新規登録 | ログイン | FAQ      [?] 
Recent | Unread | Search | Authors | Tags | Export

evaf rna [159 articles]

最近 evaf さんのライブラリに追加された論文の中から タグ rna. You can also see everyone's rna.
  • Exploring genomic dark matter: A critical assessment of the performance of homology search methods on noncoding RNA.
    Genome Res (6 December 2006)
    by Eva K K Freyhult, Jonathan P P Bollback, Paul P P Gardner
    posted to rna homology by evaf on 2008-06-11 21:42:12 as read along with 9 people and 2 groups jfr eckart_bindewald ppgardne gpalidwor dchughes aswin bjhaugen jayster4 yoanjacquemin G4ID Genetics-of-Gambling
  • RNAbor: a web server for RNA structural neighbors.
    Nucleic Acids Res (25 May 2007)
    by Eva Freyhult, Vincent Moulton, Peter Clote
    posted to structure rna by evaf on 2008-06-11 21:39:21 as read along with 2 people and 2 groups marcius sebastien_vigneau BioinfoCIPF SGU-CIPF
  • Predicting RNA structure using mutual information.
    Appl Bioinformatics, Vol. 4, No. 1. (2005), pp. 53-59.
    by E Freyhult, V Moulton, P Gardner
    posted to bioinformatics rna structure by evaf on 2006-01-12 15:11:18 as read along with 4 people and 2 groups marcius eckart_bindewald eweaver arcticrasta BioinfoCIPF SGU-CIPF
  • Algorithms and Thermodynamics for RNA Secondary Structure Prediction: A Practical Guide.
    (1999)
    by DM&DT Zuker
    edited by JB&B Barciszewski
    posted to rna secondary_structure by evaf on 2005-05-02 08:55:07 as ** along with 1 person guxiyou
  • Modelling 'evo-devo' with RNA.
    Bioessays, Vol. 24, No. 12. (December 2002), pp. 1164-1177.
    by W Fontana
    posted to rna by evaf on 2005-04-06 15:31:53 as ** along with 3 people rklancer alexisgallagher eckart_bindewald
  • RNA folding and unfolding.
    Curr Opin Struct Biol, Vol. 14, No. 3. (June 2004), pp. 374-379.
    by B Onoa, I Tinoco
    posted to rna rna_folding by evaf on 2005-04-06 15:29:06 as ** along with 6 people and 3 groups marcius arcticrasta condon Hosna emidio_capriotti apop beta BioinfoCIPF SGU-CIPF
  • Reduced contact order and RNA folding rates.
    J Mol Biol, Vol. 342, No. 5. (1 October 2004), pp. 1359-1365.
    by TR Sosnick, T Pan
    posted to rna rna_folding by evaf on 2005-04-06 15:25:44 as *** along with 2 people and 2 groups marcius emidio_capriotti BioinfoCIPF SGU-CIPF
  • RNA folding: models and perspectives.
    Curr Opin Struct Biol, Vol. 13, No. 3. (June 2003), pp. 309-316.
    by TR Sosnick, T Pan
    posted to fold rna rna_folding by evaf on 2005-04-06 15:25:08 as *** along with 3 people and 2 groups austin marcius Hosna BioinfoCIPF SGU-CIPF
  • Prediction and statistics of pseudoknots in RNA structures using exactly clustered stochastic simulations.
    Proc Natl Acad Sci U S A, Vol. 100, No. 26. (23 December 2003), pp. 15310-15315.
    by A Xayaphoummine, T Bucher, F Thalmann, H Isambert
    posted to pseudoknot rna secondary_structure by evaf on 2005-04-06 12:21:14 as *** along with 6 people and 3 groups austin marcius arcticrasta condon Hosna Kiarostami beta BioinfoCIPF SGU-CIPF
  • RNA molecules with structure dependent functions are uniquely folded.
    Nucleic Acids Res, Vol. 30, No. 16. (15 August 2002), pp. 3574-3582.
    by SY Le, K Zhang, JV Maizel
    posted to rna secondary_structure by evaf on 2005-04-06 06:45:11 as ****
  • Co-transcriptional folding is encoded within RNA genes.
    BMC Mol. Biol., Vol. 5, No. 1. (6 August 2004)
    by IM Meyer, I Miklos
    posted to rna by evaf on 2005-03-18 08:09:02 as **** along with 4 people and 3 groups marcius condon Hosna raylim beta BioinfoCIPF SGU-CIPF
  • Plasticity, evolvability, and modularity in RNA.
