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inesdesantiago library [111 articles]

最近 inesdesantiago さんのライブラリ (優先度順).
  • GeneTrack--a genomic data processing and visualization framework
    Bioinformatics, Vol. 24, No. 10. (15 May 2008), pp. 1305-1306.
    by Istvan Albert, Shinichiro Wachi, Cizhong Jiang, Franklin B Pugh
    posted to software by inesdesantiago on 2008-07-24 16:58:19 as ***** along with 2 people jyuh wisdom_love
  • Stem cell transcriptome profiling via massive-scale mRNA sequencing.
    Nature methods (30 May 2008)
    by Nicole Cloonan, Alistair R R R Forrest, Gabriel Kolle, Brooke B A B Gardiner, Geoffrey J J Faulkner, Mellissa K K Brown, Darrin F F Taylor, Anita L L Steptoe, Shivangi Wani, Graeme Bethel, Alan J J Robertson, Andrew C C Perkins, Stephen J J Bruce, Clarence C C Lee, Swati S S Ranade, Heather E E Peckham, Jonathan M M Manning, Kevin J J McKernan, Sean M M Grimmond
    posted to proteome by inesdesantiago on 2008-07-24 16:55:58 as ***** along with 4 people myourshaw caseybrown GeeSharpMinor megraw
  • Molecular profiling of stem cells.
    Clinica chimica acta; international journal of clinical chemistry, Vol. 378, No. 1-2. (March 2007), pp. 24-32.
    by L Ma, B Sun, L Hood, Q Tian
    posted to transcription review proteome by inesdesantiago on 2008-07-24 16:29:27 as *****
  • Multivariate proteomic analysis of murine embryonic stem cell self-renewal versus differentiation signaling
    Proceedings of the National Academy of Sciences, Vol. 101, No. 9. (2 March 2004), pp. 2900-2905.
    by Wendy Prudhomme, George Q Daley, Peter Zandstra, Douglas A Lauffenburger
    posted to proteome integration by inesdesantiago on 2008-07-24 16:26:30 as ***** along with 1 person faisalm
  • Integrated Genomic and Proteomic Analyses of Gene Expression in Mammalian Cells
    Mol Cell Proteomics, Vol. 3, No. 10. (1 October 2004), pp. 960-969.
    by Qiang Tian, Serguei B Stepaniants, Mao Mao, Lee Weng, Megan C Feetham, Michelle J Doyle, Eugene C Yi, Hongyue Dai, Vesteinn Thorsson, Jimmy Eng, David Goodlett, Joel P Berger, Bert Gunter, Peter S Linseley, Roland B Stoughton, Ruedi Aebersold, Steven J Collins, William A Hanlon, Leroy E Hood
    posted to proteome integration by inesdesantiago on 2008-07-24 16:17:33 as *****
  • Chromatin in pluripotent embryonic stem cells and differentiation
    Nature Reviews Molecular Cell Biology, Vol. 7, No. 7. (17 May 2006), pp. 540-546.
    by Eran Meshorer, Tom Misteli
    posted to transcription spatial-organization review modifications by inesdesantiago on 2008-07-24 16:13:02 as *****
  • Oct4 Targets Regulatory Nodes to Modulate Stem Cell Function
    PLoS ONE, Vol. 2, No. 6. (20 June 2007), e553.
    by Pearl A Campbell, Carolina Perez-Iratxeta, Miguel A Andrade-Navarro, Michael A Rudnicki
    posted to transcription by inesdesantiago on 2008-07-24 15:59:25 as ***** along with 1 person MllePapillon
  • Isochores Merit the Prefix 'Iso'
    Genome Biology, Vol. 3, No. 11. (2002), pp. preprint0009.1-preprint0009.15.
    by Wentian Li, Pedro B Galvan, Pedro Carpena, Jose Oliver
    posted to isochores by inesdesantiago on 2008-07-24 15:50:02 as *****
  • A Short Genome Primer
    Comparative Genomics (5 June 2005), pp. 5-11.
    by Cmels Directorate
    edited by Lawrence
    posted to genome-organization by inesdesantiago on 2008-07-24 15:44:03 as *****
  • Replication-timing-correlated spatial chromatin arrangements in cancer and in primate interphase nuclei
    J Cell Sci, Vol. 121, No. 11. (1 June 2008), pp. 1876-1886.
    by Florian Grasser, Michaela Neusser, Heike Fiegler, Tobias Thormeyer, Marion Cremer, Nigel P Carter, Thomas Cremer, Stefan Muller
    posted to spatial-organization replication by inesdesantiago on 2008-07-24 15:03:39 as *****
  • Dissecting the logical types of network control in gene expression profiles.
