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jfr mirna [103 articles]

最近 jfr さんのライブラリに追加された論文の中から タグ mirna. You can also see everyone's mirna.
  • Argonaute--a database for gene regulation by mammalian microRNAs.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by P Shahi, S Loukianiouk, A Bohne-Lang, M Kenzelmann, S Küffer, S Maertens, R Eils, HJ Gröne, N Gretz, B Brors
    posted to mirna database by jfr on 2008-06-27 17:05:34 as read along with 2 people eckart_bindewald maralena
  • Real-time quantification of microRNAs by stem-loop RT-PCR.
    Nucleic Acids Res, Vol. 33, No. 20. (2005)
    by C Chen, DA Ridzon, AJ Broomer, Z Zhou, DH Lee, JT Nguyen, M Barbisin, NL Xu, VR Mahuvakar, MR Andersen, KQ Lao, KJ Livak, KJ Guegler
    posted to tech rt-pcr mirna by jfr on 2008-06-27 13:26:48 as read along with 2 people and 1 group imouthesmp cdawson GIG
  • MicroRNAs accurately identify cancer tissue origin.
    Nat Biotechnol (23 March 2008)
    by Nitzan Rosenfeld, Ranit Aharonov, Eti Meiri, Shai Rosenwald, Yael Spector, Merav Zepeniuk, Hila Benjamin, Norberto Shabes, Sarit Tabak, Asaf Levy, Danit Lebanony, Yaron Goren, Erez Silberschein, Nurit Targan, Alex Ben-Ari, Shlomit Gilad, Netta Sion-Vardy, Ana Tobar, Meora Feinmesser, Oleg Kharenko, Ofer Nativ, Dvora Nass, Marina Perelman, Ady Yosepovich, Bruria Shalmon, Sylvie Polak-Charcon, Eddie Fridman, Amir Avniel, Isaac Bentwich, Zvi Bentwich, Dalia Cohen, Ayelet Chajut, Iris Barshack
    posted to tissue_specificity mirna cancer by jfr on 2008-06-27 11:23:51 as read along with 7 people bootsy ealloza jyuh giovenko tmmurali jdiezperezj maralena
  • Discovering microRNAs from deep sequencing data using miRDeep
    Nature Biotechnology, Vol. 26, No. 4., pp. 407-415.
    by Marc R Friedländer, Wei Chen, Catherine Adamidi, Jonas Maaskola, Ralf Einspanier, Signe Knespel, Nikolaus Rajewsky
    posted to mirna deep_sequencing by jfr on 2008-06-27 09:11:18 as **** along with 3 people and 1 group stajich tmmurali giovanni Berkeley Mycology
  • Small is beautiful: microRNAs and breast cancer-where are we now?
    The Journal of pathology, Vol. 215, No. 3. (July 2008), pp. 214-221.
    by E Verghese, A Hanby, V Speirs, T Hughes
    posted to review mirna breast_cancer by jfr on 2008-06-27 09:09:35 as **
  • microRNAs exhibit high frequency genomic alterations in human cancer.
    Proc Natl Acad Sci U S A (5 June 2006)
    by Lin Zhang, Jia Huang, Nuo Yang, Joel Greshock, Molly S S Megraw, Antonis Giannakakis, Shun Liang, Tara L L Naylor, Andrea Barchetti, Michelle R R Ward, George Yao, Angelica Medina, Ann O'brien-Jenkins, Dionyssios Katsaros, Artemis Hatzigeorgiou, Phyllis A A Gimotty, Barbara L L Weber, George Coukos
    posted to mirna copy-number by jfr on 2008-06-20 11:53:33 as read along with 6 people and 2 groups maralena eckart_bindewald mtagaya cmm ealloza Garamonfok FAB-lab BioinfoCIPF
  • miR-Q: a novel quantitative RT-PCR approach for the expression profiling of small RNA molecules such as miRNAs in a complex sample
    BMC Molecular Biology, Vol. 9 (10 April 2008), 34.