    J Exp Zool, Vol. 288, No. 3. (15 October 2000), pp. 242-283.
    by LW Ancel, W Fontana
    posted to rna secondary_structure by evaf on 2005-03-14 10:01:30 as read along with 1 person amorgan
  • Vienna RNA Secondary Structure Package
    posted to rna secondary_structure by evaf on 2005-03-11 06:49:41 as read
  • Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information.
    Nucleic Acids Res, Vol. 9, No. 1. (10 January 1981), pp. 133-148.
    by M Zuker, P Stiegler
    posted to rna secondary_structure by evaf on 2005-03-10 21:23:49 as ** along with 5 people and 2 groups marcius arcticrasta mtagaya Hosna guxiyou BioinfoCIPF SGU-CIPF
  • Prediction of RNA secondary structure by energy minimization.
    Methods Mol Biol, Vol. 25 (1994), pp. 267-294.
    by M Zuker
    posted to rna secondary_structure by evaf on 2005-03-10 21:23:45 as ** along with 1 person arcticrasta
  • The European ribosomal RNA database.
    Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004)
    by J Wuyts, G Perrière, Y Van De Peer
    posted to database rna rrna by evaf on 2005-03-10 21:23:41 as **
  • Complete suboptimal folding of RNA and the stability of secondary structures.
    Biopolymers, Vol. 49, No. 2. (February 1999), pp. 145-165.
    by S Wuchty, W Fontana, IL Hofacker, P Schuster
    posted to rna secondary_structure suboptimal by evaf on 2005-03-10 21:23:36 as read along with 1 person mtw
  • No evidence that mRNAs have lower folding free energies than random sequences with the same dinucleotide distribution.
    Nucleic Acids Res, Vol. 27, No. 24. (15 December 1999), pp. 4816-4822.
    by C Workman, A Krogh
    posted to dinucleotide energy mrna rna shuffle by evaf on 2005-03-10 21:23:32 as **
  • The genome sequence of Schizosaccharomyces pombe.
    Nature, Vol. 415, No. 6874. (21 February 2002), pp. 871-880.
    by V Wood, R Gwilliam, MA Rajandream, M Lyne, R Lyne, A Stewart, J Sgouros, N Peat, J Hayles, S Baker, D Basham, S Bowman, K Brooks, D Brown, S Brown, T Chillingworth, C Churcher, M Collins, R Connor, A Cronin, P Davis, T Feltwell, A Fraser, S Gentles, A Goble, N Hamlin, D Harris, J Hidalgo, G Hodgson, S Holroyd, T Hornsby, S Howarth, EJ Huckle, S Hunt, K Jagels, K James, L Jones, M Jones, S Leather, S McDonald, J McLean, P Mooney, S Moule, K Mungall, L Murphy, D Niblett, C Odell, K Oliver, S O'Neil, D Pearson, MA Quail, E Rabbinowitsch, K Rutherford, S Rutter, D Saunders, K Seeger, S Sharp, J Skelton, M Simmonds, R Squares, S Squares, K Stevens, K Taylor, RG Taylor, A Tivey, S Walsh, T Warren, S Whitehead, J Woodward, G Volckaert, R Aert, J Robben, B Grymonprez, I Weltjens, E Vanstreels, M Rieger, M Schäfer, S Müller-Auer, C Gabel, M Fuchs, A Düsterhöft, C Fritzc, E Holzer, D Moestl, H Hilbert, K Borzym, I Langer, A Beck, H Lehrach, R Reinhardt, TM Pohl, P Eger, W Zimmermann, H Wedler, R Wambutt, B Purnelle, A Goffeau, E Cadieu, S Dréano, S Gloux, V Lelaure, S Mottier, F Galibert, SJ Aves, Z Xiang, C Hunt, K Moore, SM Hurst, M Lucas, M Rochet, C Gaillardin, VA Tallada, A Garzon, G Thode, RR Daga, L Cruzado, J Jimenez, M Sánchez, F del Rey, J Benito, A Domínguez, JL Revuelta, S Moreno, J Armstrong, SL Forsburg, L Cerutti, T Lowe, WR McCombie, I Paulsen, J Potashkin, GV Shpakovski, D Ussery, BG Barrell, P Nurse, L Cerrutti
    posted to genome rna yeast by evaf on 2005-03-10 21:23:28 as ** along with 1 person Cortel
  • Conserved RNA secondary structures in Picornaviridae genomes.
    Nucleic Acids Res, Vol. 29, No. 24. (15 December 2001), pp. 5079-5089.
    by C Witwer, S Rauscher, IL Hofacker, PF Stadler
    posted to rna secondary_structure virus by evaf on 2005-03-10 21:23:20 as ** along with 1 person ilh
  • Fast and reliable prediction of noncoding RNAs.
