter
  • Metagenomics: genomic analysis of microbial communities.
    Annu Rev Genet, Vol. 38 (2004), pp. 525-552.
  • Suppressive subtractive hybridization as a tool for identifying genetic diversity in an environmental metagenome: the rumen as a model.
    Environ Microbiol, Vol. 6, No. 9. (September 2004), pp. 928-937.
  • Phylogeny-function analysis of (meta)genomic libraries: screening for expression of ribosomal RNA genes by large-insert library fluorescent in situ hybridization (LIL-FISH).
    Environmental microbiology, Vol. 6, No. 9. (September 2004), pp. 990-998.
    by JH Leveau, S Gerards, W de Boer, JA van Veen
    posted to fish lilfish metagenomics rna screening by mcox on 2008-05-19 22:23:51 as **
  • Conditionally amplifiable BACs: switching from single-copy to high-copy vectors and genomic clones.
    Genome research, Vol. 12, No. 9. (September 2002), pp. 1434-1444.
    posted to bac fosmid library methods by mcox on 2008-05-19 22:19:26 as **
  • Community genomics in microbial ecology and evolution
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 489-498.
    by Eric E Allen, Jillian F Banfield
  • The metagenomics of soil
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 470-478.
    by Rolf Daniel
    posted to metagenomics review soil by mcox on 2008-05-19 22:16:45 as ** along with 3 people johanviklund calamar vrich
  • Opinion: Viral metagenomics
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 504-510.
    by Robert A Edwards, Forest Rohwer
  • Application of tetranucleotide frequencies for the assignment of genomic fragments.
    Environ Microbiol, Vol. 6, No. 9. (September 2004), pp. 938-947.
  • Novel division level bacterial diversity in a Yellowstone hot spring.
    Journal of bacteriology, Vol. 180, No. 2. (January 1998), pp. 366-376.
    posted to 16s clone diversity library pcr by mcox on 2008-05-19 22:13:25 as **
  • Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee
    Nature, Vol. 437, No. 7055., pp. 100-103.
    by Jennifer F Hughes, Helen Skaletsky, Tatyana Pyntikova, Patrick J Minx, Tina Graves, Steve Rozen, Richard K Wilson, David C Page
  • A genome-wide comparison of recent chimpanzee and human segmental duplications
    Nature, Vol. 437, No. 7055., pp. 88-93.
    by Ze Cheng, Mario Ventura, Xinwei She, Philipp Khaitovich, Tina Graves, Kazutoyo Osoegawa, Deanna Church, Pieter Dejong, Richard K Wilson, Svante Pääbo, Mariano Rocchi, Evan E Eichler
  • Historical review: Peptidyl transfer, the Monro era.
    Trends in biochemical sciences, Vol. 28, No. 11. (November 2003), pp. 619-624.
    by BE Maden
    posted to peptidyl review ribosome transfer by mcox on 2008-05-19 22:09:27 as **
  • Clones of human ribosomal DNA containing the complete 18 S-rRNA and 28 S-rRNA genes. Characterization, a detailed map of the human ribosomal transcription unit and diversity among clones.
    Biochem J, Vol. 246, No. 2. (1 September 1987), pp. 519-527.
    by BE Maden, CL Dent, TE Farrell, J Garde, FS McCallum, JA Wakeman
    posted to 18s human sequence by mcox on 2008-05-19 22:04:26 as ** along with 1 person and 1 group macowell BUiGEM
  • The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes.
    Nature, Vol. 423, No. 6942. (19 June 2003), pp. 825-837.
  • Eukaryotic ribosomal RNA: the recent excitement in the nucleotide modification problem.
    Chromosoma, Vol. 105, No. 7-8. (June 1997), pp. 391-400.
    by BE Maden, JM Hughes
    posted to 18s human ribosome sequence by mcox on 2008-05-19 21:59:59 as **
  • Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples.
    Applied and environmental microbiology, Vol. 67, No. 9. (September 2001), pp. 4374-4376.
    by DR Singleton, MA Furlong, SL Rathbun, WB Whitman
  • Integration of Microbial Ecology and Statistics: a Test To Compare Gene Libraries
    Appl. Environ. Microbiol., Vol. 70, No. 9. (1 September 2004), pp. 5485-5492.
    by Patrick D Schloss, Bret R Larget, Jo Handelsman
  • Pandit: a database of protein and associated nucleotide domains with inferred trees.
