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gokhan library [337 articles]

最近 gokhan さんのライブラリ .
  • Role of gp120 trimerization on HIV binding elucidated with Brownian Adhesive Dynamics
    Biophys. J. (13 March 2008), biophysj.107.118430.
    by Andrew Trister, Daniel A Hammer
    posted to 350 by gokhan on 2008-04-11 13:19:07 as ***
  • Stochastic switching as a survival strategy in fluctuating environments
    Nat Genet, Vol. 40, No. 4. (April 2008), pp. 471-475.
    by Murat Acar, Jerome T Mettetal, Alexander van Oudenaarden
    posted to 349 by gokhan on 2008-04-01 13:41:06 as ** along with 10 people and 1 group brianb A_Olympia operon jjray dbikard margaritis bootsy qwermish fjvico osilander GEB
  • Comprehensive assessment and mathematical modeling of T cell population dynamics and homeostasis.
    J Immunol, Vol. 180, No. 4. (15 February 2008), pp. 2240-2250.
    by V Thomas-Vaslin, HK Altes, RJ de Boer, D Klatzmann
    posted to 348 by gokhan on 2008-03-17 15:18:23 as **
  • Transcription factor FOXO3a controls the persistence of memory CD4+ T cells during HIV infection
    Nature Medicine, Vol. 14, No. 3. (02 March 2008), pp. 266-274.
    by Julien van Grevenynghe, Francesco A Procopio, Zhong He, Nicolas Chomont, Catherine Riou, Yuwei Zhang, Sylvain Gimmig, Genevieve Boucher, Peter Wilkinson, Yu Shi, Bader Yassine-Diab, Elias A Said, Lydie Trautmann, Mohamed E Far, Robert S Balderas, Mohamed-Rachid Boulassel, Jean-Pierre Routy, Elias K Haddad, Rafick-Pierre Sekaly
    posted to 347 by gokhan on 2008-03-17 13:48:28 as ***
  • The role of the thymus in HIV infection: a 10 year perspective.
    AIDS, Vol. 22, No. 2. (11 January 2008), pp. 171-184.
    by R Ho Tsong Fang, AD Colantonio, CH Uittenbogaart
    posted to 346 by gokhan on 2008-03-12 16:04:58 as ***
  • The Impact of Monitoring HIV Patients Prior to Treatment in Resource-Poor Settings: Insights from Mathematical Modelling
    PLoS Medicine, Vol. 5, No. 3. (1 March 2008), e53.
    by Timothy B Hallett, Simon Gregson, Sabada Dube, Geoff P Garnett
    posted to 345 by gokhan on 2008-03-12 08:59:26 as **
  • Differential control of CXCR4 and CD4 downregulation by HIV-1 Gag
    Virology Journal, Vol. 5 (11 February 2008), 23.
    by Rajeshwari R Valiathan, Marilyn D Resh
    posted to 344 by gokhan on 2008-03-03 13:12:42 as **
  • Accelerated immune senescence and HIV-1 infection.
    Exp Gerontol, Vol. 42, No. 5. (May 2007), pp. 432-437.
    by V Appay, JR Almeida, D Sauce, B Autran, L Papagno
    posted to 343 by gokhan on 2008-02-20 17:07:39 as **
  • Assessing ageing of individual T lymphocytes: Mission impossible?
    Mech Ageing Dev (30 October 2007)
    by Emanuela M M Iancu, Daniel E E Speiser, Nathalie Rufer
    posted to 342 by gokhan on 2008-02-20 16:57:26 as ***
  • Primer: making sense of T-cell memory.
