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heliopais grn [33 articles]

最近 heliopais さんのライブラリに追加された論文の中から タグ grn. You can also see everyone's grn.
  • Least absolute regression network analysis of the murine osteoblast differentiation network
    Bioinformatics, Vol. 22, No. 4. (15 February 2006), pp. 477-484.
    by EP van Someren, BLT Vaes, WT Steegenga, AM Sijbers, KJ Dechering, MJT Reinders
    posted to grn network_inference by heliopais on 2007-12-12 16:26:11 as **
  • A Boolean algorithm for reconstructing the structure of regulatory networks
    Metabolic Engineering, Vol. 6, No. 4. (October 2004), pp. 326-339.
    by Sarika Mehra, Wei-Shou Hu, George Karypis
    posted to grn network_inference by heliopais on 2007-12-12 16:24:27 as **
  • Reverse engineering of temporal Boolean networks from noisy data using evolutionary algorithms
    Neurocomputing, Vol. 62 (December 2004), pp. 111-129.
    by Carlos Cotta, Jose M Troya
    posted to grn network_inference by heliopais on 2007-12-12 16:20:49 as **
  • Overview of computational methods for the inference of gene regulatory networks
    Computers & Chemical Engineering, Vol. 29, No. 3. (15 February 2005), pp. 519-534.
    by Mark P Styczynski, Gregory Stephanopoulos
    posted to grn network_inference by heliopais on 2007-12-12 16:18:11 as **
  • Comparing association network algorithms for reverse engineering of large-scale gene regulatory networks: synthetic versus real data
    Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. 1640-1647.
    by Nicola Soranzo, Ginestra Bianconi, Claudio Altafini
    posted to grn network_inference by heliopais on 2007-12-12 13:44:13 as ** along with 2 people roys tmmurali
  • Construction, Visualisation, and Clustering of Transcription Networks from Microarray Expression Data
    PLoS Computational Biology, Vol. 3, No. 10. (1 October 2007), e206.
    by Tom C Freeman, Leon Goldovsky, Markus Brosch, Stijn van Dongen, Pierre Mazière, Russell J Grocock, Shiri Freilich, Janet Thornton, Anton J Enright
    posted to grn network_inference by heliopais on 2007-12-12 13:39:21 as **** along with 7 people nolodie jyuh jfr sebastien_vigneau giovanni shigepong waszak
  • Utility of correlation measures in analysis of gene expression.
    NeuroRx, Vol. 3, No. 3. (July 2006), pp. 384-395.
    by A Almudevar, LB Klebanov, X Qiu, P Salzman, AY Yakovlev
    posted to grn network_inference by heliopais on 2007-12-12 13:32:59 as ** along with 1 person jfr
  • Regulatory Network Reconstruction Using Stochastic Logical Networks
    Computational Methods in Systems Biology (2006), pp. 142-154.
    by Bartek Wilczyński, Jerzy Tiuryn
    posted to grn network_inference by heliopais on 2007-12-12 13:27:00 as **
  • Comparison of probabilistic Boolean network and dynamic Bayesian network approaches for inferring gene regulatory networks
    BMC Bioinformatics, Vol. 8, No. Suppl 7. (2007)
    by Peng Li, Chaoyang Zhang, Edward Perkins, Ping Gong, Youping Deng
    posted to grn network_inference by heliopais on 2007-12-12 12:25:35 as ** along with 1 person ivokwee
  • Boolean networks using the chi-square test for inferring large-scale gene regulatory networks
    BMC Bioinformatics, Vol. 8 (01 February 2007), 37.
    by Haseong Kim, Jae K Lee, Taesung Park
    posted to grn network_inference by heliopais on 2007-12-12 12:20:57 as ** along with 1 person shigepong
  • Applying dynamic Bayesian networks to perturbed gene expression data.