    Bioinformatics (Oxford, England), Vol. 19, No. 12. (12 August 2003), pp. 1556-1563.
    posted to bioinformatics database functional pandit phylogeny by mcox on 2008-05-19 21:49:21 as **
  • Analysis of bacterial community composition by oligonucleotide fingerprinting of rRNA genes.
    Applied and environmental microbiology, Vol. 68, No. 7. (July 2002), pp. 3243-3250.
    posted to 16s fingerprinting methods rna by mcox on 2008-05-19 21:46:06 as **
  • Improved method for polynucleotide probe-based cell sorting, using DNA-coated microplates.
    Applied and environmental microbiology, Vol. 70, No. 1. (January 2004), pp. 494-497.
    posted to cell-sorting functional probing by mcox on 2008-05-19 21:43:57 as **
  • Analysis of microbial gene transcripts in environmental samples.
    Applied and environmental microbiology, Vol. 71, No. 7. (July 2005), pp. 4121-4126.
  • Unexpectedly High Bacterial Diversity in Arctic Tundra Relative to Boreal Forest Soils, Revealed by Serial Analysis of Ribosomal Sequence Tags
    Appl. Environ. Microbiol., Vol. 71, No. 10. (1 October 2005), pp. 5710-5718.
    by Josh D Neufeld, William W Mohn
    posted to 16s dgge diversity sarst soil by mcox on 2008-05-19 21:31:04 as ** along with 1 person Olaf_Ilzins
  • Levels of Bacterial Community Diversity in Four Arid Soils Compared by Cultivation and 16S rRNA Gene Cloning
    Appl. Environ. Microbiol., Vol. 65, No. 4. (1 April 1999), pp. 1662-1669.
    by John Dunbar, Shannon Takala, Susan M Barns, Jody A Davis, Cheryl R Kuske
  • Use of microautoradiography combined with fluorescence in situ hybridization to determine dimethylsulfoniopropionate incorporation by marine bacterioplankton taxa.
    Applied and environmental microbiology, Vol. 70, No. 8. (August 2004), pp. 4648-4657.
    posted to bacterioplankton diversity dmsp fish marfish marine by mcox on 2008-05-19 21:28:31 as **
  • Stable-isotope probing implicates Methylophaga spp and novel Gammaproteobacteria in marine methanol and methylamine metabolism.
    ISME J, Vol. 1, No. 6. (October 2007), pp. 480-491.
    by JD Neufeld, H Schäfer, MJ Cox, R Boden, IR McDonald, JC Murrell
  • Innovation: Stable isotope probing [mdash] linking microbial identity to function
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 499-504.
    by Marc G Dumont, Colin C Murrell
    posted to isotope probing review stabel by mcox on 2008-05-19 21:24:29 as **
  • Design of long oligonucleotide probes for functional gene detection in a microbial community
    Bioinformatics, Vol. 21, No. 22. (15 November 2005), pp. 4092-4100.
    by Won-Hyong Chung, Sung-Keun Rhee, Jin-Woo Bae, Zhe-Xue Quan, Yong-Ha Park
  • Combination of Fluorescent In Situ Hybridization and Microautoradiography---a New Tool for Structure-Function Analyses in Microbial Ecology
    Appl. Environ. Microbiol., Vol. 65, No. 3. (1 March 1999), pp. 1289-1297.
    by Natuscka Lee, Per H Nielsen, Kjar H Andreasen, Stefan Juretschko, Jeppe L Nielsen, Karl-Heinz Schleifer, Michael Wagner
    posted to 16s diversity fish in marfish situ by mcox on 2008-05-19 21:21:29 as ** along with 1 person vrich
  • In situ methods for assessment of microorganisms and their activities.
    Current opinion in microbiology, Vol. 1, No. 3. (June 1998), pp. 352-358.
    by R Amann, M Kühl
    posted to 16s diversity fish rna by mcox on 2008-05-19 21:20:24 as ** along with 1 person MeganBarnett
  • Linking genetic identity and function in communities of uncultured bacteria.
