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fisherp library [253 articles]

最近 fisherp さんのライブラリ .
  • Using provenance to manage knowledge of In Silico experiments
    Brief Bioinform, Vol. 8, No. 3. (1 May 2007), pp. 183-194.
    by Robert Stevens, Jun Zhao, Carole Goble
    posted to workflows workbench web-services visualisation provenance chemoinformatics bioinformatics by fisherp on 2008-06-17 17:36:57 as *** along with 3 people alanrw moborg girschick
  • Rapid reactive oxygen species production by mitochondria in endothelial cells exposed to tumor necrosis factor-alpha is mediated by ceramide.
    Am J Respir Cell Mol Biol, Vol. 24, No. 6. (June 2001), pp. 762-768.
    by S Corda, C Laplace, E Vicaut, J Duranteau
    posted to ceramide macrophage t-cell by fisherp on 2008-03-19 15:32:19 as ***
  • Innate resistance to Trypanosoma congolense infections: differential production of nitric oxide by macrophages from susceptible BALB/c and resistant C57Bl/6 mice.
    Exp Parasitol, Vol. 92, No. 2. (June 1999), pp. 131-143.
    by RS Kaushik, JE Uzonna, JR Gordon, H Tabel
    posted to immmun-response immune immune-response immunosuppression inflammation inflammtion innmune-response resistance trypanosoma trypanosome trypanosomiasis trypanotolerance trypansomiasis by fisherp on 2008-03-18 17:51:46 as ***
  • Experimental African trypanosomiasis: differences in cytokine and nitric oxide production by macrophages from resistant and susceptible mice.
    Pathobiology, Vol. 67, No. 5-6. (1999), pp. 273-276.
    by H Tabel, RS Kaushik, J Uzonna
    posted to immmun-response immune immunosuppression infections inflammation inflammtion innmune-response resistance trypanosoma trypanosome trypanosomiasis trypanotolerance trypansomiasis by fisherp on 2008-03-18 17:49:15 as ***
  • Susceptibility and resistance to Trypanosoma congolense infections.
    Microbes Infect, Vol. 2, No. 13. (November 2000), pp. 1619-1629.
    by H Tabel, RS Kaushik, JE Uzonna
    posted to immmun-response immune immune-response immunosuppression infections inflammation inflammtion innmune-response resistance t-cell trypanosoma trypanosome trypanosomiasis trypanotolerance trypansomiasis by fisherp on 2008-03-18 17:47:57 as ***
  • Characterization of T helper cell responses to the trypanosome variant surface glycoprotein.
    J Immunol, Vol. 150, No. 7. (1 April 1993), pp. 2910-2919.
    by KW Schleifer, H Filutowicz, LR Schopf, JM Mansfield
    posted to immmun-response immune immune-response infections inflammation inflammtion innmune-response t-cell trypanosoma trypanosome trypanosomiasis trypanotolerance trypansomiasis by fisherp on 2008-03-18 17:40:49 as ***
  • Integrating Text Mining into Distributed Bioinformatics Workflows: A Web Services Implementation
    Services Computing, 2004 IEEE International Conference on (SCC'04) (2004), pp. 145-152.
    by Rob Gaizauskas, Neil Davis, George Demetriou, Yikun Guo, Ian Roberts
    posted to bioinformatics disease genotype genotype-phenotype mining sequence-analysis syndrome taverna terms text-mining web-services williams-beuren by fisherp on 2008-03-12 17:26:25 as ***
  • Text mining and its potential applications in systems biology.
    Trends Biotechnol (11 October 2006)
    by Sophia Ananiadou, Douglas B B Kell, Jun-Ichi I Tsujii
    posted to bioinformatics co-occurnace data-analysis data-driven data-mining disease genetical-genomics genome genomes genotype genotype-phenotype hypothesis-driven hypothesis-generation information-extraction metabolic metabolism metabolomic metabolomics mining networks phenomics phenotype phenotypes systematic text-mining by fisherp on 2008-02-21 13:42:33 as *** along with 11 people and 2 groups alanrw TheresaNiederberger irenas jfr yas dullhunk jacky957 daniel_schober dejori pablomendes pmendes dbk-lab T_lab
  • Nitric oxide synthesis is depressed in Bos indicus cattle infected with Trypanosoma congolense and Trypanosoma vivax and does not mediate T-cell suppression.