    Proc Natl Acad Sci U S A, Vol. 102, No. 7. (15 February 2005), pp. 2454-2459.
    by S Washietl, IL Hofacker, PF Stadler
    posted to non-coding rna by evaf on 2005-03-10 21:23:10 as ** along with 9 people and 3 groups gangli dayjm marcius eckart_bindewald tardigrade dquest Eonwe ilh raylim tulip BioinfoCIPF SGU-CIPF
  • Evaluating the predictability of conformational switching in RNA.
    Bioinformatics, Vol. 20, No. 10. (10 July 2004), pp. 1573-1582.
    by B Voss, C Meyer, R Giegerich
    posted to riboswitch rna by evaf on 2005-03-10 21:23:06 as **
  • Regulation of the vitamin B12 metabolism and transport in bacteria by a conserved RNA structural element.
    RNA, Vol. 9, No. 9. (September 2003), pp. 1084-1097.
    by AG Vitreschak, DA Rodionov, AA Mironov, MS Gelfand
    posted to regulatory_element rna by evaf on 2005-03-10 21:23:02 as **
  • Identification of 13 novel human modification guide RNAs.
    Nucleic Acids Res, Vol. 31, No. 22. (15 November 2003), pp. 6543-6551.
    by P Vitali, H Royo, H Seitz, JP Bachellerie, A Hüttenhofer, J Cavaillé
    posted to rna snorna by evaf on 2005-03-10 21:22:58 as ** along with 1 person mtagaya
  • The G x U wobble base pair. A fundamental building block of RNA structure crucial to RNA function in diverse biological systems.
    EMBO Rep, Vol. 1, No. 1. (July 2000), pp. 18-23.
    by G Varani, WH McClain
    posted to rna wobble by evaf on 2005-03-10 21:22:54 as **
  • Discovering regulatory elements in non-coding sequences by analysis of spaced dyads.
    Nucleic Acids Res, Vol. 28, No. 8. (15 April 2000), pp. 1808-1818.
    by J van Helden, AF Rios, J Collado-Vides
    posted to non-coding regulatory_element rna by evaf on 2005-03-10 21:22:50 as **
  • Improved parameters for prediction of RNA structure.
    Cold Spring Harb Symp Quant Biol, Vol. 52 (1987), pp. 123-133.
    by DH Turner, N Sugimoto, JA Jaeger, CE Longfellow, SM Freier, R Kierzek
    posted to rna secondary_structure by evaf on 2005-03-10 21:22:46 as **
  • RNA structure prediction.
    Annu Rev Biophys Biophys Chem, Vol. 17 (1988), pp. 167-192.
    by DH Turner, N Sugimoto
    posted to rna secondary_structure by evaf on 2005-03-10 21:22:41 as **
  • A GC-rich sequence within the 5' untranslated region of human basonuclin mRNA inhibits its translation.
    Gene, Vol. 237, No. 1. (3 September 1999), pp. 35-44.
    by W Tang, H Tseng
    posted to regulatory_element rna utr by evaf on 2005-03-10 21:22:29 as **
  • Mouse-centric comparative transcriptomics of protein coding and non-coding RNAs.
    Bioessays, Vol. 26, No. 8. (August 2004), pp. 833-843.
    by M Suzuki, Y Hayashizaki
    posted to coding non-coding rna by evaf on 2005-03-10 21:22:25 as **
  • Compilation of tRNA sequences and sequences of tRNA genes.
    Nucleic Acids Res, Vol. 26, No. 1. (1 January 1998), pp. 148-153.
    by M Sprinzl, C Horn, M Brown, A Ioudovitch, S Steinberg
    posted to rna trna by evaf on 2005-03-10 21:22:20 as ** along with 2 people and 1 group condon Hosna beta
  • Comparing multiple RNA secondary structures using tree comparisons.
    Comput Appl Biosci, Vol. 6, No. 4. (October 1990), pp. 309-318.
    by BA Shapiro, KZ Zhang
    posted to rna secondary_structure by evaf on 2005-03-10 21:22:12 as **
  • An algorithm for comparing multiple RNA secondary structures.
    Comput Appl Biosci, Vol. 4, No. 3. (August 1988), pp. 387-393.
    by BA Shapiro
    posted to rna secondary_structure by evaf on 2005-03-10 21:22:05 as **
  • Major identity determinants in the "augmented D helix" of tRNA(Glu) from Escherichia coli.
    J Mol Biol, Vol. 256, No. 4. (8 March 1996), pp. 685-700.
    by S Sekine, O Nureki, K Sakamoto, T Niimi, M Tateno, M Go, T Kohno, A Brisson, J Lapointe, S Yokoyama
    posted to rna trna by evaf on 2005-03-10 21:22:00 as **
  • mRNAs have greater negative folding free energies than shuffled or codon choice randomized sequences.