    BMC systems biology, Vol. 2 (2008)
    by C Marr, M Geertz, MT Hütt, G Muskhelishvili
    posted to genome-organization by inesdesantiago on 2008-07-24 15:01:20 as *****
  • The three-dimensional structure of human interphase chromosomes is related to the transcriptome map.
    Molecular and cellular biology, Vol. 27, No. 12. (June 2007), pp. 4475-4487.
    by S Goetze, J Mateos-Langerak, HJ Gierman, W de Leeuw, O Giromus, MH Indemans, J Koster, V Ondrej, R Versteeg, R van Driel
    posted to spatial-organization by inesdesantiago on 2008-07-24 14:54:20 as *****
  • Genome-scale DNA methylation maps of pluripotent and differentiated cells
    Nature (06 July 2008)
    by Alexander Meissner, Tarjei S Mikkelsen, Hongcang Gu, Marius Wernig, Jacob Hanna, Andrey Sivachenko, Xiaolan Zhang, Bradley E Bernstein, Chad Nusbaum, David B Jaffe, Andreas Gnirke, Rudolf Jaenisch, Eric S Lander
    posted to wide_mapping methylation by inesdesantiago on 2008-07-24 14:43:51 as ***** along with 1 person jasonflannick
  • A chromatin landmark and transcription initiation at most promoters in human cells.
    Cell, Vol. 130, No. 1. (13 July 2007), pp. 77-88.
    by MG Guenther, SS Levine, LA Boyer, R Jaenisch, RA Young
    posted to polymerase wide_mapping modifications by inesdesantiago on 2008-07-24 14:35:27 as ***** along with 1 person margaritis
  • Gene dynamics and nuclear architecture during differentiation
    Differentiation, Vol. 76, No. 1. (January 2008), pp. 41-56.
    by Schofer, Christian, Weipoltshammer, Klara
    posted to spatial-organization review by inesdesantiago on 2008-07-24 14:33:07 as *****
  • The complexity of the mammalian transcriptome
    The Journal of Physiology, Vol. 575, No. 2. (September 2006), pp. 321-332.
    by Gustincich, Stefano, Sandelin, Albin, Plessy, Charles, Katayama, Shintaro, Simone, Roberto, Lazarevic, Dejan, Hayashizaki, Yoshihide, Carninci, Piero
    posted to transcription review by inesdesantiago on 2008-07-24 14:28:32 as *****
  • Gene activation and deactivation related changes in the three-dimensional structure of chromatin.
    Chromosoma, Vol. 114, No. 5. (November 2005), pp. 331-337.
    by E Wegel, P Shaw
    posted to spatial-organization review by inesdesantiago on 2008-07-24 14:25:15 as ***** along with 1 person and 3 groups PeterDAdamo Boydian_Society Nutritional_Polymorphisms The_Individualist
  • Dynamics and interplay of nuclear architecture, genome organization, and gene expression.
    Genes Dev, Vol. 21, No. 23. (1 December 2007), pp. 3027-3043.
    by R Schneider, R Grosschedl
    posted to spatial-organization review genome-organization by inesdesantiago on 2008-07-24 14:23:27 as ***** along with 2 people sebastien_vigneau aswin
  • Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions
    Nat Rev Genet, Vol. 8, No. 2. (February 2007), pp. 104-115.
    by Christian Lanctot, Thierry Cheutin, Marion Cremer, Giacomo Cavalli, Thomas Cremer
    posted to spatial-organization review by inesdesantiago on 2008-07-24 14:20:13 as ***** along with 7 people and 3 groups echinotrix dchughes emilyhare margaritis tenpils massivemayhem mdimon EisenLab G4ID Genetics-of-Gambling
  • Radial chromatin positioning is shaped by local gene density, not by gene expression.