    by Soroush Sharbati-Tehrani, Barbara Kutz-Lohroff, Ramona Bergbauer, Jutta Scholven, Ralf Einspanier
    posted to tech rt-pcr mirna by jfr on 2008-06-17 17:49:38 as **
  • Inter- and intra-combinatorial regulation by transcription factors and microRNAs
    BMC Genomics, Vol. 8 (30 October 2007), 396.
    by Yiming Zhou, John Ferguson, Joseph T Chang, Yuval Kluger
    posted to tfbs regulation mirna by jfr on 2008-06-11 09:33:33 as *** along with 4 people and 1 group heliopais bootsy eckart_bindewald maralena microRNA
  • MicroRNA expression profiling using microarrays.
    Nature protocols, Vol. 3, No. 4. (2008), pp. 563-578.
    by CG Liu, GA Calin, S Volinia, CM Croce
    posted to mirna microarray_technology by jfr on 2008-05-21 13:41:15 as **
  • Polymorphisms within micro-RNA binding sites and risk of sporadic colorectal cancer.
    Carcinogenesis (12 January 2008)
    by Debora Landi, Federica Gemignani, Alessio Naccarati, Barbara Pardini, Pavel Vodicka, Ludmila Vodickova, Jan Novotny, Asta Försti, Kari Hemminki, Federico Canzian, Stefano Landi
    posted to snp mirna colon_cancer by jfr on 2008-05-21 13:16:44 as **
  • Comprehensive MicroRNA Profiling Reveals a Unique Human Embryonic Stem Cell Signature Dominated by a Single Seed Sequence
    Stem Cells (10 April 2008), 2007-1081.
    by Louise C Laurent, Jing Chen, Igor Ulitsky, Franz J Mueller, Christina Lu, Ron Shamir, Jian B Fan, Jeanne F Loring
    posted to stem_cell mirna by jfr on 2008-05-19 11:42:27 as **** along with 1 person and 1 group slevy03 VUMCGenomics
  • Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    Genome Res. (19 February 2008), gr.7179508.
    by Ryan D Morin, Michael D O'Connor, Malachi Griffith, Florian Kuchenbauer, Allen Delaney, Anna-Liisa Prabhu, Yongjun Zhao, Helen Mcdonald, Thomas Zeng, Martin Hirst, Connie J Eaves, Marco A Marra
    posted to stem_cell mirna deep_sequencing by jfr on 2008-05-16 10:35:12 as ** along with 3 people and 1 group caseybrown stajich maralena Berkeley Mycology
  • Oncomirs — microRNAs with a role in cancer
    Nature Reviews Cancer, Vol. 6, No. 4., pp. 259-269.
    by Aurora Esquela-Kerscher, Frank J Slack
    posted to review mirna by jfr on 2008-05-16 10:05:34 as read along with 7 people and 6 groups jyuh marcius eckart_bindewald xico dchughes cdawson ealloza WetBiology G4ID BioinfoCIPF SGU-CIPF GIG Genetics-of-Gambling
  • Computational Modeling of Post-Transcriptional Gene Regulation by MicroRNAs.
    J Comput Biol (11 March 2008)
    by Raya Khanin, Veronica Vinciotti
    posted to regulation mirna methodology by jfr on 2008-05-05 15:48:09 as ** along with 5 people and 1 group heliopais jyuh bootsy eckart_bindewald maralena microRNA
  • Ab initio identification of human microRNAs based on structure motifs
    BMC Bioinformatics, Vol. 8 (18 December 2007), 478.
    by Markus Brameier, Carsten Wiuf
    posted to mirna methodology by jfr on 2008-05-05 11:07:56 as ** along with 1 person sventura
  • Discriminating single-base difference miRNA expressions using microarray Probe Design Guru (ProDeG)
    Nucl. Acids Res., Vol. 36, No. 5. (1 March 2008), e27.
    by Inhan Lee, Subramanian S Ajay, Haiming Chen, Atsushi Maruyama, Nulang Wang, Melvin G Mcinnis, Brian D Athey
    posted to probe_design mirna microarray_technology by jfr on 2008-04-23 13:16:30 as ** along with 1 person jyuh
  • Characterization of microRNA expression profiles in normal human tissues
    BMC Genomics, Vol. 8 (12 June 2007), 166.
    by Yu Liang, Dana Ridzon, Linda Wong, Caifu Chen
    posted to gene_expression mirna by jfr on 2008-04-22 06:57:19 as read along with 3 people and 2 groups frohike bootsy heliopais Bioinformatics microRNA
  • Aberrant allele frequencies of the SNPs located in microRNA target sites are potentially associated with human cancers.
