Nature, Vol. 452, No. 7189. (17 April 2008), pp. 872-876.
by David A
Wheeler, Maithreyan
Srinivasan, Michael
Egholm, Yufeng
Shen, Lei
Chen, Amy
Mcguire, Wen
He, Yi-Ju
Chen, Vinod
Makhijani, Thomas G
Roth, Xavier
Gomes, Karrie
Tartaro, Faheem
Niazi, Cynthia L
Turcotte, Gerard P
Irzyk, James R
Lupski, Craig
Chinault, Xing-Zhi
Song, Yue
Liu, Ye
Yuan, Lynne
Nazareth, Xiang
Qin, Donna M
Muzny, Marcel
Margulies, George M
Weinstock, Richard A
Gibbs, Jonathan M
Rothberg
Nat Rev Cancer, Vol. 8, No. 1. (January 2008), pp. 37-49.
Mol Syst Biol, Vol. 3 (18 December 2007)
by Qinghua
Cui, Yun
Ma, Maria
Jaramillo, Hamza
Bari, Arif
Awan, Song
Yang, Simo
Zhang, Lixue
Liu, Meng
Lu, Maureen
O'Connor-Mccourt, Enrico O
Purisima, Edwin
Wang
Computers in biology and medicine, Vol. 38, No. 5. (May 2008), pp. 601-610.
BMC Genomics, Vol. 9 (21 May 2008), 236.
Mol Syst Biol, Vol. 3 (13 March 2007)
Cancer cell, Vol. 9, No. 4. (April 2006), pp. 245-247.
posted to
comment by
jfr
on 2008-07-21 14:32:45
as
Journal of biomedical informatics, Vol. 41, No. 4. (August 2008), pp. 570-579.
Nucleic acids research, Vol. 36, No. 2. (February 2008)
Cancer research, Vol. 68, No. 8. (15 April 2008), pp. 2661-2670.
by MO
Hoque, MS
Kim, KL
Ostrow, J
Liu, GB
Wisman, HL
Park, ML
Poeta, C
Jeronimo, R
Henrique, A
Lendvai, E
Schuuring, S
Begum, E
Rosenbaum, M
Ongenaert, K
Yamashita, J
Califano, W
Westra, AG
van der Zee, W
Van Criekinge, D
Sidransky
BMC Genomics, Vol. 9, No. Suppl 1. (2008)
Genes, chromosomes & cancer, Vol. 45, No. 11. (November 2006), pp. 1018-1032.
by W
Liu, B
Chang, J
Sauvageot, L
Dimitrov, M
Gielzak, T
Li, G
Yan, J
Sun, J
Sun, TS
Adams, AR
Turner, JW
Kim, DA
Meyers, SL
Zheng, WB
Isaacs, J
Xu
Nature protocols, Vol. 3, No. 4. (2008), pp. 563-578.
Journal of Computational Biology, Vol. 0, No. 0. (0), pp. 1-9.
Nature Biotechnology, Vol. 26, No. 3. (07 March 2008), pp. 305-312.
by Eric W
Deutsch, Catherine A
Ball, Jules J
Berman, Steven G
Bova, Alvis
Brazma, Roger E
Bumgarner, David
Campbell, Helen C
Causton, Jeffrey H
Christiansen, Fabrice
Daian, Delphine
Dauga, Duncan R
Davidson, Gregory
Gimenez, Young A
Goo, Sean
Grimmond, Thorsten
Henrich, Bernhard G
Herrmann, Michael H
Johnson, Martin
Korb, Jason C
Mills, Asa J
Oudes, Helen E
Parkinson, Laura E
Pascal, Nicolas
Pollet, John
Quackenbush, Mirana
Ramialison, Martin
Ringwald, David
Salgado, Susanna-Assunta
Sansone, Gavin
Sherlock, Christian J
Stoeckert, Jason
Swedlow, Ronald C
Taylor, Laura
Walashek, Anthony
Warford, David G
Wilkinson, Yi
Zhou, Leonard I
Zon, Alvin Y
Liu, Lawrence D
True
Journal of Biomedical Informatics, Vol. In Press, Accepted Manuscript
Genome Res. (7 February 2008), gr.7080508.
