新規登録 | ログイン | FAQ      [?] 
Recent | Unread | Search | Authors | Tags | Export

marcius library [621 articles]

最近 marcius さんのライブラリ (優先度順).
  • Synthetic biologyEngineering Escherichia coli to see light
    Nature, Vol. 438, No. 7067. (23 November 2005), pp. 441-442.
    by Anselm Levskaya, Aaron A Chevalier, Jeffrey J Tabor, Zachary B Simpson, Laura A Lavery, Matthew Levy, Eric A Davidson, Alexander Scouras, Andrew D Ellington, Edward M Marcotte, Christopher A Voigt
    posted to bioengineering by marcius on 2006-03-01 20:59:33 as ***** along with 1 person and 2 groups dansullivanblk BioinfoCIPF SGU-CIPF
  • Derivation of protein-specific pair potentials based on weak sequence fragment similarity.
    Proteins, Vol. 38, No. 1. (1 January 2000), pp. 3-16.
    by J Skolnick, A Kolinski, A Ortiz
    posted to biophysics model_assessment statistical_potentials by marcius on 2005-10-21 20:27:37 as ***** along with 2 people and 2 groups dgront mcbla BioinfoCIPF SGU-CIPF
  • Linear motifs: evolutionary interaction switches.
    FEBS Lett, Vol. 579, No. 15. (13 June 2005), pp. 3342-3345.
    by V Neduva, RB Russell
    posted to bioinformatics protein_fragments review by marcius on 2005-10-28 19:09:47 as **** along with 3 people and 2 groups chad_davis niallhaslam Evangelia BioinfoCIPF SGU-CIPF
  • Basis for structural diversity in homologous RNAs.
    Science, Vol. 306, No. 5693. (1 October 2004), pp. 104-107.
    by AS Krasilnikov, Y Xiao, T Pan, A Mondragón
    posted to evolution rna by marcius on 2005-10-23 03:14:38 as **** along with 2 groups BioinfoCIPF SGU-CIPF
  • ARTS: alignment of RNA tertiary structures.
    Bioinformatics, Vol. 21 Suppl 2 (1 September 2005)
    by O Dror, R Nussinov, H Wolfson
    posted to algorithms rna structure_alignment by marcius on 2005-10-23 03:11:36 as **** along with 2 groups BioinfoCIPF SGU-CIPF
  • MARNA: multiple alignment and consensus structure prediction of RNAs based on sequence structure comparisons.
    Bioinformatics, Vol. 21, No. 16. (15 August 2005), pp. 3352-3359.
    by S Siebert, R Backofen
    posted to algorithms bioinformatics rna sequence_alignment by marcius on 2005-10-23 03:10:32 as **** along with 2 people and 2 groups arcticrasta ilh BioinfoCIPF SGU-CIPF
  • Comparative molecular dynamics-Similar folds and similar motions?
    Proteins (17 October 2005)
    by Andrew Pang, Yalini Arinaminpathy, Mark S P S Sansom, Philip C C Biggin
    posted to biophysics computational_biology molecular_dynamics protein_structure by marcius on 2005-10-22 16:56:55 as **** along with 2 groups BioinfoCIPF SGU-CIPF
  • Evaluation of domain prediction in CASP6.
    Proteins (26 September 2005)
    by Chin-Hsien H Tai, Woei-Jyh J Lee, James J J Vincent, Byungkook Lee
    posted to cafasp casp model_evaluation protein_domains by marcius on 2005-10-22 09:08:12 as **** along with 1 person and 2 groups nigham BioinfoCIPF SGU-CIPF
  • Assessment of predictions submitted for the CASP6 comparative modelling category.
    Proteins (26 September 2005)
    by Michael Tress, Iakes Ezkurdia, Osvaldo Graña, Gonzalo López, Alfonso Valencia
    posted to cafasp casp comparative_modeling protein_structure structure_prediction by marcius on 2005-10-22 08:59:31 as **** along with 3 people and 2 groups nigham ffranca magia215 BioinfoCIPF SGU-CIPF
  • Prediction of novel and analogous folds using fragment assembly and fold recognition.
    Proteins (26 September 2005)
    by D T T Jones, K Bryson, A Coleman, L J J McGuffin, M I I Sadowski, J S S Sodhi, J J J Ward
    posted to cafasp casp comparative_modeling model_assessment protein_fragments protein_structure structure_prediction by marcius on 2005-10-22 08:57:29 as **** along with 2 groups BioinfoCIPF SGU-CIPF
  • Improvement of comparative model accuracy by free-energy optimization along principal components of natural structural variation.