    Nucleic Acids Res (21 June 2007)
    by Zhenbao Yu, Zhen Li, Normand Jolicoeur, Linhua Zhang, Yves Fortin, Edwin Wang, Meiqun Wu, Shi-Hsiang H Shen
    posted to mirna snp by jfr on 2008-04-21 09:23:43 as read along with 2 people and 2 groups andersbj cabbagezs Bioinformatics microRNA
  • Human polymorphism at microRNAs and microRNA target sites
    PNAS, Vol. 104, No. 9. (27 February 2007), pp. 3300-3305.
    by Matthew A Saunders, Han Liang, Wen-Hsiung Li
    posted to mirna snp by jfr on 2008-04-21 09:16:58 as ** along with 2 people and 3 groups dchughes heliopais microRNA G4ID Genetics-of-Gambling
  • Characterization of microRNA expression levels and their biological correlates in human cancer cell lines.
    Cancer Res, Vol. 67, No. 6. (15 March 2007), pp. 2456-2468.
    by A Gaur, DA Jewell, Y Liang, D Ridzon, JH Moore, C Chen, VR Ambros, MA Israel
    posted to mirna nci60 by jfr on 2008-04-21 09:12:26 as **** along with 2 people and 1 group ealloza elzodw BioinfoCIPF
  • Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes.
    RNA, Vol. 11, No. 3. (March 2005), pp. 241-247.
    by S Baskerville, DP Bartel
    posted to co-expression mirna by jfr on 2008-04-21 09:09:39 as **** along with 4 people and 1 group mtagaya ealloza lp2 heliopais microRNA
  • Profiling microRNA expression with microarrays
    Trends in Biotechnology, Vol. 26, No. 2. (February 2008), pp. 70-76.
    by James Q Yin, Robert C Zhao, Kevin V Morris
    posted to microarray_technology mirna by jfr on 2008-04-18 14:10:15 as ** along with 2 people jyuh dchughes
  • Switching from Repression to Activation: MicroRNAs Can Up-Regulate Translation
    Science (29 November 2007), 1149460.
    by Shobha Vasudevan, Yingchun Tong, Joan A Steitz
    posted to mirna by jfr on 2008-04-18 10:25:46 as *** along with 11 people and 2 groups tmmurali dayjm balicea dchughes sebastien_vigneau maximilianh heliopais oelemento wsjames delenca maralena microRNA Oxford Virology
  • miChip: an array-based method for microRNA expression profiling using locked nucleic acid capture probes.
    Nature protocols, Vol. 3, No. 2. (2008), pp. 321-329.
    by M Castoldi, S Schmidt, V Benes, MW Hentze, MU Muckenthaler
    posted to microarray_technology mirna by jfr on 2008-04-17 14:07:30 as **
  • OncomiRs: the discovery and progress of microRNAs in cancers
    Molecular Cancer, Vol. 6 (25 September 2007), 60.
    by William CS Cho
    posted to mirna review by jfr on 2008-04-14 16:50:36 as read along with 2 people jyuh ealloza
  • Expression profiling of microRNA using oligo DNA arrays
    Methods, Vol. 44, No. 1. (January 2008), pp. 22-30.
    by Chang-Gong Liu, Riccardo Spizzo, George A Calin, Carlo M Croce
    posted to microarray_technology mirna tech by jfr on 2008-04-14 11:06:02 as * along with 1 person jyuh
  • Prediction and preliminary validation of oncogene regulation by miRNAs
    BMC Molecular Biology, Vol. 8 (18 September 2007), 79.
