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jasonflannick encode [12 articles]

最近 jasonflannick さんのライブラリに追加された論文の中から タグ encode. You can also see everyone's encode.
  • Identification of higher-order functional domains in the human ENCODE regions
    Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 917-927.
    by Robert E Thurman, Nathan Day, William S Noble, John A Stamatoyannopoulos
    posted to encode by jasonflannick on 2008-07-11 17:17:00 as ** along with 2 people and 1 group ghattem epigenetics Bioinformatics
  • The landscape of histone modifications across 1% of the human genome in five human cell lines
    Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 691-707.
    by Christoph M Koch, Robert M Andrews, Paul Flicek, Shane C Dillon, Ulas Karaoz, Gayle K Clelland, Sarah Wilcox, David M Beare, Joanna C Fowler, Phillippe Couttet, Keith D James, Gregory C Lefebvre, Alexander W Bruce, Oliver M Dovey, Peter D Ellis, Pawandeep Dhami, Cordelia F Langford, Zhiping Weng, Ewan Birney, Nigel P Carter, David Vetrie, Ian Dunham
    posted to encode by jasonflannick on 2008-07-11 17:16:55 as ** along with 7 people and 1 group jyuh djkt olympos ghattem epigenetics maximilianh xingxu Bioinformatics
  • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
    Nature, Vol. 447, No. 7146. (14 June 2007), pp. 799-816.
    posted to encode by jasonflannick on 2008-07-11 17:16:50 as ** along with 24 people and 3 groups pengchy raistrick jyuh cmmorel dpollard ilh djkt plofje ramensky joepickrell massivemayhem fishtank Garamonfok jmuhlich bioyang cabbagezs xingxu antonkratz mimulus_99 julianjonker gjuggler drbal maralena ep161302 Bioinformatics EisenLab SorgerLab
  • Statistical analysis of the genomic distribution and correlation of regulatory elements in the ENCODE regions
    Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 787-797.
    by Zhengdong D Zhang, Alberto Paccanaro, Yutao Fu, Sherman Weissman, Zhiping Weng, Joseph Chang, Michael Snyder, Mark B Gerstein
    posted to encode by jasonflannick on 2008-07-11 17:16:45 as ** along with 7 people and 4 groups ana Borelli kengg ghattem epigenetics blobbybirdman inesdesantiago structural_bioinformatics Bioinformatics Plantandetc UH - Computational Biology
  • Analysis of overrepresented motifs in human core promoters reveals dual regulatory roles of YY1.
    Genome Res, Vol. 17, No. 6. (June 2007), pp. 798-806.
    by H Xi, Y Yu, Y Fu, J Foley, A Halees, Z Weng
    posted to encode by jasonflannick on 2008-07-11 17:16:41 as ** along with 1 person ghattem
  • Integrated analysis of experimental data sets reveals many novel promoters in 1% of the human genome
    Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 720-731.
    by Nathan D Trinklein, Ulas Karaoz, Jiaqian Wu, Anason Halees, Force, Patrick J Collins, Deyou Zheng, Zhengdong D Zhang, Mark B Gerstein, Michael Snyder, Richard M Myers, Zhiping Weng
    posted to encode by jasonflannick on 2008-07-11 17:16:38 as ** along with 5 people jyuh djkt olympos cjeans Garamonfok
  • The DART classification of unannotated transcription within the ENCODE regions: Associating transcription with known and novel loci
    Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 732-745.
    by Joel S Rozowsky, Daniel Newburger, Fred Sayward, Jiaqian Wu, Greg Jordan, Jan O Korbel, Ugrappa Nagalakshmi, Jin Yang, Deyou Zheng, Roderic Guigo, Thomas R Gingeras, Sherman Weissman, Perry Miller, Michael Snyder, Mark B Gerstein
    posted to encode by jasonflannick on 2008-07-11 17:16:32 as ** along with 5 people and 1 group GeeSharpMinor djkt olympos ghattem gjuggler Bioinformatics
  • Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs).
