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irenas library [495 articles]

最近 irenas さんのライブラリ .
  • Systems biology: integrating technology, biology, and computation.
    Mechanisms of ageing and development, Vol. 124, No. 1. (January 2003), pp. 9-16.
    by L Hood
    posted to new sysbio by irenas on 2008-04-14 14:41:30 as **
  • CYGD: the Comprehensive Yeast Genome Database.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by U Güldener, M Münsterkötter, G Kastenmüller, N Strack, J van Helden, C Lemer, J Richelles, SJ Wodak, J García-Martínez, JE Pérez-Ortín, H Michael, A Kaps, E Talla, B Dujon, B André, JL Souciet, J De Montigny, E Bon, C Gaillardin, HW Mewes
    posted to db new by irenas on 2008-04-14 14:20:38 as ** along with 2 people chad_davis iris_2001
  • ChEBI: a database and ontology for chemical entities of biological interest.
    Nucleic Acids Res (11 October 2007)
    by Kirill Degtyarenko, Paula de D Matos, Marcus Ennis, Janna Hastings, Martin Zbinden, Alan McNaught, Rafael Alcántara, Michael Darsow, Mickaël Guedj, Michael Ashburner
    posted to db new by irenas on 2008-04-14 14:16:30 as ** along with 2 people massivemayhem dullhunk
  • Database resources of the National Center for Biotechnology Information.
    Nucleic Acids Res (27 November 2007)
    by David L L Wheeler, Tanya Barrett, Dennis A A Benson, Stephen H H Bryant, Kathi Canese, Vyacheslav Chetvernin, Deanna M M Church, Michael Dicuccio, Ron Edgar, Scott Federhen, Michael Feolo, Lewis Y Y Geer, Wolfgang Helmberg, Yuri Kapustin, Oleg Khovayko, David Landsman, David J J Lipman, Thomas L L Madden, Donna R R Maglott, Vadim Miller, James Ostell, Kim D D Pruitt, Gregory D D Schuler, Martin Shumway, Edwin Sequeira, Steven T T Sherry, Karl Sirotkin, Alexandre Souvorov, Grigory Starchenko, Roman L L Tatusov, Tatiana A A Tatusova, Lukas Wagner, Eugene Yaschenko
    posted to db new by irenas on 2008-04-14 14:06:00 as ** along with 4 people jyuh dullhunk hpiwowar sci91078
  • Model storage, exchange and integration
    BMC Neuroscience, Vol. 7, No. Suppl 1. (2006)
    by Nicolas Le Novere
    posted to new sysbio by irenas on 2008-04-14 11:19:44 as ** along with 1 person and 2 groups dagmar dIEMoSIRIS compneur
  • KEGG for linking genomes to life and the environment
    Nucl. Acids Res. (12 December 2007), gkm882.
    by Minoru Kanehisa, Michihiro Araki, Susumu Goto, Masahiro Hattori, Mika Hirakawa, Masumi Itoh, Toshiaki Katayama, Shuichi Kawashima, Shujiro Okuda, Toshiaki Tokimatsu, Yoshihiro Yamanishi
    posted to db new by irenas on 2008-04-14 11:08:57 as ** along with 6 people massivemayhem jyuh raiyar barriot renatomilani shung
  • Automated extraction of information on protein-protein interactions from the biological literature.
    Bioinformatics, Vol. 17, No. 2. (February 2001), pp. 155-161.
    by T Ono, H Hishigaki, A Tanigami, T Takagi
    posted to ie new by irenas on 2008-04-14 11:01:26 as ** along with 6 people and 3 groups yggdrasil yas blackbart helliontroy zlu bundschu T_lab biomedical-nlp generif_paper
  • Information extraction technologies for the life science industry
    Drug Discovery Today: Technologies, Vol. 2, No. 3. ( 2005), pp. 217-224.
    by Juliane Fluck, Marc Zimmermann, Günther Kurapkat, Martin Hofmann
    posted to ie new by irenas on 2008-04-14 10:50:03 as **
  • High-Throughput Identification of Chemistry in Life Science Texts
    Computational Life Sciences II (2006), pp. 107-118.
    by Peter Corbett, Peter Murray-Rust
    posted to ner new by irenas on 2008-04-11 17:17:01 as ** along with 1 person kemo
  • A critical assessment of text mining methods in molecular biology. Proceedings of a workshop. March 28-31, 2004. Granada, Spain.