    Nat Clin Pract Rheumatol, Vol. 4, No. 1. (January 2008), pp. 43-49.
    by PC Beverley
    posted to 341 by gokhan on 2008-02-20 16:54:50 as ***
  • A modeling approach to the impact of HIV mutations on the immune system
    Computers in Biology and Medicine, Vol. 35, No. 1. (January 2005), pp. 1-24.
    by Elisabeta Vergu, Alain Mallet, Jean-Louis Golmard
    posted to 340 by gokhan on 2008-02-20 16:34:15 as ** along with 2 people lucianoseta emanders
  • Evaluation of HIV-1 kinetic models using quantitative discrimination analysis.
    Bioinformatics, Vol. 21, No. 8. (15 April 2005), pp. 1668-1677.
    by AL Knorr, R Srivastava
    posted to 339 by gokhan on 2008-02-20 16:21:10 as **
  • Distinct Mechanisms of CD4+ and CD8+ T-Cell Activation and Bystander Apoptosis Induced by Human Immunodeficiency Virus Type 1 Virions
    J. Virol., Vol. 79, No. 10. (15 May 2005), pp. 6299-6311.
    by Geoffrey H Holm, Dana Gabuzda
    posted to 338 by gokhan on 2008-02-20 12:47:06 as ** along with 1 person zukeboy
  • Monte Carlo estimates of natural variation in HIV infection
    Journal of Theoretical Biology, Vol. 236, No. 2. (21 September 2005), pp. 137-153.
    by Jane M Heffernan, Lindi M Wahl
    posted to 337 by gokhan on 2008-02-20 10:55:00 as ****
  • How Many Human Immunodeficiency Virus Type 1-Infected Target Cells Can a Cytotoxic T-Lymphocyte Kill?
    J. Virol., Vol. 79, No. 21. (1 November 2005), pp. 13579-13586.
    by David W Wick, Otto O Yang, Lawrence Corey, Steven G Self
    posted to 336 by gokhan on 2008-02-19 12:19:18 as ****
  • HIV-1-infected CD8+CD4+ T cells decay in vivo at a similar rate to infected CD4 T cells during HAART.
    AIDS, Vol. 22, No. 1. (2 January 2008), pp. 57-65.
    by GJ Hughes, A Cochrane, C Leen, S Morris, JE Bell, P Simmonds
    posted to 335 by gokhan on 2008-02-18 16:47:01 as ****
  • Virus immunocapture provides evidence of CD8 lymphocyte-derived HIV-1 in vivo.
    AIDS, Vol. 21, No. 12. (31 July 2007), pp. 1507-1513.
    by GJ Hughes, SJ Willey, A Cochrane, C Leen, JE Bell, P Simmonds
    posted to 334 by gokhan on 2008-02-18 16:42:19 as ***
  • HIV dynamics and immunosenescence.
    AIDS, Vol. 22, No. 2. (11 January 2008), pp. 307-309.
    by WM Getz
    posted to 333 by gokhan on 2008-02-18 15:38:06 as ***
  • Compartmentalization of the gut viral reservoir in HIV-1 infected patients
    Retrovirology, Vol. 4 (04 December 2007), 87.
    by Guido van Marle, John M Gill, Dione Kolodka, Leah Mcmanus, Tannika Grant, Deirdre L Church
    posted to 332 by gokhan on 2008-02-06 15:49:37 as ****
  • Synonymous substitution rates predict HIV disease progression as a result of underlying replication dynamics.
    PLoS Comput Biol, Vol. 3, No. 2. (16 February 2007)
    by P Lemey, SL Kosakovsky Pond, AJ Drummond, OG Pybus, B Shapiro, H Barroso, N Taveira, A Rambaut
    posted to 331 by gokhan on 2008-01-25 10:38:13 as **** along with 1 person bmaust
  • Identification of Host Proteins Required for HIV Infection Through a Functional Genomic Screen
    Science (10 January 2008), 1152725.
    by Abraham L Brass, Derek M Dykxhoorn, Yair Benita, Nan Yan, Alan Engelman, Ramnik J Xavier, Judy Lieberman, Stephen J Elledge
    posted to 330 by gokhan on 2008-01-22 12:18:26 as **** along with 5 people kieran101 tmmurali zwang davidlott renatomilani
  • Human immunodeficiency virus type 1 assembly, budding, and cell-cell spread in T cells take place in tetraspanin-enriched plasma membrane domains.
