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knaseanka sub-bioinformatics [25 articles]

最近 knaseanka さんのライブラリに追加された論文の中から タグ sub-bioinformatics. You can also see everyone's sub-bioinformatics.
  • The Evolutionary Fate and Consequences of Duplicate Genes
    Science, Vol. 290, No. 5494. (10 November 2000), pp. 1151-1155.
    by Michael Lynch, John S Conery
    posted to birth death duplication sub-bioinformatics by knaseanka on 2006-12-18 12:51:19 as ***** along with 8 people and 1 group tharris arve nirfriedman echinotrix treangen timflutre BioNica clearbluespring C. elegans / WormBase
  • A basic result on the integral for birth-death Markov processes.
    Math Biosci, Vol. 161, No. 1-2. (October 1999), pp. 95-104.
    by CM Hernández-Suárez, C Castillo-Chavez
    posted to birth death mathematics stochastic sub-bioinformatics by knaseanka on 2006-12-15 10:26:03 as *****
  • Extinction times for a birth-death process with two phases.
    Math Biosci, Vol. 202, No. 2. (August 2006), pp. 310-322.
    by JV Ross, PK Pollett
    posted to birth death mathematics stochastic sub-bioinformatics by knaseanka on 2006-12-15 10:24:58 as *****
  • Modeling genome evolution with a diffusion approximation of a birth-and-death process.
    Bioinformatics, Vol. 21 Suppl 3 (1 November 2005)
    by GP Karev, FS Berezovskaya, EV Koonin
    posted to birth death stochastic sub-bioinformatics by knaseanka on 2006-12-15 10:24:30 as ** along with 1 group iSEEM
  • Simple stochastic birth and death models of genome evolution: was there enough time for us to evolve?
    Bioinformatics, Vol. 19, No. 15. (12 October 2003), pp. 1889-1900.
    by GP Karev, YI Wolf, EV Koonin
    posted to birth death stochastic sub-bioinformatics by knaseanka on 2006-12-15 10:24:13 as *** along with 1 person csgillespie
  • Birth and death of protein domains: a simple model of evolution explains power law behavior.
    BMC Evol Biol, Vol. 2, No. 1. (2002)
    by GP Karev, YI Wolf, AY Rzhetsky, FS Berezovskaya, EV Koonin
    posted to birth death stochastic sub-bioinformatics by knaseanka on 2006-12-15 10:23:53 as *** along with 1 person martainn
  • Gene family evolution: an in-depth theoretical and simulation analysis of non-linear birth-death-innovation models.
    BMC Evol Biol, Vol. 4 (9 September 2004)
    by GP Karev, YI Wolf, FS Berezovskaya, EV Koonin
    posted to birth death stochastic sub-bioinformatics by knaseanka on 2006-12-15 10:09:08 as ***** along with 1 person ruvido
  • Genome trees and the nature of genome evolution.
    Annu Rev Microbiol, Vol. 59 (2005), pp. 191-209.
    by B Snel, BE Dutilh
    posted to sub-bioinformatics by knaseanka on 2006-12-08 15:18:48 as ***** along with 2 people aprasad dayjm
  • Quality assessment of multiple alignment programs.
    FEBS Lett, Vol. 529, No. 1. (2 October 2002), pp. 126-130.
    by T Lassmann, EL Sonnhammer
    posted to sub-bioinformatics by knaseanka on 2006-11-29 12:05:53 as ** along with 1 person major724
  • Kalign--an accurate and fast multiple sequence alignment algorithm.
    BMC Bioinformatics, Vol. 6 (2005)
    by T Lassmann, EL Sonnhammer
    posted to sub-bioinformatics by knaseanka on 2006-11-29 12:05:11 as ** along with 2 people CharlesM Haggan
  • MUSCLE: a multiple sequence alignment method with reduced time and space complexity.
    BMC Bioinformatics, Vol. 5, No. 1. (19 August 2004)
    by RC Edgar
    posted to sub-bioinformatics by knaseanka on 2006-11-29 12:04:33 as ** along with 14 people and 3 groups sebk wallacei chrn jwm balajis gbart caporaso sriram_s cdallett sanchezbuelna timflutre gisle urgi Ema Radiation_Damage Stressosome biomedical-nlp
  • Toward Automatic Reconstruction of a Highly Resolved Tree of Life
    Science, Vol. 311, No. 5765. (3 March 2006), pp. 1283-1287.
    by Francesca D Ciccarelli, Tobias Doerks, Christian von Mering, Christopher J Creevey, Berend Snel, Peer Bork
    posted to sub-bioinformatics sub-phylogenetics by knaseanka on 2006-11-28 15:51:50 as **** along with 15 people and 6 groups kinestetika dparks Retchless dpollard tny dchughes nirfriedman cmm azazello wenhan maximilianh cmzmasek lonshy diamantis Ema microbiology_nijmegen EisenLab FAB-lab G4ID Genetics-of-Gambling MBLAB
  • Spectral clustering of protein sequences.
    Nucleic Acids Res, Vol. 34, No. 5. (2006), pp. 1571-1580.
    by A Paccanaro, JA Casbon, MA Saqi
    posted to sub-bioinformatics subsub-clustering subsub-method by knaseanka on 2006-06-22 13:02:46 as read along with 1 person bobychan
  • An efficient algorithm for large-scale detection of protein families.