by David S
Johnson, Wei
Li, Benjamin D
Gordon, Arindam
Bhattacharjee, Bo
Curry, Jayati
Ghosh, Leonardo
Brizuela, Jason S
Carroll, Myles
Brown, Paul
Flicek, Christopher M
Koch, Ian
Dunham, Mark
Bieda, Xiaoqin
Xu, Peggy J
Farnham, Philipp
Kapranov, David A
Nix, Thomas R
Gingeras, Xinmin
Zhang, Heather
Holster, Nan
Jiang, Roland
Green, Jun S
Song, Scott A
Mccuine, Elizabeth
Anton, Loan
Nguyen, Nathan D
Trinklein, Zhen
Ye, Keith
Ching, David
Hawkins, Bing
Ren, Peter C
Scacheri, Joel
Rozowsky, Alexander
Karpikov, Ghia
Euskirchen, Sherman
Weissman, Mark
Gerstein, Michael
Snyder, Annie
Yang, Zarmik
Moqtaderi, Heather
Hirsch, Hennady P
Shulha, Yutao
Fu, Zhiping
Weng, Kevin
Struhl, Richard M
Myers, Jason D
Lieb, Shirley X
Liu
Bioinformatics (19 January 2007)
Methods, Vol. 44, No. 1. (January 2008), pp. 22-30.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2007), pp. 76-87.
BMC Bioinformatics, Vol. 8 (07 November 2007), 431.
Cancer Cell, Vol. 12, No. 3. (September 2007), pp. 215-229.
by GA
Calin, CG
Liu, M
Ferracin, T
Hyslop, R
Spizzo, C
Sevignani, M
Fabbri, A
Cimmino, EJ
Lee, SE
Wojcik, M
Shimizu, E
Tili, S
Rossi, C
Taccioli, F
Pichiorri, X
Liu, S
Zupo, V
Herlea, L
Gramantieri, G
Lanza, H
Alder, L
Rassenti, S
Volinia, TD
Schmittgen, TJ
Kipps, M
Negrini, CM
Croce
Molecular Cancer, Vol. 6 (23 August 2007), 54.
Bioinformatics (15 November 2007)
by Da
Yang, Yanhui
Li, Hui
Xiao, Qing
Liu, Min
Zhang, Jing
Zhu, Wencai
Ma, Chen
Yao, Jing
Wang, Dong
Wang, Zheng
Guo, Baofeng
Yang
Science, Vol. 309, No. 5740. (2 September 2005), pp. 1559-1563.
