iVici: Interrelational Visualization and Correlation Interface.

by: K Tarassov, SW Michnick

Genome Biol, Vol. 6, No. 13. (2005)

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co-expression, software

Abstract

We have developed an application, iVici, to analyze cellular networks represented as addressable symmetric or asymmetric two-dimensional matrices. iVici was designed to permit simultaneous visualization and correlation of multiple datasets, representing any relationship between a set of genes, mRNAs, or proteins. Visual overlay of datasets and addressable access to gene annotations permits comparison of networks of different types (for example protein-protein interactions and genetic networks) or investigation of the dynamic reorganization of a particular network.

@article{citeulike:1033099, abstract = {We have developed an application, iVici, to analyze cellular networks represented as addressable symmetric or asymmetric two-dimensional matrices. iVici was designed to permit simultaneous visualization and correlation of multiple datasets, representing any relationship between a set of genes, mRNAs, or proteins. Visual overlay of datasets and addressable access to gene annotations permits comparison of networks of different types (for example protein-protein interactions and genetic networks) or investigation of the dynamic reorganization of a particular network.}, address = {D\'{e}partement de Biochimie and Centre Robert-Cedergren, Bioinformatiques et Genomiques, Universit\'{e} de Montr\'{e}al, CP 6128, Succursale Centre-ville, Montr\'{e}al, Qu\'{e}bec, H3C 3J7, Canada. kirill.tarassov@umontreal.ca}, author = {Tarassov, K. and Michnick, S. W. }, citeulike-article-id = {1033099}, doi = {10.1186/gb-2005-6-13-r115}, issn = {1465-6914}, journal = {Genome Biol}, keywords = {co-expression, software}, number = {13}, posted-at = {2007-01-10 10:55:40}, priority = {1}, title = {iVici: Interrelational Visualization and Correlation Interface.}, url = {http://dx.doi.org/10.1186/gb-2005-6-13-r115}, volume = {6}, year = {2005} }

RIS record

TY - JOUR ID - citeulike:1033099 L3 - citeulike-article-id:1033099 TI - iVici: Interrelational Visualization and Correlation Interface. JF - Genome Biol VL - 6 IS - 13 AD - Département de Biochimie and Centre Robert-Cedergren, Bioinformatiques et Genomiques, Université de Montréal, CP 6128, Succursale Centre-ville, Montréal, Québec, H3C 3J7, Canada. kirill.tarassov@umontreal.ca SN - 1465-6914 N2 - We have developed an application, iVici, to analyze cellular networks represented as addressable symmetric or asymmetric two-dimensional matrices. iVici was designed to permit simultaneous visualization and correlation of multiple datasets, representing any relationship between a set of genes, mRNAs, or proteins. Visual overlay of datasets and addressable access to gene annotations permits comparison of networks of different types (for example protein-protein interactions and genetic networks) or investigation of the dynamic reorganization of a particular network. KW - co-expression KW - software AU - Tarassov, K AU - Michnick, SW PY - 2005/// UR - http://dx.doi.org/10.1186/gb-2005-6-13-r115 ER -

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