    by Edyta Koscianska, Vesselin Baev, Konstantinia Skreka, Katerina Oikonomaki, Ventsislav Rusinov, Martin Tabler, Kriton Kalantidis
    posted to mirna by jfr on 2008-04-11 18:39:58 as ****
  • Endogenous human microRNAs that suppress breast cancer metastasis
    Nature, Vol. 451, No. 7175., pp. 147-152.
    by Sohail F Tavazoie, Claudio Alarcón, Thordur Oskarsson, David Padua, Qiongqing Wang, Paula D Bos, William L Gerald, Joan Massagué
    posted to breast_cancer metastasis mirna by jfr on 2008-04-11 16:27:07 as *** along with 3 people and 1 group heliopais mtagaya lp2 microRNA
  • Natural selection on human microRNA binding sites inferred from SNP data.
    Nat Genet (29 October 2006)
    by Kevin Chen, Nikolaus Rajewsky
    posted to mirna by jfr on 2008-04-09 14:47:24 as **** along with 7 people and 3 groups tardigrade andersbj mtagaya ealloza plofje Garamonfok heliopais Bioinformatics microRNA BioinfoCIPF
  • A biochemical approach to identifying microRNA targets
    Proceedings of the National Academy of Sciences (27 November 2007), 0709971104.
    by Fedor V Karginov, Cecilia Conaco, Zhenyu Xuan, Bryan H Schmidt, Joel S Parker, Gail Mandel, Gregory J Hannon
    posted to mirna mirna_target by jfr on 2008-04-09 14:37:07 as ** along with 5 people and 1 group jyuh heliopais fpattyn wsjames maralena microRNA
  • miRGator: an integrated system for functional annotation of microRNAs.
    Nucleic Acids Res (16 October 2007)
    by Seungyoon Nam, Bumjin Kim, Seokmin Shin, Sanghyuk Lee
    posted to database mirna resource by jfr on 2008-04-09 14:28:06 as read along with 2 people ealloza maralena
  • miRBase: tools for microRNA genomics.
    Nucleic Acids Res (8 November 2007)
    by Sam Griffiths-Jones, Harpreet Kaur K Saini, Stijn van V Dongen, Anton J J Enright
    posted to database mirna resource by jfr on 2008-04-09 14:27:07 as read along with 2 people jyuh cabbagezs
  • The microRNA.org resource: targets and expression.
    Nucleic Acids Res (23 December 2007)
    by Doron Betel, Manda Wilson, Aaron Gabow, Debora S S Marks, Chris Sander
    posted to database mirna resource by jfr on 2008-04-09 14:25:59 as read along with 4 people bootsy jyuh heliopais maralena
  • Prediction of both conserved and nonconserved microRNA targets in animals
    Bioinformatics (29 November 2007), btm595.
    by Xiaowei Wang, El
    posted to bioinformatics mirna mirna_target by jfr on 2008-04-09 14:23:45 as *** along with 5 people and 1 group jyuh bootsy lp2 heliopais Alexander_Kanitz microRNA
  • Ultraconserved Regions Encoding ncRNAs Are Altered in Human Leukemias and Carcinomas.
    Cancer Cell, Vol. 12, No. 3. (September 2007), pp. 215-229.
    by GA Calin, CG Liu, M Ferracin, T Hyslop, R Spizzo, C Sevignani, M Fabbri, A Cimmino, EJ Lee, SE Wojcik, M Shimizu, E Tili, S Rossi, C Taccioli, F Pichiorri, X Liu, S Zupo, V Herlea, L Gramantieri, G Lanza, H Alder, L Rassenti, S Volinia, TD Schmittgen, TJ Kipps, M Negrini, CM Croce
    posted to mirna non-coding ucr by jfr on 2008-04-09 12:56:36 as **** along with 3 people and 1 group andersbj maximilianh fpattyn microRNA
  • mRNA/microRNA gene expression profile in microsatellite unstable colorectal cancer
    Molecular Cancer, Vol. 6 (23 August 2007), 54.
    by Giovanni Lanza, Manuela Ferracin, Roberta Gafa, Angelo Veronese, Riccardo Spizzo, Flavia Pichiorri, Chang-Gong Liu, George A Calin, Carlo M Croce, Massimo Negrini
    posted to colon_cancer gene_expression mirna msi by jfr on 2008-04-09 12:46:13 as **
  • A Mammalian microRNA Expression Atlas Based on Small RNA Library Sequencing.