    Proc Natl Acad Sci U S A, Vol. 101, No. 43. (26 October 2004), pp. 15346-15351.
    by B Qian, AR Ortiz, D Baker
    posted to biophysics clustering comparative_modeling protein_structure structure_prediction by marcius on 2005-10-22 05:00:32 as **** along with 4 people and 4 groups ana barry lna dgront structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
  • Systemic determinants of gene evolution and function
    Molecular Systems Biology, Vol. 1, No. 1. (13 September 2005), pp. msb4100029-E1-msb4100029-E2.
    by Eugene V Koonin
    posted to evolution protein_function systems_biology by marcius on 2005-10-22 04:22:41 as **** along with 4 people and 3 groups ataheri Schmidtc bluto niallhaslam plant-development BioinfoCIPF SGU-CIPF
  • Intracellular RNA sorting, transport and localization
    Nature Structural & Molecular Biology, Vol. 12, No. 10., pp. 826-829.
    by Ralf-Peter Jansen, Michael Kiebler
    posted to meeting rna systems_biology by marcius on 2005-10-22 00:44:12 as **** along with 1 person and 2 groups imouthesmp BioinfoCIPF SGU-CIPF
  • ROCR: visualizing classifier performance in R.
    Bioinformatics (11 August 2005)
    by Tobias Sing, Oliver Sander, Niko Beerenwinkel, Thomas Lengauer
    posted to classification servers software by marcius on 2005-10-21 08:28:13 as **** along with 9 people and 4 groups bertelsen BragilMassoud ana barry Ayest lyongu schlauchi gokhan za structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
  • Why highly expressed proteins evolve slowly.
    Proc Natl Acad Sci U S A (21 September 2005)
    by D Allan A Drummond, Jesse D D Bloom, Christoph Adami, Claus O O Wilke, Frances H H Arnold
    posted to evolution pleiotropy protein_function by marcius on 2005-10-21 02:44:11 as **** along with 14 people and 5 groups wilbur balicea RamuAnandakrishnan rklancer stevanspringer bjorns imouthesmp aprasad dayjm Einat xwbcn penka balabu malcook structural_bioinformatics Nie FAB-lab BioinfoCIPF SGU-CIPF
  • Structural similarity to bridge sequence space: finding new families on the bridges.
    Protein Sci, Vol. 14, No. 5. (May 2005), pp. 1305-1314.
    by PK Shah, P Aloy, P Bork, RB Russell
    posted to bioinformatics classification clustering protein_structure structural_genomics by marcius on 2005-10-28 19:11:21 as *** along with 2 people and 2 groups eweaver drastic BioinfoCIPF SGU-CIPF
  • MicroRNA identification based on sequence and structure alignment.
    Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3610-3614.
    by X Wang, J Zhang, F Li, J Gu, T He, X Zhang, Y Li
    posted to algorithms bioinformatics rna sequence_alignment structure_alignment by marcius on 2005-10-23 03:17:36 as *** along with 2 people and 2 groups eckart_bindewald bioinfo BioinfoCIPF SGU-CIPF
  • Noncoding RNA gene detection using comparative sequence analysis.
    BMC Bioinformatics, Vol. 2, No. 1. (2001)
    by E Rivas, SR Eddy
    posted to algorithms bioinformatics rna by marcius on 2005-10-23 03:10:54 as *** along with 4 people and 2 groups evaf eckart_bindewald arcticrasta jarasch BioinfoCIPF SGU-CIPF
  • A benchmark of multiple sequence alignment programs upon structural RNAs.
    Nucleic Acids Res, Vol. 33, No. 8. (2005), pp. 2433-2439.
    by PP Gardner, A Wilm, S Washietl
    posted to bioinformatics rna sequence_alignment by marcius on 2005-10-23 03:09:57 as *** along with 2 groups BioinfoCIPF SGU-CIPF
  • Fast and reliable prediction of noncoding RNAs.
    Proc Natl Acad Sci U S A, Vol. 102, No. 7. (15 February 2005), pp. 2454-2459.
    by S Washietl, IL Hofacker, PF Stadler
    posted to algorithms bioinformatics rna by marcius on 2005-10-23 03:09:28 as *** along with 9 people and 3 groups gangli evaf dayjm eckart_bindewald tardigrade dquest Eonwe ilh raylim tulip BioinfoCIPF SGU-CIPF
  • Generalized protein structure prediction based on combination of fold-recognition with de novo folding and evaluation of models.