    BMC Bioinformatics, Vol. 7 (2006)
    by N Dojer, A Gambin, A Mizera, B Wilczyński, J Tiuryn
    posted to grn network_inference by heliopais on 2007-12-12 12:18:58 as ** along with 3 people ivokwee tvdbulck ramakris
  • Identification of Genetic Networks
    Genetics, Vol. 166, No. 2. (1 February 2004), pp. 1037-1052.
    by Momiao Xiong, Jun Li, Xiangzhong Fang
    posted to grn network_inference by heliopais on 2007-12-12 12:17:27 as ** along with 1 person ivokwee
  • From correlation to causation networks: a simple approximate learning algorithm and its application to high-dimensional plant gene expression data
    BMC Systems Biology, Vol. 1, No. 1. (2007)
    by Rainer O Rhein, Korbinian Strimmer
    posted to grn network_inference by heliopais on 2007-12-12 12:11:42 as *** along with 3 people wnpx GeeSharpMinor jo_davies
  • A Robust Procedure For Gaussian Graphical Model Search From Microarray Data With <i>p</i> Larger Than <i>n</i>
    J. Mach. Learn. Res., Vol. 7 (2006), pp. 2621-2650.
    by Robert Castelo, Alberto Roverato
    posted to grn network_inference by heliopais on 2007-12-12 12:07:24 as ***
  • Inferring cellular networks - a review
    BMC Bioinformatics, Vol. 8, No. Suppl 6. (27 September 2007)
    by Florian Markowetz, Rainer Spang
    posted to grn network_inference review by heliopais on 2007-12-12 12:02:59 as ** along with 7 people edwardmorrissey jyuh tmmurali shigepong dejori bertelsen czeller
  • How to infer gene networks from expression profiles
    Mol Syst Biol, Vol. 3 (13 February 2007)
    by Mukesh Bansal, Vincenzo Belcastro, Alberto Ambesi-Impiombato, Diego di Bernardo
    posted to grn network_inference by heliopais on 2007-12-12 11:57:34 as ** along with 16 people and 2 groups druvus gabe_rosser cswinburne jfr eckart_bindewald wnpx nickluscombe kengg mikaelhuss jrbanga BIBLIOma RockHI lp2 natstreet mariakmejia tmmurali EBI-regulation Plantandetc
  • Biochemical and statistical network models for systems biology.
    Curr Opin Biotechnol (1 August 2007)
    by Nathan D D Price, Ilya Shmulevich
    posted to grn review by heliopais on 2007-12-12 11:53:57 as ** along with 3 people fishtank cabbagezs jyuh
  • Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles
    PLoS Biology, Vol. 5, No. 1. (1 January 2007), e8.
    by Jeremiah J Faith, Boris Hayete, Joshua T Thaden, Ilaria Mogno, Jamey Wierzbowski, Guillaume Cottarel, Simon Kasif, James J Collins, Timothy S Gardner
    posted to grn network_inference by heliopais on 2007-12-12 11:48:01 as ** along with 7 people and 2 groups icases jfr teuder nickluscombe aswin austin roys EBI-regulation TNT
  • Reverse-engineering transcription control networks
    Physics of Life Reviews, Vol. 2, No. 1. (March 2005), pp. 65-88.
    by Timothy S Gardner, Jeremiah J Faith
    posted to grn network_inference by heliopais on 2007-12-12 11:46:32 as *** along with 2 people rklancer tmmurali
  • ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context.
    BMC Bioinformatics, Vol. 7, No. Suppl 1. (20 March 2006)
    by AA Margolin, I Nemenman, K Basso, C Wiggins, G Stolovitzky, Dalla R Favera, A Califano
    posted to grn network_inference by heliopais on 2007-12-12 11:40:05 as ** along with 5 people kentsis tmmurali jfr shigepong natstreet
  • Inferring genetic networks and identifying compound mode of action via expression profiling.
    Science, Vol. 301, No. 5629. (4 July 2003), pp. 102-105.
    by TS Gardner, D di Bernardo, D Lorenz, JJ Collins
    posted to grn network_inference by heliopais on 2007-12-12 11:32:11 as *** along with 10 people and 9 groups vertikalist rklancer kentsis dragonrez rhem1224 rubendrr adepace neveaire jayster4 roys BTS-PT-AS-CS Biostatistics Computational-Genomics Bioinformatics EisenLab Neuroscience TCR_Signaling cytoskeleton-and-afm SysbioMPI-TCells
  • Linking the genes: inferring quantitative gene networks from microarray data.