    Chromosoma, Vol. 116, No. 3. (June 2007), pp. 285-306.
    by K Küpper, A Kölbl, D Biener, S Dittrich, J von Hase, T Thormeyer, H Fiegler, NP Carter, MR Speicher, T Cremer, M Cremer
    posted to spatial-organization by inesdesantiago on 2008-07-24 14:08:13 as *****
  • Domain-wide regulation of gene expression in the human genome
    Genome Res., Vol. 17, No. 9. (1 September 2007), pp. 1286-1295.
    by Hinco J Gierman, Mireille H Indemans, Jan Koster, Sandra Goetze, Jurgen Seppen, Dirk Geerts, Roel van Driel, Rogier Versteeg
    posted to genome-organization by inesdesantiago on 2008-07-24 14:05:06 as ***** along with 5 people and 2 groups dchughes djkt cjeans cabbagezs ljs G4ID Genetics-of-Gambling
  • Spatial genome organization in the formation of chromosomal translocations.
    Seminars in cancer biology, Vol. 17, No. 1. (February 2007), pp. 80-90.
    by KJ Meaburn, T Misteli, E Soutoglou
    posted to spatial-organization review by inesdesantiago on 2008-07-24 13:44:22 as *****
  • Spatial organization of the eukaryotic genome and the action of epigenetic mechanisms
    Russian Journal of Genetics, Vol. 42, No. 12. (December 2006), pp. 1353-1361.
    by Razin,
    posted to spatial-organization review by inesdesantiago on 2008-07-24 13:40:30 as *****
  • Developmentally-poised chromatin of embryonic stem cells.
    Frontiers in bioscience : a journal and virtual library, Vol. 13 (2008), pp. 1568-1577.
    by TP Rasmussen
    posted to review reprogramming modifications by inesdesantiago on 2008-07-24 13:38:18 as *****
  • Genome-wide mapping and analysis of active promoters in mouse embryonic stem cells and adult organs
    Genome Res. (27 November 2007), gr.6654808.
    by Leah O Barrera, Zirong Li, Andrew D Smith, Karen C Arden, Webster K Cavenee, Michael Q Zhang, Roland D Green, Bing Ren
    posted to polymerase wide_mapping modifications by inesdesantiago on 2008-07-24 13:34:51 as ***** along with 2 people gracio sameetmehta
  • Identifying functional neighborhoods within the cell nucleus: Proximity analysis of early S-phase replicating chromatin domains to sites of transcription, RNA polymerase II, HP1gamma, matrin 3 and SAF-A.
    Journal of cellular biochemistry (10 July 2008)
    by Kishore S S Malyavantham, Sambit Bhattacharya, Marcos Barbeitos, Lopamudra Mukherjee, Jinhui Xu, Frank O O Fackelmayer, Ronald Berezney
    posted to spatial-organization replication by inesdesantiago on 2008-07-23 19:15:21 as *****
  • Global mRNA changes in microarray experiments
    Nature Biotechnology, Vol. 26, No. 7., pp. 741-742.
    by Matthew A Hannah, Henning Redestig, Andrea Leisse, Lothar Willmitzer
    posted to review microarray by inesdesantiago on 2008-07-23 19:08:33 as ***** along with 1 person GeeSharpMinor
  • Combinatorial patterns of histone acetylations and methylations in the human genome
    Nat Genet, Vol. 40, No. 7. (July 2008), pp. 897-903.
    by Zhibin Wang, Chongzhi Zang, Jeffrey A Rosenfeld, Dustin E Schones, Artem Barski, Suresh Cuddapah, Kairong Cui, Tae-Young Roh, Weiqun Peng, Michael Q Zhang, Keji Zhao
    posted to integration by inesdesantiago on 2008-07-23 18:43:11 as ***** along with 5 people bpcusack caseybrown kengg djkt kambiz
  • Dissecting direct reprogramming through integrative genomic analysis
    Nature (28 May 2008)
    by Tarjei S Mikkelsen, Jacob Hanna, Xiaolan Zhang, Manching Ku, Marius Wernig, Patrick Schorderet, Bradley E Bernstein, Rudolf Jaenisch, Eric S Lander, Alexander Meissner
    posted to reprogramming integration by inesdesantiago on 2008-07-23 18:34:17 as ***** along with 3 people jasonflannick zwang djkt
  • Biogenesis of mRNPs: integrating different processes in the eukaryotic nucleus.