    BMC bioinformatics, Vol. 6 Suppl 1 (2005)
    by Christian Blaschke, Lynette Hirschman, Alfonso Valencia, Alexander Yeh
    posted to ner by irenas on 2008-04-11 17:04:03 as **
  • What makes a gene name? Named entity recognition in the biomedical literature.
    Brief Bioinform, Vol. 6, No. 4. (December 2005), pp. 357-369.
    by U Leser, J Hakenberg
    posted to ner new by irenas on 2008-04-11 16:49:54 as ** along with 1 person miguel
  • Data capture in bioinformatics: requirements and experiences with Pedro
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Daniel Jameson, Kevin Garwood, Chris Garwood, Tim Booth, Pinar Alper, Stephen Oliver, Norman Paton
    posted to new by irenas on 2008-04-11 16:28:56 as ** along with 2 people jyuh dullhunk
  • Automatic pathway building in biological association networks.
    BMC bioinformatics, Vol. 7 (2006)
    by A Yuryev, Z Mulyukov, E Kotelnikova, S Maslov, S Egorov, A Nikitin, N Daraselia, I Mazo
    posted to new sysbio by irenas on 2008-04-10 17:59:16 as **
  • Integration of enzyme kinetic data from various sources.
    In silico biology, Vol. 7, No. 2 Suppl. (2007)
    by S Borger, J Uhlendorf, A Helbig, W Liebermeister
    posted to new sysbio by irenas on 2008-04-10 13:12:21 as **
  • The KEGG resource for deciphering the genome.
    Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004)
    by M Kanehisa, S Goto, S Kawashima, Y Okuno, M Hattori
    posted to db new by irenas on 2008-04-10 12:59:47 as ** along with 8 people and 1 group BragilMassoud lfriedl nuke2005 alexg bioinfo wnpx Garamonfok shung kdl
  • Two applications of information extraction to biological science journal articles: enzyme interactions and protein structures.
    Pac Symp Biocomput (2000), pp. 505-516.
    by K Humphreys, G Demetriou, R Gaizauskas
    posted to ie kipar by irenas on 2008-04-10 11:43:08 as ** along with 1 person and 1 group caporaso biomedical-nlp
  • Systems biology, metabolic modelling and metabolomics in drug discovery and development
    Drug Discovery Today, Vol. 11, No. 23-24. (December 2006), pp. 1085-1092.
    by Douglas B Kell
    posted to new sysbio by irenas on 2008-04-10 11:20:01 as ** along with 8 people and 2 groups alanrw shikin nicklynch alexg dullhunk mhucka raiyar fishtank GeneGo steinmetzlab
  • Resources for integrative systems biology: from data through databases to networks and dynamic system models.
    Brief Bioinform, Vol. 7, No. 4. (December 2006), pp. 318-330.
    by A Ng, B Bursteinas, Q Gao, E Mollison, M Zvelebil
    posted to new sysbio by irenas on 2008-04-10 11:19:31 as ** along with 3 people jfr balajis cjeans
  • Resources, standards and tools for systems biology
    Brief Funct Genomic Proteomic (17 October 2007), elm027.
    by Christoph Wierling, Ralf Herwig, Hans Lehrach
    posted to new sysbio by irenas on 2008-04-10 11:17:20 as ** along with 1 person jyuh
  • Identification of biological relationships from text documents using efficient computational methods.