    Infect Immun, Vol. 64, No. 10. (October 1996), pp. 4115-4122.
    by K Taylor, V Lutje, B Mertens
    posted to boran bovine cape-buffalo genotype genotype-phenotype immmun-response immune immune-response infections inflammation inflammtion macrophage ndama nitric oxide parasitaemia parasite parasites phenotype phenotypes trypanosoma trypanosome trypanosomiasis trypanotolerance trypansomiasis by fisherp on 2008-02-17 14:49:20 as ***
  • Interaction of natural killer cells with Trypanosoma cruzi-infected fibroblasts
    Clinical & Experimental Immunology, Vol. 145, No. 2. (August 2006), pp. 357-364.
    by Lieke, , Steeg, , Graefe, , Fleischer, , Jacobs,
    posted to biological-network biological-pathways boran bovine cape-buffalo ceramide data-driven data-mining disease diseasem gene-expression genotype genotype-phenotype glycolysis host-pathogen hypothesis-generation immmun-response immune immune-response infections inflammation inflammtion innmune-response macrophage natural nitric oxidative oxide parasitaemia parasite parasites pathways phenotype phenotypes resistance t-cell trypanosoma trypanosome trypanosomiasis trypanotolerance trypansomiasis by fisherp on 2008-02-17 14:45:51 as ***
  • Nitric oxide-mediated inhibition of caspase-dependent T lymphocyte proliferation.
    J Leukoc Biol, Vol. 74, No. 3. (September 2003), pp. 403-411.
    by RS Mahidhara, RA Hoffman, S Huang, A Wolf-Johnston, Y Vodovotz, RL Simmons, TR Billiar
    posted to biological-network biological-pathways ceramide disease diseasem gene-expression genotype genotype-phenotype glycolysis hydrogen immmun-response immune immune-response infections inflammation inflammtion innmune-response macrophage nitric oxidative oxide parasitaemia parasite parasites pathway pathways peroxide phenotype phenotypes t-cell by fisherp on 2008-02-17 14:39:04 as ***
  • Nitric oxide induces apoptosis via hydrogen peroxide, but necrosis via energy and thiol depletion.
    Free Radic Biol Med, Vol. 35, No. 11. (1 December 2003), pp. 1457-1468.
    by V Borutaite, GC Brown
    posted to biological-network biological-pathways ceramide disease diseasem gene-expression genotype genotype-phenotype glycolysis host-pathogen hydrogen immune immune-response infections inflammation inflammtion innmune-response macrophage nitric oxidative oxide parasitaemia parasite parasites pathway peroxide phenotype phenotypes by fisherp on 2008-02-17 14:35:38 as ***
  • Direct effect of ceramide on the mitochondrial electron transport chain leads to generation of reactive oxygen species. Role of mitochondrial glutathione.
    J Biol Chem, Vol. 272, No. 17. (25 April 1997), pp. 11369-11377.
    by C García-Ruiz, A Colell, M Marí, A Morales, JC Fernández-Checa
    posted to apoptosis biological-network biological-pathways ceramide disease diseasem gene-expression genotype-phenotype glycolysis host-pathogen immmun-response immune immune-response inflammation inflammtion innmune-response macrophage oxidative parasitaemia parasite parasites pathway phenotype phenotypes by fisherp on 2008-02-17 14:32:43 as ***
  • Nitric oxide stimulates PC12 cell proliferation via cGMP and inhibits at higher concentrations mainly via energy depletion.
    Nitric Oxide, Vol. 14, No. 3. (May 2006), pp. 238-246.
    by A Bal-Price, J Gartlon, GC Brown
    posted to biological-network biological-pathways disease diseasem gene-expression genotype genotype-phenotype glycolysis host-pathogen immmun-response immune immune-response inflammation inflammtion innmune-response macrophage nitric oxidative oxide parasitaemia parasite parasites pathway pathways phenotype phenotypes by fisherp on 2008-02-17 14:25:37 as ***
  • Oxidative metabolism and PGC-1beta attenuate macrophage-mediated inflammation.