    Nucleic Acids Res, Vol. 30, No. 7. (1 April 2002), pp. 1575-1584.
    by AJ Enright, S Van Dongen, CA Ouzounis
    posted to proj-alphaspec sub-bioinformatics subsub-clustering subsub-method by knaseanka on 2006-06-22 12:07:36 as read along with 12 people and 2 groups camster operon indigoviolet skhadar nirfriedman dgront entropy gcalda GustavoLacerda hpaces RebeccaHamer Borelli dbk-lab EisenLab
  • An application of statistics to comparative metagenomics.
    BMC Bioinformatics, Vol. 7, No. 1. (20 March 2006)
    by Beltran Rodriguez-Brito, Forest Rohwer, Robert Edwards
    posted to sub-bioinformatics sub-metagenomics by knaseanka on 2006-03-24 12:11:55 as *** along with 4 people and 1 group bluto jmeppley carpi djkt iSEEM
  • Bioinformatic Insights from Metagenomics through Visualization.
    Proc IEEE Comput Syst Bioinform Conf, Vol. 4 (2005), pp. 341-350.
    by Susan L Havre, Bobbie-Jo J Webb-Robertson, Anuj Shah, Christian Posse, Banu Gopalan, Fred J Brockman
    posted to sub-bioinformatics subsub-visualization by knaseanka on 2006-03-24 07:12:02 as *** along with 3 people jmeppley Schmidtc eweaver
  • Twenty thousand ORFan microbial protein families for the biologist?
    Structure, Vol. 11, No. 1. (January 2003), pp. 7-9.
    by N Siew, D Fischer
    posted to sub-bioinformatics sub-orfans to-exjobb by knaseanka on 2006-02-17 06:58:32 as **
  • Rapid quantitative profiling of complex microbial populations.
    Nucleic Acids Res, Vol. 34, No. 1. (2006)
    by C Palmer, EM Bik, MB Eisen, PB Eckburg, TR Sana, PK Wolber, DA Relman, PO Brown
    posted to sub-bioinformatics to-exjobb by knaseanka on 2006-01-27 14:04:25 as ** along with 1 person mcox
  • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
    Nucleic Acids Res, Vol. 25, No. 17. (1 September 1997), pp. 3389-3402.
    by SF Altschul, TL Madden, AA Schäffer, J Zhang, Z Zhang, W Miller, DJ Lipman
    posted to sub-bioinformatics type-method by knaseanka on 2006-01-15 13:05:36 as ** along with 46 people and 4 groups pwais dakelley setar iakes miguel kaarsinogen bjorns bicko jmeppley chad_davis balajis nuke2005 eweaver david_parsons indigoviolet dullhunk robert dgront happy_manatee caporaso treangen kengg manzanita leelarcombe CitoJam jdelcampo aengisch rabio massivemayhem mirzazadeh azazello sujaikumar beatrizfernandez GustavoLacerda siebertm adijr viktor21614 mijam grottenolm bandrewfox edvin newton1234 mariakmejia granujilla marti CharlesM EisenLab biomedical-nlp Microbial-Ecology Plantandetc
  • notes Computational Improvements Reveal Great Bacterial Diversity and High Metal Toxicity in Soil
    Science, Vol. 309, No. 5739. (26 August 2005), pp. 1387-1390.
    by Jason Gans, Murray Wolinsky, John Dunbar
    posted to sub-bioinformatics sub-metagenomics by knaseanka on 2006-01-13 08:50:47 as **** along with 4 people and 1 group jmeppley paleorthid jlgreen djkt iSEEM
  • Automatic discovery and classification of bioinformatics Web sources.
    Bioinformatics, Vol. 19, No. 15. (12 October 2003), pp. 1927-1933.
    by D Rocco, T Critchlow
    posted to sub-bioinformatics tech-webservices by knaseanka on 2005-10-14 07:49:26 as *** along with 1 person dullhunk
  • Bioinformatics and data management support for environmental genomics.
    PLoS Biol, Vol. 3, No. 8. (August 2005)
    by D Field, B Tiwari, J Snape
    posted to sub-metagenomics sub-bioinformatics by knaseanka on 2005-10-13 13:29:05 as read
  • PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information.
    BMC Bioinformatics, Vol. 6, No. 1. (2 March 2005)
    by F Angly, B Rodriguez-Brito, D Bangor, P McNairnie, M Breitbart, P Salamon, B Felts, J Nulton, J Mahaffy, F Rohwer
    posted to sub-bioinformatics sub-metagenomics by knaseanka on 2005-10-13 13:18:03 as **** along with 2 people jmeppley bluto
  • notes Bioinformatics for whole-genome shotgun sequencing of microbial communities.
    PLoS Comput Biol, Vol. 1, No. 2. (July 2005)
    by K Chen, L Pachter
    posted to sub-bioinformatics sub-metagenomics by knaseanka on 2005-10-13 10:43:11 as read along with 7 people and 3 groups ana jmeppley dullhunk bluto wenhan djkt druvus structural_bioinformatics Bioinformatics iSEEM
  • Multidimensional Vector Space Representation for Convergent Evolution and Molecular Phylogeny -- Kitazoe et al. 22 (3): 704 -- Molecular Biology and Evolution
    posted to sub-bioinformatics subsub-phylogeny by knaseanka on 2005-03-01 19:32:54 as ***
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