    J Bioinform Comput Biol, Vol. 1, No. 2. (July 2003), pp. 307-342.
    by M Palakal, M Stephens, S Mukhopadhyay, R Raje, S Rhodes
    posted to ie new by irenas on 2008-04-10 11:08:47 as ** along with 1 person sophia
  • Hemoglobin affinity for 2,3-bisphosphoglycerate in solutions and intact erythrocytes: studies using pulsed-field gradient nuclear magnetic resonance and Monte Carlo simulations.
    Biophys J, Vol. 67, No. 5. (November 1994), pp. 2096-2109.
    by AJ Lennon, NR Scott, BE Chapman, PW Kuchel
    posted to nmr by irenas on 2007-09-24 11:38:13 as **
  • Automated microflow NMR: routine analysis of five-microliter samples.
    Anal Chem, Vol. 77, No. 19. (1 October 2005), pp. 6509-6515.
    by A Jansma, T Chuan, RW Albrecht, DL Olson, TL Peck, BH Geierstanger
    posted to nmr by irenas on 2007-09-24 11:37:31 as **
  • Magnetic resonance imaging, microscopy, and spectroscopy of the central nervous system in experimental animals.
    NeuroRx, Vol. 2, No. 2. (April 2005), pp. 250-264.
    by I Pirko, ST Fricke, AJ Johnson, M Rodriguez, SI Macura
    posted to nmr by irenas on 2007-09-24 11:37:02 as **
  • Modern Information Retrieval
    (15 May 1999)
    by Ricardo Baeza-Yates, Berthier Ribeiro-Neto
    posted to owg by irenas on 2007-08-14 15:27:40 as ** along with 37 people and 5 groups ctl ssn pdlug creswick thsant mapio fridaynet relves ChaTo carolh12 leidner jschellhase pajoma blackrussian tolosoft arjen mthomure dullhunk caomo ak pool007 taho mheckner kah hansom goto4711 gunv rayzhang diogomartins aosbat imrchen bm58 pprett paulovn abellogin mircea Carol_Perryman dbk-lab video_retrieval CHISEL AI musil
  • Spotting and Discovering Terms through Natural Language Processing
    Nat. Lang. Eng., Vol. 10, No. 2. (June 2001), pp. 195-196.
    by Christian Jacquemin
    posted to owg by irenas on 2007-08-14 15:25:08 as ** along with 1 group dbk-lab
  • Workflows for e-Science: Scientific Workflows for Grids
    (18 December 2006)
    by Ian J Taylor, Ewa Deelman, Dennis B Gannon
    posted to owg by irenas on 2007-08-14 15:23:52 as ** along with 2 people and 1 group moborg dullhunk dbk-lab
  • Metabolomics: Current analytical platforms and methodologies
    TrAC Trends in Analytical Chemistry, Vol. 24, No. 4. (April 2005), pp. 285-294.
    by Warwick B Dunn, David Ellis
    posted to owg by irenas on 2007-08-14 15:20:22 as ** along with 1 person and 1 group LeightonP dbk-lab
  • The work of the Human Proteome Organisation's Proteomics Standards Initiative (HUPO PSI).
    OMICS, Vol. 10, No. 2. (2006), pp. 145-151.
    by CF Taylor, H Hermjakob, RK Julian, JS Garavelli, R Aebersold, R Apweiler
    posted to owg by irenas on 2007-08-14 15:17:06 as ** along with 1 group dbk-lab
  • Ontology-based knowledge representation for bioinformatics
    Brief Bioinform, Vol. 1, No. 4. (1 January 2000), pp. 398-414.
    by Robert Stevens, Carole A Goble, Sean Bechhofer
    posted to owg by irenas on 2007-08-14 15:15:07 as ** along with 2 people and 1 group PunkRock gmonce dbk-lab
  • From concepts to clinical reality: an essay on the benchmarking of biomedical terminologies.