    Cell Metab, Vol. 4, No. 1. (July 2006), pp. 13-24.
    by D Vats, L Mukundan, JI Odegaard, L Zhang, KL Smith, CR Morel, RA Wagner, DR Greaves, PJ Murray, A Chawla
    posted to biological-network biological-pathways ceramide disease gene-expression genotype genotype-phenotype glycolysis host-pathogen immmun-response immune immune-response inflammation inflammtion innmune-response macrophage metabolism oxidative parasitaemia parasite parasites pathway pathways phenotype phenotypes by fisherp on 2008-02-17 14:22:06 as ***
  • Designer macrophages: oxidative metabolism fuels inflammation repair.
    Cell Metab, Vol. 4, No. 1. (July 2006), pp. 7-8.
    by A Lacy-Hulbert, KJ Moore
    posted to biological-network biological-pathways ceramide gene-expression genotype genotype-phenotype glycolysis immmun-response immune immune-response inflammtion innmune-response parasites pathway pathways phenotype phenotypes by fisherp on 2008-02-17 14:16:49 as ***
  • Migraine and magnesium: eleven neglected connections.
    Perspect Biol Med, Vol. 31, No. 4. (1988), pp. 526-557.
    by DR Swanson
    posted to hypothesis-driven text-mining by fisherp on 2008-02-05 14:49:46 as **
  • [Natural language processing for text mining in genome science]
    Tanpakushitsu Kakusan Koso, Vol. 46, No. 16 Suppl. (December 2001), pp. 2532-2537.
    by J Tsujii, T Ohta
    posted to language natural processiong text-mining by fisherp on 2008-02-03 17:42:06 as **
  • Fish oil, Raynaud's syndrome, and undiscovered public knowledge.
    Perspect Biol Med, Vol. 30, No. 1. (1986), pp. 7-18.
    by DR Swanson
    posted to hypothesis-generation text-mining by fisherp on 2008-02-02 17:12:54 as ** along with 3 people RafG florianleitner akastrin
  • Insulin-like growth factor-1-dependent maintenance of neuronal metabolism through the phosphatidylinositol 3-kinase-Akt pathway is inhibited by C2-ceramide in CAD cells.
    Eur J Neurosci, Vol. 25, No. 10. (May 2007), pp. 3030-3038.
    by G Arboleda, TJ Huang, C Waters, A Verkhratsky, P Fernyhough, RM Gibson
    posted to ceramide glycolysis igf1 trypanotolerance trypansomiasis by fisherp on 2008-01-28 13:56:31 as ***
  • Advances in proteomic workflows for systems biology.
    Curr Opin Biotechnol, Vol. 18, No. 4. (August 2007), pp. 378-384.
    by J Malmström, H Lee, R Aebersold
    posted to workflows by fisherp on 2008-01-21 16:33:33 as *** along with 1 person jyuh
  • The markup is the model: Reasoning about systems biology models in the Semantic Web era.
    J Theor Biol (28 November 2007)
    by Douglas B B Kell, Pedro Mendes
    posted to metabolic metabolomic metabolomics by fisherp on 2008-01-21 16:31:56 as *** along with 3 people alanrw dullhunk pmendes
  • The virtual human: Towards a global systems biology of multiscale, distributed biochemical network models.
    IUBMB Life, Vol. 59, No. 11. (November 2007), pp. 689-695.
    by DB Kell
    posted to metabolic metabolomic metabolomics by fisherp on 2008-01-21 16:30:30 as *** along with 3 people and 1 group alanrw dbk dullhunk dbk-lab
  • Automated manipulation of systems biology models using libSBML within Taverna workflows.