    J Virol, Vol. 81, No. 15. (August 2007), pp. 7873-7884.
    by C Jolly, QJ Sattentau
    posted to 329 by gokhan on 2008-01-18 16:49:41 as **
  • Regulated secretion from CD4+ T cells
    Trends in Immunology, Vol. 28, No. 11. (November 2007), pp. 474-481.
    by Clare Jolly, Quentin J Sattentau
    posted to 328 by gokhan on 2008-01-18 16:45:36 as ****
  • The Efficiency of Human Immunodeficiency Virus Type 1 Post-Entry Infection Processes: Evidence Against Disproportionate Numbers of Defective Virions
    J. Virol. (31 January 2007), JVI.02357-06.
    by James A Thomas, David E Ott, Robert J Gorelick
    posted to 327 by gokhan on 2008-01-18 16:19:49 as ***
  • Bursts of nonsynonymous substitutions in HIV-1 evolution reveal instances of positive selection at conservative protein sites
    Proceedings of the National Academy of Sciences, Vol. 103, No. 51. (19 December 2006), pp. 19396-19401.
    by Georgii A Bazykin, Jonathan Dushoff, Simon A Levin, Alexey S Kondrashov
    posted to 326 by gokhan on 2008-01-18 15:23:27 as ***
  • The fittest versus the flattest: experimental confirmation of the quasispecies effect with subviral pathogens.
    PLoS Pathog, Vol. 2, No. 12. (December 2006)
    by FM Codoñer, JA Darós, RV Solé, SF Elena
    posted to 325 by gokhan on 2008-01-18 09:54:27 as **
  • Error-threshold exists in fitness landscapes with lethal mutants
    BMC Evolutionary Biology, Vol. 7 (07 February 2007), 15.
    by Nobuto Takeuchi, Paulien Hogeweg
    posted to 324 by gokhan on 2008-01-18 09:49:32 as ***
  • HIV swiftly guts the immune system
    Nature Medicine, Vol. 11, No. 5., pp. 469-470.
    by Ronald S Veazey, Andrew A Lackner
    posted to 323 by gokhan on 2008-01-16 12:24:12 as *** along with 2 people Vaccine markpoliz
  • Microbial translocation is a cause of systemic immune activation in chronic HIV infection
    Nature Medicine, Vol. 12, No. 12. (19 November 2006), pp. 1365-1371.
    by Jason M Brenchley, David A Price, Timothy W Schacker, Tedi E Asher, Guido Silvestri, Srinivas Rao, Zachary Kazzaz, Ethan Bornstein, Olivier Lambotte, Daniel Altmann, Bruce R Blazar, Benigno Rodriguez, Leia Teixeira-Johnson, Alan Landay, Jeffrey N Martin, Frederick M Hecht, Louis J Picker, Michael M Lederman, Steven G Deeks, Daniel C Douek
    posted to 321 by gokhan on 2008-01-15 14:06:11 as ***
  • Differential upregulation of CD38 on different T-cell subsets may influence the ability to reconstitute CD4+ T cells under successful highly active antiretroviral therapy.
    J Acquir Immune Defic Syndr, Vol. 38, No. 4. (1 April 2005), pp. 373-381.
    by JM Benito, M López, S Lozano, C Ballesteros, P Martinez, J González-Lahoz, V Soriano
    posted to 320 by gokhan on 2008-01-14 10:23:10 as **** along with 1 person HugoMarcelo
  • Do most lymphocytes in humans really reside in the gut?