    J Biomed Inform, Vol. 39, No. 3. (June 2006), pp. 288-298.
    by B Smith
    posted to owg by irenas on 2007-08-14 15:13:29 as ** along with 1 group dbk-lab
  • Ontologies for molecular biology and bioinformatics.
    In Silico Biol, Vol. 2, No. 3. (2002), pp. 179-193.
    by S Schulze-Kremer
    posted to owg by irenas on 2007-08-14 15:12:41 as ** along with 1 person and 1 group moborg dbk-lab
  • Metabolomics technology and bioinformatics.
    Brief Bioinform, Vol. 7, No. 2. (June 2006), pp. 128-139.
    by V Shulaev
    posted to owg by irenas on 2007-08-14 15:11:16 as ** along with 1 person and 1 group jyuh dbk-lab
  • National Center for Biomedical Ontology: advancing biomedicine through structured organization of scientific knowledge.
    OMICS, Vol. 10, No. 2. (2006), pp. 185-198.
    by DL Rubin, SE Lewis, CJ Mungall, S Misra, M Westerfield, M Ashburner, I Sim, CG Chute, H Solbrig, MA Storey, B Smith, J Day-Richter, NF Noy, MA Musen
    posted to owg by irenas on 2007-08-14 15:10:39 as ** along with 5 people and 3 groups yas balajis dullhunk RockHI sobolevnrm dbk-lab T_lab baker-group
  • Methods of automatic term recognition: a review
    Terminology, Vol. 3, No. 2. (1996), pp. 259-289.
    by Kyo Kageura, Bin Umino
    posted to owg by irenas on 2007-08-14 15:04:09 as ** along with 4 people and 1 group johnkork florianleitner jhs2zz ZiqiZhang dbk-lab
  • Creating knowledge repositories from biomedical reports: the MEDSYNDIKATE text mining system.
    Pac Symp Biocomput (2002), pp. 338-349.
    by U Hahn, M Romacker, S Schulz
    posted to owg by irenas on 2007-08-14 15:02:55 as ** along with 1 person and 2 groups yas dbk-lab T_lab
  • A special issue on data standards.
    OMICS, Vol. 10, No. 2. (2006), pp. 84-93.
    by D Field, SA Sansone
    posted to owg by irenas on 2007-08-14 14:59:29 as ** along with 1 group dbk-lab
  • The practical impact of ontologies on biomedical informatics.
    Methods Inf Med, Vol. 45 Suppl 1 (2006), pp. 124-135.
    by JJ Cimino, X Zhu
    posted to owg by irenas on 2007-08-14 14:57:34 as ** along with 2 people and 2 groups josepe kkaiser dbk-lab IEG
  • Metabolomics Standards Workshop and the development of international standards for reporting metabolomics experimental results.
    Brief Bioinform, Vol. 7, No. 2. (June 2006), pp. 159-165.
    by AL Castle, O Fiehn, R Kaddurah-Daouk, JC Lindon
    posted to owg by irenas on 2007-08-14 14:54:23 as ** along with 1 person and 1 group BIBLIOma dbk-lab
  • Bio-ontologies: current trends and future directions
    Brief Bioinform, Vol. 7, No. 3. (September 2006), pp. 256-274.
    by O Bodenreider, R Stevens
    posted to owg by irenas on 2007-08-14 14:51:02 as ** along with 1 group dbk-lab
  • Bio-ontologies-fast and furious.
    Nat Biotechnol, Vol. 22, No. 6. (June 2004), pp. 773-774.
    by J Blake
    posted to owg by irenas on 2007-08-14 14:45:04 as ** along with 1 group dbk-lab
  • SLIM: an alternative Web interface for MEDLINE/PubMed searches - a preliminary study.