    Bioinformatics (1 December 2007)
    by Peter Li, Tom Oinn, Stian Soiland, Douglas B B Kell
    posted to bioinformatics biological-network data-driven gene-expression graph-based high-throughput hypothesis-generation maxdbrowse maxdload2 microarray microarrays mygrid pathway pathways taverna visualisation visulaisation web web-services workbench workflows by fisherp on 2008-01-21 16:26:30 as *** along with 6 people and 1 group alanrw dbk jyuh chad_davis dullhunk bootsy dbk-lab
  • Conceptual biology: Unearthing the gems
    Nature, Vol. 416, No. 6879. (28 March 2002), pp. 373-373.
    by Mikhail V Blagosklonny, Arthur B Pardee
    posted to data-mining disease hypothesis-driven hypothesis-generation mining text-mining by fisherp on 2007-12-12 14:42:57 as *** along with 2 people dullhunk sentausa
  • Mining MEDLINE for implicit links between dietary substances and diseases.
    Bioinformatics, Vol. 20 Suppl 1 (4 August 2004)
    by P Srinivasan, B Libbus
    posted to disease genotype-phenotype hypothesis-driven hypothesis-generation mining text-mining by fisherp on 2007-12-11 12:09:44 as ***
  • A systematic strategy for the discovery of candidate genes responsible for phenotypic variation
    BMC Bioinformatics, Vol. 8, No. Suppl 8. (2007)
    by Paul Fisher, Cornelia Hedeler, Katherine Wolstencroft, Helen Hulme, Harry Noyes, Stephen Kemp, Robert Stevens, Andrew Brass
    posted to apoptosis bioinformatics biological-pathways data-analysis data-driven data-mining daxx experimental-issues gene-expression genotype genotype-phenotype high-throughput host-pathogen hypothesis-driven hypothesis-generation mice microarray microarrays mining mygrid p53 pathway pathways phenotype phenotypes qtl quantitative resistance taverna trait transcription-loci trypanosoma trypanosome trypanosomiasis trypanotolerance trypansomiasis web-services workflows by fisherp on 2007-12-07 14:01:32 as read along with 1 person alanrw
  • A systematic strategy for large-scale analysis of genotype phenotype correlations: identification of candidate genes involved in African trypanosomiasis.
    Nucleic Acids Res, Vol. 35, No. 16. (2007), pp. 5625-5633.
    by P Fisher, C Hedeler, K Wolstencroft, H Hulme, H Noyes, S Kemp, R Stevens, A Brass
    posted to bioinformatics biological-pathways biomart data-analysis data-driven daxx genotype genotype-phenotype high-throughput hypothesis-driven hypothesis-generation mice microarray microarrays p53 pathway pathways phenotype trypanosoma trypanosome trypanosomiasis trypanotolerance trypansomiasis web-services workflows by fisherp on 2007-10-12 13:10:38 as read along with 2 people alanrw dullhunk
  • Text-derived concept profiles support assessment of DNA microarray data for acute myeloid leukemia and for androgen receptor stimulation
    BMC Bioinformatics, Vol. 8 (18 January 2007), 14.
    by Rob Jelier, Guido Jenster, Lambert CJ Dorssers, Bas J Wouters, Peter JM Hendriksen, Barend Mons, Ruud Delwel, Jan A Kors
    posted to text-mining by fisherp on 2007-09-17 15:31:01 as ** along with 4 people and 1 group jfr yas hpiwowar Barend T_lab
  • Knowledge discovery by automated identification and ranking of implicit relationships.
    Bioinformatics, Vol. 20, No. 3. (12 February 2004), pp. 389-398.
    by JD Wren, R Bekeredjian, JA Stewart, RV Shohet, HR Garner
    posted to text-mining by fisherp on 2007-09-17 14:47:39 as *** along with 2 people and 2 groups irenas yas dbk-lab T_lab
  • Finding relevant references to genes and proteins in Medline using a Bayesian approach.
    Bioinformatics, Vol. 18, No. 11. (November 2002), pp. 1515-1522.
    by JE Leonard, JB Colombe, JL Levy
    posted to text-mining by fisherp on 2007-09-17 14:37:44 as ** along with 1 person gaudan
  • Tagging gene and protein names in biomedical text.