    Proteins (26 September 2005)
    by Andrzej Koliński, Janusz M M Bujnicki
    posted to ab-initio bioinformatics comparative_modeling model_assessment structure_prediction by marcius on 2005-10-22 09:12:12 as *** along with 2 people and 2 groups nigham dgront BioinfoCIPF SGU-CIPF
  • Automated prediction of domain boundaries in CASP6 targets using Ginzu and RosettaDOM.
    Proteins (26 September 2005)
    by David E E Kim, Dylan Chivian, Lars Malmström, David Baker
    posted to cafasp casp protein_domains ab-initio by marcius on 2005-10-22 09:07:40 as *** along with 1 person and 2 groups jwm BioinfoCIPF SGU-CIPF
  • Automatic annotation of protein function
    Current Opinion in Structural Biology, Vol. 15, No. 3. (June 2005), pp. 267-274.
    by Alfonso Valencia
    posted to bioinformatics protein_function review by marcius on 2005-10-22 09:02:45 as *** along with 5 people and 2 groups tjimenez dimka kuhn eweaver bootsy BioinfoCIPF SGU-CIPF
  • Domain definition and target classification for CASP6.
    Proteins (26 September 2005)
    by Michael Tress, Chin-Hsien H Tai, Guoli Wang, Iakes Ezkurdia, Gonzalo López, Alfonso Valencia, Byungkook Lee, Roland L L Dunbrack
    posted to cafasp casp protein_domains by marcius on 2005-10-22 09:01:23 as *** along with 2 groups BioinfoCIPF SGU-CIPF
  • Free modeling with Rosetta in CASP6.
    Proteins (26 September 2005)
    by Philip Bradley, Lars Malmström, Bin Qian, Jack Schonbrun, Dylan Chivian, David E E Kim, Jens Meiler, Kira M S M Misura, David Baker
    posted to ab-initio cafasp casp structure_prediction by marcius on 2005-10-22 08:58:20 as *** along with 4 people and 2 groups jwm dgront schuylrp mirzazadeh BioinfoCIPF SGU-CIPF
  • SPARKS 2 and SP(3) servers in CASP 6.
    Proteins (26 September 2005)
    by Hongyi Zhou, Yaoqi Zhou
    posted to cafasp casp comparative_modeling model_assessment protein_structure structure_prediction by marcius on 2005-10-22 08:56:27 as *** along with 1 person and 2 groups j3xucite BioinfoCIPF SGU-CIPF
  • Effective energy function for proteins in solution.
    Proteins, Vol. 35, No. 2. (1 May 1999), pp. 133-152.
    by T Lazaridis, M Karplus
    posted to computational_biology model_assessment protein_folding software by marcius on 2005-10-21 21:08:08 as *** along with 4 people and 2 groups kgutwin bluvsh1 choonpeng hmk BioinfoCIPF SGU-CIPF
  • MULTIPROSPECTOR: an algorithm for the prediction of protein-protein interactions by multimeric threading.
    Proteins, Vol. 49, No. 3. (15 November 2002), pp. 350-364.
    by L Lu, H Lu, J Skolnick
    posted to computational_biology protein_interactions protein_structure by marcius on 2005-10-21 19:36:56 as *** along with 5 people and 5 groups ana bicko chad_davis sangeetha ruvido structural_bioinformatics Bioinformatics insilicodrug BioinfoCIPF SGU-CIPF
  • Moonlighting proteins
    Trends in Biochemical Sciences, Vol. 24, No. 1. (1 January 1999), pp. 8-11.
    by Constance J Jeffery
    posted to pleiotropy protein_function by marcius on 2005-10-21 02:42:03 as *** along with 3 people and 3 groups stevanspringer tny benlin FAB-lab BioinfoCIPF SGU-CIPF
  • Automated de novo prediction of native-like RNA tertiary structures
    PNAS (28 August 2007), 0703836104.
    by Rhiju Das, David Baker
    posted to ab-initio rna structure_prediction by marcius on 2007-09-01 10:46:02 as ** along with 6 people and 2 groups reyez jwm eckart_bindewald zwang physics Ema BioinfoCIPF SGU-CIPF
  • RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription
    Science (17 May 2007), 1138341.
    by Philipp Kapranov, Jill Cheng, Sujit Dike, David A Nix, Radharani Duttagupta, Aarron T Willingham, Peter F Stadler, Jana Hertel, Joerg Hackermueller, Ivo L Hofacker, Ian Bell, Evelyn Cheung, Jorg Drenkow, Erica Dumais, Sandeep Patel, Gregg Helt, Madhavan Ganesh, Srinka Ghosh, Antonio Piccolboni, Victor Sementchenko, Hari Tammana, Thomas R Gingeras
    posted to classification genome ncrna by marcius on 2007-06-15 11:16:53 as ** along with 11 people and 4 groups xingxu alexg dpollard xico mtagaya rdiaz djkt stajich mathijsv asddd elfar EisenLab WetBiology BioinfoCIPF SGU-CIPF
  • RNA structure: experimental analysis.