    BMC Med Inform Decis Mak, Vol. 5 (2005)
    by M Muin, P Fontelo, F Liu, M Ackerman
    posted to new by irenas on 2007-07-18 14:51:14 as *** along with 2 people and 1 group mgregg kahumbu dbk-lab
  • Meta-All: a system for managing metabolic pathway information
    BMC Bioinformatics, Vol. 7 (23 October 2006), 465.
    by Stephan Weise, Ivo Grosse, Christian Klukas, Dirk Koschuetzki, Uwe Scholz, Falk Schreiber, Bjoern H Junker
    posted to new sysbio by irenas on 2007-05-03 13:02:16 as **** along with 1 group dbk-lab
  • Formal ontology for natural language processing and the integration of biomedical databases.
    Int J Med Inform, Vol. 75, No. 3-4. (r 2006), pp. 224-231.
    by J Simon, M Dos Santos, J Fielding, B Smith
    posted to new by irenas on 2007-01-30 18:08:55 as **** along with 1 person and 2 groups kkaiser dbk-lab IEG
  • Generating hypotheses by discovering implicit associations in the literature: a case report of a search for new potential therapeutic uses for thalidomide.
    J Am Med Inform Assoc, Vol. 10, No. 3. (n 2003), pp. 252-259.
    by M Weeber, R Vos, H Klein, LT De Jong-Van Den Berg, AR Aronson, G Molema
    posted to new by irenas on 2006-11-22 17:12:13 as ** along with 3 people and 3 groups yas fisherp JeffreyDemaine dbk-lab T_lab CISTI-Research
  • Automatic extraction of gene/protein biological functions from biomedical text
    Bioinformatics, Vol. 21, No. 7. (01 April 2005), pp. 1227-1236.
    by Koike Asako, Niwa Yoshiki, Takagi Toshihisa
    posted to new by irenas on 2006-11-22 16:20:50 as ** along with 3 people and 2 groups yas helliontroy gaudan dbk-lab biomedical-nlp
  • An architecture for biological information extraction and representation
    Bioinformatics, Vol. 21, No. 4. (15 February 2005), pp. 430-438.
    by Aditya Vailaya, Peter Bluvas, Robert Kincaid, Allan Kuchinsky, Michael Creech, Annette Adler
    posted to new by irenas on 2006-11-22 16:20:24 as ** along with 5 people and 1 group eweaver kt t11 kemo thomaskelder dbk-lab
  • Expert knowledge without the expert: integrated analysis of gene expression and literature to derive active functional contexts.
    Bioinformatics, Vol. 21 Suppl 2 (1 September 2005)
    by R Küffner, K Fundel, R Zimmer
    posted to new by irenas on 2006-11-22 15:52:50 as ** along with 5 people and 2 groups chad_davis yas fisherp incovoma vlachmore dbk-lab T_lab
  • Analysis of genomic and proteomic data using advanced literature mining.
    J Proteome Res, Vol. 2, No. 4. (g 2003), pp. 405-412.
    by Y Hu, LM Hines, H Weng, D Zuo, M Rivera, A Richardson, J LaBaer
    posted to new by irenas on 2006-11-22 15:52:21 as ** along with 1 person and 2 groups yas dbk-lab T_lab
  • Conceptual biology, hypothesis discovery, and text mining: Swanson's legacy
    Biomedical Digital Libraries, Vol. 3, No. 1. (03 April 2006), 2.
    by Tanja Bekhuis
    posted to new by irenas on 2006-11-22 15:51:25 as ** along with 3 people and 3 groups Enro yas JeffreyDemaine dbk-lab T_lab CISTI-Research
  • An online literature mining tool for protein phosphorylation.
    Bioinformatics (27 April 2006)
    by X Yuan, Z Z Z Hu, H T T Wu, M Torii, M Narayanaswamy, K E E Ravikumar, K Vijay-Shanker, C H H Wu
    posted to new by irenas on 2006-11-22 15:50:50 as ** along with 2 people and 2 groups yas neils dbk-lab T_lab
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