    Cell, Vol. 129, No. 7. (29 June 2007), pp. 1401-1414.
    by P Landgraf, M Rusu, R Sheridan, A Sewer, N Iovino, A Aravin, S Pfeffer, A Rice, AO Kamphorst, M Landthaler, C Lin, ND Socci, L Hermida, V Fulci, S Chiaretti, R Foà, J Schliwka, U Fuchs, A Novosel, RU Müller, B Schermer, U Bissels, J Inman, Q Phan, M Chien, DB Weir, R Choksi, G De Vita, D Frezzetti, HI Trompeter, V Hornung, G Teng, G Hartmann, M Palkovits, R Di Lauro, P Wernet, G Macino, CE Rogler, JW Nagle, J Ju, FN Papavasiliou, T Benzing, P Lichter, W Tam, MJ Brownstein, A Bosio, A Borkhardt, JJ Russo, C Sander, M Zavolan, T Tuschl
    posted to mirna tech by jfr on 2008-04-09 11:39:58 as ** along with 8 people and 2 groups delenca giovenko jyuh andersbj rahulthadani xiuminyan heliopais maralena Bioinformatics microRNA
  • Prognostic Values of microRNAs in Colorectal Cancer.
    Biomark Insights, Vol. 2 (2006), pp. 113-121.
    by Yaguang Xi, Andrea Formentini, Minchen Chien, David B B Weir, James J J Russo, Jingyue Ju, Marko Kornmann, Jingfang Ju
    posted to colon_cancer mirna prognostic by jfr on 2008-04-09 11:33:35 as read
  • Computational analysis of biological functions and pathways collectively targeted by co-expressed microRNAs in cancer
    BMC Bioinformatics, Vol. 8, No. Suppl 7. (2007)
    by Yuriy Gusev, Thomas Schmittgen, Megan Lerner, Russell Postier, Daniel Brackett
    posted to cancer integration mirna by jfr on 2008-04-09 11:25:50 as read along with 5 people eckart_bindewald ealloza vinithepooh yugusev maralena
  • Investigation of miRNA Biology by Bioinformatic Tools and Impact of miRNAs in Colorectal Cancer-Regulatory Relationship of c-Myc and p53 with miRNAs.
    Cancer Inform, Vol. 3 (2007), pp. 245-253.
    by Yaguang Xi, John R R Edwards, Jingfang Ju
    posted to colon_cancer mirna p53 review by jfr on 2008-04-08 17:35:15 as read
  • MicroRNA expression profiles associated with prognosis and therapeutic outcome in colon adenocarcinoma.
    JAMA, Vol. 299, No. 4. (30 January 2008), pp. 425-436.
    by AJ Schetter, SY Leung, JJ Sohn, KA Zanetti, ED Bowman, N Yanaihara, ST Yuen, TL Chan, DL Kwong, GK Au, CG Liu, GA Calin, CM Croce, CC Harris
    posted to colon_cancer mirna prognosis therapy by jfr on 2008-03-11 10:36:19 as read
  • The colorectal microRNAome.
    Proc Natl Acad Sci U S A (27 February 2006)
    by Jordan M M Cummins, Yiping He, Rebecca J J Leary, Ray Pagliarini, Luis A A Diaz, Tobias Sjoblom, Omer Barad, Zvi Bentwich, Anna E E Szafranska, Emmanuel Labourier, Christopher K K Raymond, Brian S S Roberts, Hartmut Juhl, Kenneth W W Kinzler, Bert Vogelstein, Victor E E Velculescu
    posted to colon_cancer mirna sage by jfr on 2008-02-07 11:26:40 as read along with 6 people and 3 groups jyuh marcius eckart_bindewald andersbj mtagaya cpnP microRNA BioinfoCIPF SGU-CIPF
  • Inference of miRNA targets using evolutionary conservation and pathway analysis
    BMC Bioinformatics, Vol. 8 (01 March 2007), 69.