    Bioinformatics, Vol. 18, No. 8. (August 2002), pp. 1124-1132.
    by L Tanabe, WJ Wilbur
    posted to text-mining by fisherp on 2007-09-17 14:01:14 as ** along with 7 people and 2 groups irenas jelsas zlu bundschu flint johnkork gaudan dbk-lab generif_paper
  • XplorMed: a tool for exploring MEDLINE abstracts.
    Trends Biochem Sci, Vol. 26, No. 9. (September 2001), pp. 573-575.
    by C Perez-Iratxeta, P Bork, MA Andrade
    posted to text-mining by fisherp on 2007-09-17 13:59:05 as *** along with 3 people and 1 group Enro miguel yas T_lab
  • Literature-based concept profiles for gene annotation: The issue of weighting.
    Int J Med Inform (7 September 2007)
    by Rob Jelier, Martijn J J Schuemie, Peter-Jan J Roes, Erik M M van Mulligen, Jan A A Kors
    posted to text-mining by fisherp on 2007-09-13 17:07:26 as ***
  • New directions in biomedical text annotation: definitions, guidelines and corpus construction
    BMC Bioinformatics, Vol. 7 (25 July 2006), 356.
    by John W Wilbur, Andrey Rzhetsky, Hagit Shatkay
    posted to text-mining by fisherp on 2007-09-13 17:06:16 as *** along with 4 people and 2 groups helliontroy jacky957 balex wchapman biomedical-nlp dbmi-nlp
  • Combination of text-mining algorithms increases the performance.
    Bioinformatics (9 June 2006)
    by Rainer Malik, Lude Franke, Arno Siebes
    posted to no-tag by fisherp on 2007-09-13 17:04:56 as *** along with 7 people and 4 groups soramame_0518 snuppepuppan irenas jyuh yas caporaso markymaypo dbk-lab T_lab biomedical-nlp ARTFL
  • CoPub Mapper: mining MEDLINE based on search term co-publication.
    BMC Bioinformatics, Vol. 6, No. 1. (11 March 2005)
    by Blaise T Alako, Antoine Veldhoven, Sjozef van Baal, Rob Jelier, Stefan Verhoeven, Ton Rullmann, Jan Polman, Guido Jenster
    posted to co-occurnace terms text-mining by fisherp on 2007-08-16 15:52:07 as ** along with 4 people and 1 group snuppepuppan jyuh jtextori yas T_lab
  • Co-occurrence based meta-analysis of scientific texts: retrieving biological relationships between genes.
    Bioinformatics, Vol. 21, No. 9. (1 May 2005), pp. 2049-2058.
    by R Jelier, G Jenster, LC Dorssers, CC van der Eijk, EM van Mulligen, B Mons, JA Kors
    posted to co-occurnace terms text-mining by fisherp on 2007-08-16 15:51:06 as ** along with 6 people and 2 groups irenas BioGeek yas daniel_schober vlachmore Barend dbk-lab T_lab
  • Integration of text- and data-mining using ontologies successfully selects disease gene candidates.
    Nucleic Acids Res, Vol. 33, No. 5. (2005), pp. 1544-1552.
    by N Tiffin, JF Kelso, AR Powell, H Pan, VB Bajic, WA Hide
    posted to data-analysis data-driven disease text-mining by fisherp on 2007-08-16 15:23:52 as *** along with 3 people and 2 groups irenas yas benny dbk-lab T_lab
  • Combination chemotherapy with a substance P receptor antagonist (aprepitant) and melarsoprol in a mouse model of human African trypanosomiasis.