    Curr Opin Microbiol (24 May 2007)
    by Brice Felden
    posted to experimental review rna structure by marcius on 2007-06-12 12:56:46 as ** along with 3 people and 2 groups penka emidio_capriotti debatebob BioinfoCIPF SGU-CIPF
  • RNA conformational classes.
    Nucleic Acids Res, Vol. 32, No. 5. (2004), pp. 1666-1677.
    by B Schneider, Z Morávek, HM Berman
    posted to biophysics classification rna rotamers by marcius on 2007-06-12 12:55:21 as ** along with 1 person and 2 groups emidio_capriotti BioinfoCIPF SGU-CIPF
  • Evolutionary rates vary among rRNA structural elements
    Nucl. Acids Res., Vol. 35, No. 10. (11 May 2007), pp. 3339-3354.
    by S Smit, J Widmann, R Knight
    posted to evolution rna by marcius on 2007-06-12 12:54:21 as ** along with 5 people and 3 groups eckart_bindewald balicea penka i000 cjeans BioinfoCIPF SGU-CIPF YY1
  • RNAbor: a web server for RNA structural neighbors.
    Nucleic Acids Res (25 May 2007)
    by Eva Freyhult, Vincent Moulton, Peter Clote
    posted to rna secondary_structure sequence-structure server by marcius on 2007-06-04 10:14:23 as ** along with 2 people and 2 groups evaf sebastien_vigneau BioinfoCIPF SGU-CIPF
  • The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods.
    Nucleic Acids Res (25 May 2007)
    by Sebastien Moretti, Fabrice Armougom, Iain M M Wallace, Desmond G G Higgins, Cornelius V V Jongeneel, Cedric Notredame
    posted to algorithms alignment sequence sequence_alignment by marcius on 2007-06-04 10:12:59 as ** along with 2 people and 2 groups sebastien_vigneau marti BioinfoCIPF SGU-CIPF
  • RNA Sampler: A new sampling based algorithm for common RNA secondary structure prediction and structural alignment.
    Bioinformatics (30 May 2007)
    by Xing Xu, Yongmei Ji, Gary D D Stormo
    posted to rna structure_alignment by marcius on 2007-06-04 10:11:38 as ** along with 1 person and 3 groups cjeans Bioinformatics BioinfoCIPF SGU-CIPF
  • On the relationship between sequence and structure similarities in proteomics
    Bioinformatics, Vol. 23, No. 6. (15 March 2007), pp. 717-723.
    by K Evgeny
    posted to bioinformatics classification sequence-structure by marcius on 2007-04-12 10:48:28 as ** along with 1 person and 2 groups penka BioinfoCIPF SGU-CIPF
  • Deleterious SNP prediction: be mindful of your training data!
    Bioinformatics, Vol. 23, No. 6. (15 March 2007), pp. 664-672.
    by Care, A Matthew, Needham, J Chris, Bulpitt, J Andrew, Westhead, R David
    posted to bioinformatics snp by marcius on 2007-04-12 10:45:50 as ** along with 3 people and 2 groups happy_manatee penka Yumyai BioinfoCIPF SGU-CIPF
  • Multiple structural alignment and clustering of RNA sequences.
    Bioinformatics (25 February 2007)
    by Elfar Torarinsson, Jakob H H Havgaard, Jan Gorodkin
    posted to clustering rna secondary_structure structure_alignment by marcius on 2007-03-01 12:29:48 as ** along with 7 people and 2 groups eckart_bindewald eweaver ppgardne ilh zwang dunnp zhouyu BioinfoCIPF SGU-CIPF
  • Key biology databases go wiki
    Nature, Vol. 445, No. 7129. (14 February 2007), pp. 691-691.
    by Jim Giles
    posted to opensourcebiology web20 by marcius on 2007-02-15 17:39:08 as ** along with 9 people and 6 groups jyuh eweaver kehan raiyar grahamc leechuck PunkRock barriot mircea biodiversity_conservation Bioinformatics BioinfoCIPF SGU-CIPF steinmetzlab GrassBase
  • Modeling the Evolution of Protein Domain Architectures Using Maximum Parsimony
    Journal of Molecular Biology, Vol. 366, No. 1. (9 February 2007), pp. 307-315.