    Chromosoma, Vol. 117, No. 4. (August 2008), pp. 319-331.
    by R Luna, H Gaillard, C González-Aguilera, A Aguilera
    posted to transcription review by inesdesantiago on 2008-07-23 16:27:58 as *****
  • Keeping pace with the data: 2008 update on the Bioinformatics Links Directory.
    Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008)
    by MD Brazas, JA Fox, T Brown, S McMillan, BF Ouellette
    posted to software review by inesdesantiago on 2008-07-23 14:41:19 as ***** along with 2 people jyuh nuin
  • OREST: the online resource for EST analysis.
    Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008)
    by B Waegele, T Schmidt, HW Mewes, A Ruepp
    posted to software by inesdesantiago on 2008-07-23 14:40:41 as *****
  • Global Mapping of DNA Methylation in Mouse Promoters Reveals Epigenetic Reprogramming of Pluripotency Genes
    PLoS Genet, Vol. 4, No. 6. (27 June 2008), e1000116.
    by Cassandra R Farthing, Gabriella Ficz, Ray K Ng, Chun-Fung Chan, Simon Andrews, Wendy Dean, Myriam Hemberger, Wolf Reik
    posted to wide_mapping methylation by inesdesantiago on 2008-07-23 14:07:30 as ***** along with 2 people djkt Schmidtc
  • notes Genome-wide transcription and the implications for genomic organization.
    Nat Rev Genet (8 May 2007)
    by Philipp Kapranov, Aarron T T Willingham, Thomas R R Gingeras
    posted to transcription review by inesdesantiago on 2008-01-19 18:00:37 as ***** along with 15 people and 5 groups GeeSharpMinor Ema maximilianh jyuh balicea xico dchughes kengg sebastien_vigneau zwang ajgentles asddd hanansh antonkratz vietanh0 Bioinformatics WetBiology G4ID Plantandetc Genetics-of-Gambling
  • notes Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.
    Nat Genet (4 February 2007)
    by Nathaniel D D Heintzman, Rhona K K Stuart, Gary Hon, Yutao Fu, Christina W W Ching, R David D Hawkins, Leah O O Barrera, Sara Van Calcar, Chunxu Qu, Keith A A Ching, Wei Wang, Zhiping Weng, Roland D D Green, Gregory E E Crawford, Bing Ren
    posted to prediction by inesdesantiago on 2008-01-19 16:07:49 as ***** along with 7 people and 2 groups kengg djkt mgaldzic olympos skoch3 epigenetics caseybrown CHIP Plantandetc
  • notes High-resolution profiling of histone methylations in the human genome.
    Cell, Vol. 129, No. 4. (18 May 2007), pp. 823-837.
    by A Barski, S Cuddapah, K Cui, TY Roh, DE Schones, Z Wang, G Wei, I Chepelev, K Zhao
    posted to wide_mapping modifications by inesdesantiago on 2008-01-18 18:33:43 as ***** along with 7 people and 1 group jyuh kengg sebastien_vigneau jackjackjjj ghattem epigenetics ksha Plantandetc
  • notes Gene regulation and large-scale chromatin organization in the nucleus
    Chromosome Research, Vol. 14, No. 1. (February 2006), pp. 117-126.
    by Niall Dillon
    posted to transcription spatial-organization review by inesdesantiago on 2008-01-18 15:15:01 as *****
  • Transcriptional control of noise in gene expression
    Proceedings of the National Academy of Sciences (19 March 2008), 0707904105.
    by Alvaro Sanchez, Jane Kondev
    posted to transcription by inesdesantiago on 2008-07-24 17:09:31 as **** along with 7 people austin sbottani ddcttrl jjray balabu margaritis lambda
  • Stem cell self-renewal versus differentiation: Tumor suppressor Mei-P26 and miRNAs control the balance
    Cell Res, Vol. 18, No. 7. (0000), pp. 713-715.
    by Run Shen, Ting Xie
    posted to rna review by inesdesantiago on 2008-07-24 14:57:25 as ****
  • Integration of External Signaling Pathways with the Core Transcriptional Network in Embryonic Stem Cells
    Cell, Vol. 133, No. 6. (13 June 2008), pp. 1106-1117.