    Trends in Immunology, Vol. 28, No. 12. (December 2007), pp. 514-518.
    by Vitaly V Ganusov, Rob J De Boer
    posted to 319 by gokhan on 2008-01-11 15:15:35 as ****
  • Modeling within-host HIV-1 dynamics and the evolution of drug resistance: Trade-offs between viral enzyme function and drug susceptibility
    Journal of Theoretical Biology, Vol. 247, No. 4. (21 August 2007), pp. 804-818.
    by Libin Rong, Michael A Gilchrist, Zhilan Feng, Alan S Perelson
    posted to 318 by gokhan on 2008-01-11 14:59:10 as ***
  • Estimating drug efficacy and viral dynamic parameters: HIV and HCV
    Statistics in Medicine, Vol. 9999, No. 9999. (2007), n/a.
    by Alan S Perelson, Ruy M Ribeiro
    posted to 317 by gokhan on 2008-01-11 14:06:37 as ***
  • Dynamics of T and B lymphocyte turnover in a natural host of the simian immunodeficiency virus
    J. Virol. (21 November 2007), JVI.02197-07.
    by Amitinder Kaur, Michele Di Mascio, Amy Barabasz, Michael Rosenzweig, Harold M Mcclure, Alan S Perelson, Ruy M Ribeiro, Paul R Johnson
    posted to 316 by gokhan on 2008-01-11 14:02:49 as ****
  • Determination of virus burst size in vivo using a single-cycle SIV in rhesus macaques
    Proceedings of the National Academy of Sciences, Vol. 104, No. 48. (27 November 2007), pp. 19079-19084.
    by Hannah Y Chen, Michele Di Mascio, Alan S Perelson, David D Ho, Linqi Zhang
    posted to 315 by gokhan on 2008-01-11 14:00:48 as **** along with 2 people and 1 group magnusc wsjames Oxford Virology
  • An Evolutionary-Network Model Reveals Stratified Interactions in the V3 Loop of the HIV-1 Envelope
    PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e231.
    by Art F Poon, Fraser I Lewis, Sergei L Pond, Simon D Frost
    posted to 314 by gokhan on 2008-01-07 14:03:13 as **** along with 1 person zwang
  • Antibody microarray analysis of cell surface antigens on CD4+ and CD8+ T cells from HIV+ individuals correlates with disease stages
    Retrovirology, Vol. 4 (26 November 2007), 83.
    by Jing Q Wu, Bin Wang, Larissa Belov, Jeremy Chrisp, Jenny Learmont, Wayne B Dyer, John Zaunders, Anthony L Cunninghama, Dominic E Dwyer, Nitin K Saksena
    posted to 313 by gokhan on 2008-01-07 13:51:50 as ****
  • Localization of HIV-1 Vpr to the nuclear envelope: Impact on Vpr functions and virus replication in macrophages
    Retrovirology, Vol. 4 (26 November 2007), 84.
    by Guillaume Jacquot, Erwann L Rouzic, Annie David, Julie Mazzolini, Jerome Bouchet, Serge Bouaziz, Florence Niedergang, Gianfranco Pancino, Serge Benichou
    posted to 312 by gokhan on 2008-01-07 13:19:14 as **
  • Role of HIV-1 subtype C envelope V3 to V5 regions in viral entry, coreceptor utilization and replication efficiency in primary T-lymphocytes and monocyte-derived macrophages
    Virology Journal, Vol. 4 (24 November 2007), 126.
    by Vasudha Sundaravaradan, Suman R Das, Rajesh Ramakrishnan, Shobha Sehgal, Sarla Gopalan, Nafees Ahmad, Shahid Jameel
    posted to 311 by gokhan on 2008-01-07 13:02:28 as ****
  • CD43 signals induce Type One lineage commitment of human CD4+ T cells
    BMC Immunology, Vol. 8 (23 November 2007), 30.
    by Oscar Ramirez-Pliego, Diana L Escobar-Zarate, Gemma M Rivera-Martinez, Mayte G Cervantes-Badillo, Fernando R Esquivel-Guadarrama, Gabriela Rosas-Salgado, Yvonne Rosenstein, Angelica M Santana
    posted to 310 by gokhan on 2008-01-07 12:42:13 as ***
  • Tumors: Too sweet to remember?