    by Jessica H Fong, Lewis Y Geer, Anna R Panchenko, Stephen H Bryant
    posted to protein_domains evolution bioinformatics algorithms by marcius on 2007-01-25 08:31:09 as ** along with 5 people and 3 groups icases tny choonpeng redelings zwang BioinfoCIPF SGU-CIPF TNT
  • Structural proteomics: from the molecule to the system
    Nature Structural & Molecular Biology, Vol. 14, No. 1., pp. 3-4.
    by Lucia Banci, Wolfgang Baumeister, Josefina Enfedaque, Udo Heinemann, Gunter Schneider, Israel Silman, Joel L Sussman
    posted to meeting proteomics review structural_genomics structure views by marcius on 2007-01-09 09:39:59 as ** along with 1 person and 2 groups gerry BioinfoCIPF SGU-CIPF
  • A combinatorial approach to create artificial homing endonucleases cleaving chosen sequences
    Nucleic Acids Research, Vol. 34, No. 22. (December 2006), pp. e149-e149.
    by J Smith, S Grizot, S Arnould, A Duclert, J Epinat, P Chames, J Prieto, P Redondo, F Blanco, J Bravo, G Montoya, F Paques, P Duchateau
    posted to bioengineering protein_design by marcius on 2007-01-03 13:03:20 as ** along with 2 groups BioinfoCIPF SGU-CIPF
  • Sequence comparison by sequence harmony identifies subtype-specific functional sites
    Nucleic Acids Research, Vol. 34, No. 22. (December 2006), pp. 6540-6548.
    by W Pirovano, KA Feenstra, J Heringa
    posted to bioinformatics classification function protein sequence_alignment by marcius on 2007-01-03 13:02:03 as ** along with 2 people and 2 groups sriram_s marti BioinfoCIPF SGU-CIPF
  • The interaction networks of structured RNAs
    Nucleic Acids Research, Vol. 34, No. 22. (December 2006), pp. 6587-6604.
    by A Lescoute, E Westhof
    posted to interaction rna secondary_structure by marcius on 2007-01-03 13:00:44 as ** along with 6 people and 2 groups austin reyez jennifermbui jarasch debatebob ankur_iitg BioinfoCIPF SGU-CIPF
  • RNAs everywhere: genome-wide annotation of structured RNAs.
    J Exp Zoolog B Mol Dev Evol (14 December 2006)
    by Rolf Backofen, Stephan H H Bernhart, Christoph Flamm, Claudia Fried, Guido Fritzsch, Jörg Hackermüller, Jana Hertel, Ivo L L Hofacker, Kristin Missal, Axel Mosig, Sonja J J Prohaska, Dominic Rose, Peter F F Stadler, Andrea Tanzer, Stefan Washietl, Sebastian Will
    posted to classification review rna by marcius on 2007-01-03 12:59:57 as ** along with 11 people and 5 groups jfr bala eckart_bindewald tardigrade andersbj penka cdawson ilh raylim jayster4 maralena microRNA BioinfoCIPF SGU-CIPF DictyosteliumGroup GIG
  • Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
    Bioinformatics, Vol. 23, No. 1. (1 January 2007), pp. 127-128.
    by Letunic, P Bork
    posted to phylogeny server software by marcius on 2007-01-03 12:55:33 as ** along with 4 people and 2 groups jyuh skhadar hpaces gjuggler BioinfoCIPF SGU-CIPF
  • SCOR: a Structural Classification of RNA database.
    Nucleic Acids Res, Vol. 30, No. 1. (1 January 2002), pp. 392-394.
    by PS Klosterman, M Tamura, SR Holbrook, SE Brenner
    posted to databases rna structure by marcius on 2006-12-21 14:21:00 as ** along with 1 person and 2 groups debatebob BioinfoCIPF SGU-CIPF
  • RNA structure: the long and the short of it.
    Curr Opin Struct Biol, Vol. 15, No. 3. (June 2005), pp. 302-308.
    by SR Holbrook
    posted to review rna structure by marcius on 2006-11-29 12:55:28 as ** along with 2 people and 2 groups eckart_bindewald debatebob BioinfoCIPF SGU-CIPF
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/user/marcius/order/to_read

    Result page: 1 2 3 4 5 6 7 8 9 10 Next RIS BibTeX RSS
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.