    by Dimos Gaidatzis, Erik van Nimwegen, Jean Hausser, Mihaela Zavolan
    posted to mirna_target mirna by jfr on 2008-02-06 13:18:07 as ** along with 6 people and 1 group tardigrade andersbj dquest Garamonfok heliopais maralena microRNA
  • Using expression profiling data to identify human microRNA targets
    Nat Meth, Vol. 4, No. 12. (December 2007), pp. 1045-1049.
    by Jim C Huang, Tomas Babak, Timothy W Corson, Gordon Chua, Sofia Khan, Brenda L Gallie, Timothy R Hughes, Benjamin J Blencowe, Brendan J Frey, Quaid D Morris
    posted to mirna by jfr on 2008-02-06 13:09:28 as ** along with 9 people and 1 group jyuh heliopais tmmurali cjeans lp2 capitall fpattyn Alexander_Kanitz megraw microRNA
  • Are microRNAs located in genomic regions associated with cancer?
    British Journal of Cancer, Vol. aop, No. current. (26 September 2006)
    by P Lamy, CL Andersen, L Dyrskjot, N Torring, T Orntoft, C Wiuf
    posted to mirna by jfr on 2008-02-05 12:15:54 as *** along with 3 people and 2 groups andersbj ealloza Garamonfok microRNA BioinfoCIPF
  • Most Caenorhabditis elegans microRNAs Are Individually Not Essential for Development or Viability
    PLoS Genetics, Vol. 3, No. 12. (1 December 2007), e215.
    by Eric A Miska, Ezequiel Alvarez-Saavedra, Allison L Abbott, Nelson C Lau, Andrew B Hellman, Shannon M Mcgonagle, David P Bartel, Victor R Ambros, Robert H Horvitz
    posted to mirna by jfr on 2008-02-05 11:53:59 as ** along with 3 people and 2 groups bootsy stajich heliopais microRNA Berkeley Mycology
  • The roles of binding site arrangement and combinatorial targeting in microRNA repression of gene expression
    Genome Biology, Vol. 8 (14 August 2007), R166.
    by Lawrence S Hon, Zemin Zhang
    posted to mirna by jfr on 2008-02-04 13:36:38 as ** along with 2 people and 2 groups andersbj heliopais Bioinformatics microRNA
  • MicroRNA expression profiles for the NCI-60 cancer cell panel
    Mol Cancer Ther, Vol. 6, No. 5. (1 May 2007), pp. 1483-1491.
    by Paul E Blower, Joseph S Verducci, Shili Lin, Jin Zhou, Ji-Hyun Chung, Zunyan Dai, Chang-Gong Liu, William Reinhold, Philip L Lorenzi, Eric P Kaldjian, Carlo M Croce, John N Weinstein, Wolfgang Sadee
    posted to mirna nci60 by jfr on 2007-12-17 12:10:12 as **** along with 1 person elzodw
  • MicroRNA expression profiling of human breast cancer identifies new markers of tumour subtype
    Genome Biology, Vol. 8 (08 October 2007), R214.
    by Cherie Blenkiron, Leonard D Goldstein, Natalie P Thorne, Inmaculada Spiteri, Suet-Feung Chin, Mark J Dunning, Nuno L Barbosa-Morais, Andrew E Teschendorff, Andrew R Green, Ian O Ellis, Simon Tavare, Carlos Caldas, Eric A Miska
    posted to breast_cancer mirna subtype by jfr on 2007-12-07 17:53:45 as *** along with 3 people and 1 group giovenko ealloza heliopais microRNA
  • Tumour invasion and metastasis initiated by microRNA-10b in breast cancer
    Nature (26 September 2007)
    by Li Ma, Julie Teruya-Feldstein, Robert A Weinberg
    posted to metastasis mirna by jfr on 2007-12-07 17:22:38 as *** along with 3 people and 1 group maralena ealloza heliopais microRNA
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