    Genome Res, Vol. 17, No. 6. (June 2007), pp. 828-838.
    by Y Ruan, HS Ooi, SW Choo, KP Chiu, XD Zhao, KG Srinivasan, F Yao, CY Choo, J Liu, P Ariyaratne, WG Bin, VA Kuznetsov, A Shahab, WK Sung, G Bourque, N Palanisamy, CL Wei
    posted to encode by jasonflannick on 2008-07-11 17:16:26 as ** along with 4 people and 3 groups jyuh dchughes ghattem caseybrown Bioinformatics G4ID Genetics-of-Gambling
  • Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome.
    Genome Res (21 November 2006)
    by Olof Emanuelsson, Ugrappa Nagalakshmi, Deyou Zheng, Joel S S Rozowsky, Alexander E E Urban, Jiang Du, Zheng Lian, Viktor Stolc, Sherman Weissman, Michael Snyder, Mark Gerstein
    posted to encode by jasonflannick on 2008-07-11 17:16:15 as ** along with 2 people GeeSharpMinor eckart_bindewald
  • Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions
    Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 746-759.
    by France Denoeud, Philipp Kapranov, Catherine Ucla, Adam Frankish, Robert Castelo, Jorg Drenkow, Julien Lagarde, Tyler Alioto, Caroline Manzano, Jacqueline Chrast, Sujit Dike, Carine Wyss, Charlotte N Henrichsen, Nancy Holroyd, Mark C Dickson, Ruth Taylor, Zahra Hance, Sylvain Foissac, Richard M Myers, Jane Rogers, Tim Hubbard, Jennifer Harrow, Roderic Guigo, Thomas R Gingeras, Stylianos E Antonarakis, Alexandre Reymond
    posted to encode by jasonflannick on 2008-07-11 17:16:09 as ** along with 4 people and 1 group djkt olympos ghattem xingxu Bioinformatics
  • Genome-wide analysis of mammalian promoter architecture and evolution
    Nature Genetics, Vol. 38, No. 6. (28 April 2006), pp. 626-635.
    by Piero Carninci, Albin Sandelin, Boris Lenhard, Shintaro Katayama, Kazuro Shimokawa, Jasmina Ponjavic, Colin AM Semple, Martin S Taylor, Pär G Engström, Martin C Frith, Alistair RR Forrest, Wynand B Alkema, Sin L Tan, Charles Plessy, Rimantas Kodzius, Timothy Ravasi, Takeya Kasukawa, Shiro Fukuda, Mutsumi Kanamori-Katayama, Yayoi Kitazume, Hideya Kawaji, Chikatoshi Kai, Mari Nakamura, Hideaki Konno, Kenji Nakano, Salim Mottagui-Tabar, Peter Arner, Alessandra Chesi, Stefano Gustincich, Francesca Persichetti, Harukazu Suzuki, Sean M Grimmond, Christine A Wells, Valerio Orlando, Claes Wahlestedt, Edison T Liu, Matthias Harbers, Jun Kawai, Vladimir B Bajic, David A Hume, Yoshihide Hayashizaki
    posted to encode by jasonflannick on 2008-07-11 17:16:04 as ** along with 11 people and 4 groups jfr xwbcn dchughes tabu samal nickluscombe xiaobeizhao cisevol eviledv gjuggler antonkratz G4ID EBI-regulation Genetics-of-Gambling cis-regulatory-evolution
  • Transcriptional Maps of 10 Human Chromosomes at 5-Nucleotide Resolution
    Science, Vol. 308, No. 5725. (20 May 2005), pp. 1149-1154.
    by Jill Cheng, Philipp Kapranov, Jorg Drenkow, Sujit Dike, Shane Brubaker, Sandeep Patel, Jeffrey Long, David Stern, Hari Tammana, Gregg Helt, Victor Sementchenko, Antonio Piccolboni, Stefan Bekiranov, Dione K Bailey, Madhavan Ganesh, Srinka Ghosh, Ian Bell, Daniela S Gerhard, Thomas R Gingeras
    posted to encode by jasonflannick on 2008-07-11 17:15:52 as ** along with 5 people GeeSharpMinor karbak tmmurali tuck bertelsen
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