    Molecular Cancer, Vol. 6 (04 December 2007), 78.
    by Peter H Vollmers, Stephanie Braendlein
    posted to 309 by gokhan on 2008-01-07 12:36:30 as **
  • Expression of Bisecting Type and Lewisx/Lewisy Terminated N-Glycans on Human Sperm
    J. Biol. Chem., Vol. 282, No. 50. (14 December 2007), pp. 36593-36602.
    by Poh-Choo Pang, Berangere Tissot, Erma Z Drobnis, Peter Sutovsky, Howard R Morris, Gary F Clark, Anne Dell
    posted to 308 by gokhan on 2008-01-07 10:33:40 as ** along with 1 person dchughes
  • A note on the effects of replenishment of depleted cells on HIV infection dynamics: A graph-theoretic approach
    Physica A: Statistical Mechanics and its Applications, Vol. 387, No. 5-6. (15 February 2008), pp. 1200-1204.
    by Simon Mukwembi
    posted to 307 by gokhan on 2008-01-02 15:17:49 as **
  • Background frequencies for residue variability estimates: BLOSUM revisited
    BMC Bioinformatics, Vol. 8 (27 December 2007), 488.
    by I Mihalek, I Res, O Lichtarge
    posted to 306 by gokhan on 2008-01-02 12:01:32 as *** along with 5 people and 1 group bicko chad_davis rabio laughcry biehl structural_bioinformatics
  • V3: HIV's switch-hitter.
    AIDS Res Hum Retroviruses, Vol. 21, No. 2. (February 2005), pp. 171-189.
    by O Hartley, PJ Klasse, QJ Sattentau, JP Moore
    posted to 305 by gokhan on 2007-11-28 16:11:28 as **
  • Complex determinants in human immunodeficiency virus type 1 envelope gp120 mediate CXCR4-dependent infection of macrophages.
    J Virol, Vol. 79, No. 21. (November 2005), pp. 13250-13261.
    by G Ghaffari, DL Tuttle, D Briggs, BR Burkhardt, D Bhatt, WA Andiman, JW Sleasman, MM Goodenow
    posted to 304 by gokhan on 2007-11-28 16:06:32 as ****
  • CCR5 use by human immunodeficiency virus type 1 is associated closely with the gp120 V3 loop N-linked glycosylation site.
    J Gen Virol, Vol. 87, No. Pt 3. (March 2006), pp. 607-612.
    by P Clevestig, L Pramanik, T Leitner, A Ehrnst
    posted to 303 by gokhan on 2007-11-28 16:03:13 as ***
  • Molecular switch for alternative conformations of the HIV-1 V3 region: implications for phenotype conversion.
    Proc Natl Acad Sci U S A, Vol. 103, No. 38. (19 September 2006), pp. 13950-13955.
    by O Rosen, M Sharon, SR Quadt-Akabayov, J Anglister
    posted to 302 by gokhan on 2007-11-28 16:00:25 as ****
  • Macrophage entry mediated by HIV Envs from brain and lymphoid tissues is determined by the capacity to use low CD4 levels and overall efficiency of fusion.
    Virology, Vol. 360, No. 1. (30 March 2007), pp. 105-119.
    by ER Thomas, RL Dunfee, J Stanton, D Bogdan, J Taylor, K Kunstman, JE Bell, SM Wolinsky, D Gabuzda
    posted to 301 by gokhan on 2007-11-28 15:46:04 as ****
  • AIDS virus envelope spike structure.
    Curr Opin Struct Biol, Vol. 17, No. 2. (April 2007), pp. 244-252.
    by KH Roux, KA Taylor
    posted to 300 by gokhan on 2007-11-28 15:10:39 as **
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