    Parasitol Int (29 June 2007)
    by Jean Rodgers, Barbara Bradley, Peter Ge G Kennedy
    posted to gene-expression mice trypanosoma by fisherp on 2007-07-26 14:54:14 as **
  • TNF-a mediates the development of anaemia in a murine Trypanosoma brucei rhodesiense infection, but not the anaemia associated with a murine Trypanosoma congolense infection
    Clinical & Experimental Immunology, Vol. 139, No. 3. (March 2005), pp. 405-410.
    by J Naessens, H Kitani, Y Nakamura, Y Yagi, K Sekikawa, F Iraqi
    posted to gene-expression genotype-phenotype immune-response trypanosomiasis trypanotolerance by fisherp on 2007-05-17 17:13:31 as **
  • Model-based analysis of oligonucleotide arrays: model validation, design issues and standard error application
    Genome Biology, Vol. 2, No. 8. (2001), pp. research0032.1-research0032.11.
    by Cheng Li, Wing H Wong
    posted to dchip gene-expression microarray by fisherp on 2007-05-16 14:35:36 as ** along with 3 people and 1 group bertelsen RMGraze jeremymiller GeschwindLab
  • Exploration, normalization, and summaries of high density oligonucleotide array probe level data.
    Biostatistics, Vol. 4, No. 2. (April 2003), pp. 249-264.
    by RA Irizarry, B Hobbs, F Collin, YD Beazer-Barclay, KJ Antonellis, U Scherf, TP Speed
    posted to gene-expression microarray rma by fisherp on 2007-05-16 14:25:29 as ** along with 14 people and 4 groups miguel textoris Dax42 RMGraze tvdbulck dtc1 vpschulz rmk joepickrell ghattem bertelsen jo_davies waszak bakakaj MathBio Bioinformatics Computational_Systems_Biology Systems_Biology
  • METIS: multiple extraction techniques for informative sentences
    Bioinformatics, Vol. 21, No. 22. (15 November 2005), pp. 4196-4197.
    by AL Mitchell, A Divoli, JH Kim, M Hilario, I Selimas, TK Attwood
    posted to information-extraction metis text-mining by fisherp on 2007-05-14 12:26:16 as ** along with 1 person johnkork
  • iHOP web services.
    Nucleic Acids Res (7 May 2007)
    by José M M Fernández, Robert Hoffmann, Alfonso Valencia
    posted to ihop web-services by fisherp on 2007-05-12 14:42:05 as ** along with 7 people and 1 group alanrw jyuh austin balajis moborg dullhunk mroos AID
  • Wild-type p53 induces apoptosis of myeloid leukaemic cells that is inhibited by interleukin-6.
    Nature, Vol. 352, No. 6333. (25 July 1991), pp. 345-347.
    by E Yonish-Rouach, D Resnitzky, J Lotem, L Sachs, A Kimchi, M Oren
    posted to apoptosis p53 by fisherp on 2007-05-03 15:38:24 as ** along with 1 person morvencameron
  • Identification of Daxx interacting with p73, one of the p53 family, and its regulation of p53 activity by competitive interaction with PML.
    Nucleic Acids Res, Vol. 31, No. 18. (15 September 2003), pp. 5356-5367.
    by EJ Kim, JS Park, SJ Um
    posted to apoptosis daxx disease granulomatosis human p53 wegeners by fisherp on 2007-05-03 12:54:12 as **
  • Adenovirus E1B 55-kilodalton oncoprotein binds to Daxx and eliminates enhancement of p53-dependent transcription by Daxx.
    J Virol, Vol. 77, No. 21. (November 2003), pp. 11809-11821.
    by LY Zhao, AL Colosimo, Y Liu, Y Wan, D Liao
    posted to apoptosis daxx disease granulomatosis human p53 wegeners by fisherp on 2007-05-03 12:51:31 as **
  • Control of apoptosis by p53.
    Oncogene, Vol. 22, No. 56. (8 December 2003), pp. 9030-9040.
    by JS Fridman, SW Lowe
    posted to apoptosis p53 by fisherp on 2007-05-03 12:41:43 as **
  • Negative regulation of p53 functions by Daxx and the involvement of MDM2.
    J Biol Chem, Vol. 279, No. 48. (26 November 2004), pp. 50566-50579.
    by LY Zhao, J Liu, GS Sidhu, Y Niu, Y Liu, R Wang, D Liao
    posted to apoptosis daxx disease granulomatosis human wegeners by fisherp on 2007-05-03 12:40:35 as ** along with 1 person subhjap
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/user/fisherp

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