by P
Carninci, T
Kasukawa, S
Katayama, J
Gough, MC
Frith, N
Maeda, R
Oyama, T
Ravasi, B
Lenhard, C
Wells, R
Kodzius, K
Shimokawa, VB
Bajic, SE
Brenner, S
Batalov, AR
Forrest, M
Zavolan, MJ
Davis, LG
Wilming, V
Aidinis, JE
Allen, A
Ambesi-Impiombato, R
Apweiler, RN
Aturaliya, TL
Bailey, M
Bansal, L
Baxter, KW
Beisel, T
Bersano, H
Bono, AM
Chalk, KP
Chiu, V
Choudhary, A
Christoffels, DR
Clutterbuck, ML
Crowe, E
Dalla, BP
Dalrymple, B
de Bono, G
Della Gatta, D
di Bernardo, T
Down, P
Engstrom, M
Fagiolini, G
Faulkner, CF
Fletcher, T
Fukushima, M
Furuno, S
Futaki, M
Gariboldi, P
Georgii-Hemming, TR
Gingeras, T
Gojobori, RE
Green, S
Gustincich, M
Harbers, Y
Hayashi, TK
Hensch, N
Hirokawa, D
Hill, L
Huminiecki, M
Iacono, K
Ikeo, A
Iwama, T
Ishikawa, M
Jakt, A
Kanapin, M
Katoh, Y
Kawasawa, J
Kelso, H
Kitamura, H
Kitano, G
Kollias, SP
Krishnan, A
Kruger, SK
Kummerfeld, IV
Kurochkin, LF
Lareau, D
Lazarevic, L
Lipovich, J
Liu, S
Liuni, S
McWilliam, M
Madan Babu, M
Madera, L
Marchionni, H
Matsuda, S
Matsuzawa, H
Miki, F
Mignone, S
Miyake, K
Morris, S
Mottagui-Tabar, N
Mulder, N
Nakano, H
Nakauchi, P
Ng, R
Nilsson, S
Nishiguchi, S
Nishikawa, F
Nori, O
Ohara, Y
Okazaki, V
Orlando, KC
Pang, WJ
Pavan, G
Pavesi, G
Pesole, N
Petrovsky, S
Piazza, J
Reed, JF
Reid, BZ
Ring, M
Ringwald, B
Rost, Y
Ruan, SL
Salzberg, A
Sandelin, C
Schneider, C
Schönbach, K
Sekiguchi, CA
Semple, S
Seno, L
Sessa, Y
Sheng, Y
Shibata, H
Shimada, K
Shimada, D
Silva, B
Sinclair, S
Sperling, E
Stupka, K
Sugiura, R
Sultana, Y
Takenaka, K
Taki, K
Tammoja, SL
Tan, S
Tang, MS
Taylor, J
Tegner, SA
Teichmann, HR
Ueda, E
van Nimwegen, R
Verardo, CL
Wei, K
Yagi, H
Yamanishi, E
Zabarovsky, S
Zhu, A
Zimmer, W
Hide, C
Bult, SM
Grimmond, RD
Teasdale, ET
Liu, V
Brusic, J
Quackenbush, C
Wahlestedt, JS
Mattick, DA
Hume, C
Kai, D
Sasaki, Y
Tomaru, S
Fukuda, M
Kanamori-Katayama, M
Suzuki, J
Aoki, T
Arakawa, J
Iida, K
Imamura, M
Itoh, T
Kato, H
Kawaji, N
Kawagashira, T
Kawashima, M
Kojima, S
Kondo, H
Konno, K
Nakano, N
Ninomiya, T
Nishio, M
Okada, C
Plessy, K
Shibata, T
Shiraki, S
Suzuki, M
Tagami, K
Waki, A
Watahiki, Y
Okamura-Oho, H
Suzuki, J
Kawai, Y
Hayashizaki,
,
JAMA, Vol. 299, No. 4. (30 January 2008), pp. 425-436.
by AJ
Schetter, SY
Leung, JJ
Sohn, KA
Zanetti, ED
Bowman, N
Yanaihara, ST
Yuen, TL
Chan, DL
Kwong, GK
Au, CG
Liu, GA
Calin, CM
Croce, CC
Harris
N Engl J Med, Vol. 331, No. 4. (28 July 1994), pp. 213-221.
Genome Res (5 October 2007)
BMC Bioinformatics, Vol. 7 (2006)
by J
Huang, W
Wei, J
Chen, J
Zhang, G
Liu, X
Di, R
Mei, S
Ishikawa, H
Aburatani, KW
Jones, MH
Shapero
Oncogene, Vol. 21, No. 31. (18 July 2002), pp. 4855-4862.
by TT
Zou, FM
Selaru, Y
Xu, V
Shustova, J
Yin, Y
Mori, D
Shibata, F
Sato, S
Wang, A
Olaru, E
Deacu, TC
Liu, JM
Abraham, SJ
Meltzer
Bioinformatics, Vol. 21, No. 9. (1 May 2005), pp. 1958-1963.