    by Xi Chen, Han Xu, Ping Yuan, Fang Fang, Mikael Huss, Vinsensius B Vega, Eleanor Wong, Yuriy L Orlov, Weiwei Zhang, Jianming Jiang, Yuin-Han Loh, Hock C Yeo, Zhen X Yeo, Vipin Narang, Kunde R Govindarajan, Bernard Leong, Atif Shahab, Yijun Ruan, Guillaume Bourque, Wing-Kin Sung, Neil D Clarke, Chia-Lin Wei, Huck-Hui Ng
    posted to wide_mapping transcription by inesdesantiago on 2008-07-24 14:52:36 as **** along with 3 people kengg caseybrown jjray
  • Action at a distance: epigenetic silencing of large chromosomal regions in carcinogenesis.
    Human molecular genetics, Vol. 16 Spec No 1 (15 April 2007)
    by SJ Clark
    posted to spatial-organization review by inesdesantiago on 2008-07-24 14:15:36 as ****
  • Evolutionary Origin and Maintenance of Coexpressed Gene Clusters in Mammals
    Mol Biol Evol, Vol. 23, No. 9. (1 September 2006), pp. 1715-1723.
    by Marie Semon, Laurent Duret
    posted to genome-organization by inesdesantiago on 2008-07-24 14:00:32 as **** along with 3 people and 2 groups dchughes JeffR100 Garamonfok G4ID Genetics-of-Gambling
  • Early replication and the apoptotic pathway.
    J Cell Physiol, Vol. 213, No. 2. (November 2007), pp. 434-439.
    by SM Cohen, M Cordeiro-Stone, DG Kaufman
    posted to review replication by inesdesantiago on 2008-07-24 13:30:50 as **** along with 1 person jyuh
  • Gene Regulation in the Third Dimension
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1793-1794.
    by Job Dekker
    posted to spatial-organization review by inesdesantiago on 2008-07-24 13:27:59 as **** along with 10 people and 2 groups ArtemPankin emptyhb operon AbnerCYH ealloza biomcgary sunhwan dlobo lambda Haze Khavkin's lab GEB
  • Whole-genome views of chromatin structure
    Chromosome Research, Vol. 13, No. 3. (January 2005), pp. 289-298.
    by Martin Loden, Bas Steensel
    posted to spatial-organization review by inesdesantiago on 2008-07-24 13:22:16 as ****
  • Genomic views of chromatin
    Current Opinion in Genetics & Development, Vol. 15, No. 5. (October 2005), pp. 476-481.
    by Dana J Huebert, Bradley E Bernstein
    posted to spatial-organization review modifications by inesdesantiago on 2008-07-24 13:21:59 as **** along with 2 people jasonflannick textoris
  • An Extended Transcriptional Network for Pluripotency of Embryonic Stem Cells
    Cell, Vol. 132, No. 6. (21 March 2008), pp. 1049-1061.
    by Jonghwan Kim, Jianlin Chu, Xiaohua Shen, Jianlong Wang, Stuart H Orkin
    posted to wide_mapping transcription by inesdesantiago on 2008-07-23 18:52:47 as **** along with 4 people kengg jyuh tmmurali maralena
  • notes THE HISTORY OF CANCER EPIGENETICS
    Nat Rev Cancer, Vol. 4, No. 2. (February 2004), pp. 143-153.
    by Andrew P Feinberg, Benjamin Tycko
    posted to cancer by inesdesantiago on 2008-01-19 18:16:59 as **** along with 1 person olympos
  • notes Structure, function and evolution of CpG island promoters.
    Cell Mol Life Sci, Vol. 60, No. 8. (August 2003), pp. 1647-1658.
    by F Antequera
    posted to review methylation by inesdesantiago on 2008-01-19 17:08:19 as **** along with 2 people imouthesmp aprasad
  • notes CpG Island Mapping by Epigenome Prediction.
    PLoS Comput Biol, Vol. 3, No. 6. (8 June 2007)
    by Christoph Bock, Jörn Walter, Martina Paulsen, Thomas Lengauer
    posted to wide_mapping prediction integration by inesdesantiago on 2008-01-19 16:27:43 as **** along with 6 people kaarsinogen sebastien_vigneau zwang oelemento fpattyn rschulz
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/user/inesdesantiago/order/to_read

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