    Trends Genet, Vol. 18, No. 8. (August 2002), pp. 395-398.
    by A de la Fuente, P Brazhnik, P Mendes
    posted to grn by heliopais on 2007-12-12 11:18:26 as ***** along with 2 people and 3 groups beapen pmendes Atopic_and_Seborrhoeic_Dermatitis Skin_Deep Applied_Bimatics
  • CellLine, a stochastic cell lineage simulator.
    Bioinformatics (9 October 2007)
    by Andre S S Ribeiro, Daniel A A Charlebois, Jason Lloyd-Price
    posted to grn by heliopais on 2007-12-10 13:54:27 as ** along with 2 people jyuh sebastien_vigneau
  • SGN Sim, a Stochastic Genetic Networks Simulator
    Bioinformatics, Vol. 23, No. 6. (15 March 2007), pp. 777-779.
    by Ribeiro, S Andre, Lloyd-Price, Jason
    posted to grn by heliopais on 2007-12-10 13:53:56 as ** along with 2 people Borelli HeyGey
  • Simulating cell biology.
    Curr Biol, Vol. 16, No. 14. (25 July 2006)
    by SS Andrews, AP Arkin
    posted to grn review by heliopais on 2007-12-10 12:55:06 as **** along with 1 person dagmar
  • Diversity in times of adversity: probabilistic strategies in microbial survival games.
    J Theor Biol, Vol. 234, No. 2. (21 May 2005), pp. 227-253.
    by DM Wolf, VV Vazirani, AP Arkin
    posted to bacteria grn by heliopais on 2007-12-10 12:43:52 as ** along with 3 people rklancer lingchong mhucka
  • A microbial modified prisoner's dilemma game: how frequency-dependent selection can lead to random phase variation.
    J Theor Biol, Vol. 234, No. 2. (21 May 2005), pp. 255-262.
    by DM Wolf, VV Vazirani, AP Arkin
    posted to bacteria grn prisoners_dilemma by heliopais on 2007-12-10 12:42:30 as **** along with 3 people rklancer monod lingchong
  • The B. subtilis SIN Operon: An Evolvable Network Motif.
    Genetics (30 September 2004)
    by Christopher A A Voigt, Denise Wolf, Adam P P Arkin
    posted to bacteria grn by heliopais on 2007-12-10 12:25:35 as ** along with 4 people and 1 group camster rklancer lingchong dbikard dbk-lab
  • The evolution of genetic regulatory systems in bacteria.
    Nat Rev Genet, Vol. 5, No. 3. (March 2004), pp. 169-178.
    by HH McAdams, B Srinivasan, AP Arkin
    posted to bacteria grn review by heliopais on 2007-12-10 12:21:04 as **** along with 4 people lingchong balajis nuke2005 ryang
  • Biological networks.
    Current Opinion in Structural Biology, Vol. 13, No. 2. (11 April 2003), pp. 193-202.
    by Eric Alm, Adam P Arkin
    posted to grn review by heliopais on 2007-12-10 12:12:31 as **** along with 2 people and 1 group greg griota spliceml
  • Genetic "code": representations and dynamical models of genetic components and networks.
    Annu Rev Genomics Hum Genet, Vol. 3 (2002), pp. 341-369.
    by A Gilman, AP Arkin
    posted to grn review by heliopais on 2007-12-10 12:06:44 as ****
  • Orthologous Transcription Factors in Bacteria Have Different Functions and Regulate Different Genes
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e175.
    by Morgan N Price, Paramvir S Dehal, Adam P Arkin
    posted to bacteria grn by heliopais on 2007-12-10 11:59:48 as ** along with 7 people and 3 groups operon dpollard dquest djkt zwang cabbagezs blobbybirdman EisenLab cis-regulatory-evolution Myxo group
  • Motifs, modules and games in bacteria.
    Curr Opin Microbiol, Vol. 6, No. 2. (April 2003), pp. 125-134.
    by DM Wolf, AP Arkin
    posted to bacteria grn review by heliopais on 2007-10-05 10:20:43 as **** along with 1 person and 1 group rklancer Bioinformatics
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