by X
Di, H
Matsuzaki, TA
Webster, E
Hubbell, G
Liu, S
Dong, D
Bartell, J
Huang, R
Chiles, G
Yang, MM
Shen, D
Kulp, GC
Kennedy, R
Mei, KW
Jones, S
Cawley
Cancer Res, Vol. 66, No. 7. (1 April 2006), pp. 3471-3479.
by Michelle
Gaasenbeek, Kimberley
Howarth, Andrew J
Rowan, Patricia A
Gorman, Angela
Jones, Tracy
Chaplin, Ying
Liu, David
Bicknell, Eleanor J
Davison, Heike
Fiegler, Nigel P
Carter, Rebecca R
Roylance, Ian P
Tomlinson
Cancer Res, Vol. 66, No. 4. (15 February 2006), pp. 2129-2137.
by Dafna
Tsafrir, Manny
Bacolod, Zachariah
Selvanayagam, Ilan
Tsafrir, Jinru
Shia, Zhaoshi
Zeng, Hao
Liu, Curtis
Krier, Robert F
Stengel, Francis
Barany, William L
Gerald, Philip B
Paty, Eytan
Domany, Daniel A
Notterman
Genome Biology, Vol. 8 (29 August 2007), R178.
Bioinformatics (27 July 2007)
by Hongfang
Liu, Barry R R
Zeeberg, Qu
Gang, A Gunes G
Koru, Alessandro
Ferrucci, Ari
Kahn, Michael C C
Ryan, Antej
Nuhanovic, Peter J J
Munson, William C C
Reinhold, David W W
Kane, John N N
Weinstein
BMC Bioinformatics, Vol. 8 (02 November 2007), 426.
Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008)
by RJ
Marinelli, K
Montgomery, CL
Liu, NH
Shah, W
Prapong, M
Nitzberg, ZK
Zachariah, GJ
Sherlock, Y
Natkunam, RB
West, M
van de Rijn, PO
Brown, CA
Ball
PLoS ONE, Vol. 2, No. 11. (2007)
PLoS Comput Biol, Vol. 3, No. 10. (26 October 2007), pp. 1842-1844.
Mol Cancer Ther, Vol. 6, No. 5. (1 May 2007), pp. 1483-1491.
by Paul E
Blower, Joseph S
Verducci, Shili
Lin, Jin
Zhou, Ji-Hyun
Chung, Zunyan
Dai, Chang-Gong
Liu, William
Reinhold, Philip L
Lorenzi, Eric P
Kaldjian, Carlo M
Croce, John N
Weinstein, Wolfgang
Sadee
Mol Syst Biol, Vol. 3 (16 October 2007)
Genome Biology, Vol. 8 (11 May 2007), R77.
BMC Bioinformatics, Vol. 8, No. 1. (2007)
BMC Bioinformatics, Vol. 8 (04 August 2007), 285.
J Biomed Inform, Vol. 40, No. 6. (December 2007), pp. 698-706.
BMC Bioinformatics, Vol. 8 (07 March 2007), 80.
Comput Biol Chem, Vol. 31, No. 2. (April 2007), pp. 65-71.
PLoS Genet, Vol. 3, No. 6. (June 2007)
by CY
Lin, VB
Vega, JS
Thomsen, T
Zhang, SL
Kong, M
Xie, KP
Chiu, L
Lipovich, DH
Barnett, F
Stossi, A
Yeo, J
George, VA
Kuznetsov, YK
Lee, TH
Charn, N
Palanisamy, LD
Miller, E
Cheung, BS
Katzenellenbogen, Y
Ruan, G
Bourque, CL
Wei, ET
Liu
Bioinformatics, Vol. 23, No. 10. (15 May 2007), pp. 1225-1234.
PLoS Genetics, Vol. 3, No. 6. (1 June 2007), e96.