    Environmental microbiology, Vol. 3, No. 8. (August 2001), pp. 481-492.
    by ND Gray, IM Head
    posted to community diversity review uncultured by mcox on 2008-05-19 21:19:14 as **
  • Fidelity of select restriction endonucleases in determining microbial diversity by terminal-restriction fragment length polymorphism.
    Applied and environmental microbiology, Vol. 69, No. 8. (August 2003), pp. 4823-4829.
    by JJ Engebretson, CL Moyer
    posted to diversity methods trflp by mcox on 2008-05-19 18:43:13 as **
  • Stable-isotope probing as a tool in microbial ecology.
    Nature, Vol. 403, No. 6770. (10 February 2000), pp. 646-649.
    posted to diversity dna isotope methods phylogeny probing stable by mcox on 2008-05-19 18:42:14 as **
  • Rapid quantification and taxonomic classification of environmental DNA from both prokaryotic and eukaryotic origins using a microarray.
    FEMS microbiology letters, Vol. 245, No. 2. (15 April 2005), pp. 271-278.
    by TZ Desantis, CE Stone, SR Murray, JP Moberg, GL Andersen
    posted to microarray phylochip phylogeny by mcox on 2008-05-19 18:41:17 as ** along with 1 person olympos
  • Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems
    J Mol Endocrinol, Vol. 29, No. 1. (1 August 2002), pp. 23-39.
    by Sa Bustin
  • Stable isotope probing of rRNA and DNA reveals a dynamic methylotroph community and trophic interactions with fungi and protozoa in oxic rice field soil.
    Environmental microbiology, Vol. 6, No. 1. (January 2004), pp. 60-72.
    by T Lueders, B Wagner, P Claus, MW Friedrich
    posted to diversity dna isotope methylotrophs probing rna soil stable by mcox on 2008-05-19 18:37:48 as **
  • RNA stable isotope probing, a novel means of linking microbial community function to phylogeny.
    Appl Environ Microbiol, Vol. 68, No. 11. (November 2002), pp. 5367-5373.
    posted to diversity functional isotope phylogeny probing rna stable by mcox on 2008-05-19 18:36:26 as **
  • rRNA sequence-based scanning electron microscopic detection of bacteria.
    Applied and environmental microbiology, Vol. 71, No. 9. (September 2005), pp. 5523-5531.
    posted to 16s diversity fish semish by mcox on 2008-05-19 18:33:35 as **
  • Extensive profiling of a complex microbial community by high-throughput sequencing.
    Applied and environmental microbiology, Vol. 68, No. 6. (June 2002), pp. 3055-3066.
    by JE Hill, RP Seipp, M Betts, L Hawkins, AG Van Kessel, WL Crosby, SM Hemmingsen
    posted to functional metagenomics methods sequencing by mcox on 2008-05-19 18:27:42 as **
  • Aminobacter ciceronei sp. nov. and Aminobacter lissarensis sp. nov., isolated from various terrestrial environments.
    International journal of systematic and evolutionary microbiology, Vol. 55, No. Pt 5. (September 2005), pp. 1827-1832.
    by IR McDonald, P Kämpfer, E Topp, KL Warner, MJ Cox, TL Hancock, LG Miller, MJ Larkin, V Ducrocq, C Coulter, DB Harper, JC Murrell, RS Oremland
    posted to aminobacter bromide halide methyl mine soil by mcox on 2008-05-19 18:17:26 as **
  • Detection and quantification of gene expression in environmental bacteriology.
    Applied and environmental microbiology, Vol. 70, No. 7. (July 2004), pp. 3795-3806.
    by FH Sharkey, IM Banat, R Marchant
    posted to methods qpcr by mcox on 2008-05-19 18:16:24 as **
  • Technical considerations for RNA-based stable isotope probing: an approach to associating microbial diversity with microbial community function.
    Rapid Commun Mass Spectrom, Vol. 16, No. 23. (2002), pp. 2179-2183.
    by M Manefield, AS Whiteley, N Ostle, P Ineson, MJ Bailey
    posted to isotope methods probing rna stable by mcox on 2008-05-19 18:14:02 as **
  • Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities.
    Environmental microbiology, Vol. 5, No. 10. (October 2003), pp. 933-943.
    by VJ Denef, J Park, JL Rodrigues, TV Tsoi, SA Hashsham, JM Tiedje
    posted to functional genomics methods microarray by mcox on 2008-05-19 18:12:51 as **
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