    Nucleic Acids Res, Vol. 27, No. 7. (1 April 1999), pp. 1578-1584.
    by W Seffens, D Digby
    posted to energy mrna rna shuffle by evaf on 2005-03-10 21:21:56 as **
  • From sequences to shapes and back: a case study in RNA secondary structures.
    Proc R Soc Lond B Biol Sci, Vol. 255, No. 1344. (22 March 1994), pp. 279-284.
    by P Schuster, W Fontana, PF Stadler, IL Hofacker
    posted to rna secondary_structure by evaf on 2005-03-10 21:21:52 as ** along with 3 people and 2 groups marcius ilh mtw BioinfoCIPF SGU-CIPF
  • Estimating the contributions of selection and self-organization in RNA secondary structure.
    J Mol Evol, Vol. 49, No. 1. (July 1999), pp. 76-83.
    by EA Schultes, PT Hraber, TH LaBean
    posted to rna secondary_structure by evaf on 2005-03-10 21:21:48 as **
  • Genome-wide searching for pseudouridylation guide snoRNAs: analysis of the Saccharomyces cerevisiae genome.
    Nucleic Acids Res, Vol. 32, No. 14. (2004), pp. 4281-4296.
    by P Schattner, WA Decatur, CA Davis, M Ares, MJ Fournier, TM Lowe
    posted to rna snorna yeast by evaf on 2005-03-10 21:21:37 as ** along with 2 people arcticrasta mtagaya
  • An iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots.
    Bioinformatics, Vol. 20, No. 1. (1 January 2004), pp. 58-66.
    by J Ruan, GD Stormo, W Zhang
    posted to pseudoknot rna by evaf on 2005-03-10 21:21:16 as ** along with 3 people and 1 group arcticrasta condon Hosna beta
  • Switching tRNA(Gln) identity from glutamine to tryptophan.
    Proc Natl Acad Sci U S A, Vol. 89, No. 8. (15 April 1992), pp. 3463-3467.
    by MJ Rogers, T Adachi, H Inokuchi, D Söll
    posted to rna trna by evaf on 2005-03-10 21:21:04 as **
  • Discrimination between glutaminyl-tRNA synthetase and seryl-tRNA synthetase involves nucleotides in the acceptor helix of tRNA.
    Proc Natl Acad Sci U S A, Vol. 85, No. 18. (September 1988), pp. 6627-6631.
    by MJ Rogers, D Söll
    posted to rna trna by evaf on 2005-03-10 21:20:59 as **
  • Staphylococcal transfer ribonucleic acids. II. Sequence analysis of isoaccepting glycine transfer ribonucleic acids IA and IB from Staphylococcus epidermidis Texas 26.
    J Biol Chem, Vol. 249, No. 15. (10 August 1974), pp. 4787-4796.
    by RJ Roberts
    posted to rna trna by evaf on 2005-03-10 21:20:56 as **
  • A dynamic programming algorithm for RNA structure prediction including pseudoknots.
    J Mol Biol, Vol. 285, No. 5. (5 February 1999), pp. 2053-2068.
    by E Rivas, SR Eddy
    posted to pseudoknot rna secondary_structure by evaf on 2005-03-10 21:20:52 as ** along with 9 people and 1 group balajis eckart_bindewald arcticrasta dquest condon Hosna jarasch physics guxiyou beta
  • Computational identification of noncoding RNAs in E. coli by comparative genomics.
    Curr Biol, Vol. 11, No. 17. (4 September 2001), pp. 1369-1373.
    by E Rivas, RJ Klein, TA Jones, SR Eddy
    posted to non-coding rna by evaf on 2005-03-10 21:20:47 as ** along with 5 people and 4 groups marcius eckart_bindewald arcticrasta dquest bsmagic Bioinformatics BioinfoCIPF bioinplant SGU-CIPF
  • Noncoding RNA gene detection using comparative sequence analysis.
    BMC Bioinformatics, Vol. 2, No. 1. (2001)
    by E Rivas, SR Eddy
    posted to comparative non-coding rna by evaf on 2005-03-10 21:20:43 as ** along with 4 people and 2 groups marcius eckart_bindewald arcticrasta jarasch BioinfoCIPF SGU-CIPF
  • Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs.
    Bioinformatics, Vol. 16, No. 7. (July 2000), pp. 583-605.
    by E Rivas, SR Eddy
    posted to rna secondary_structure by evaf on 2005-03-10 21:20:39 as ** along with 9 people and 3 groups marcius eckart_bindewald eweaver andersbj arcticrasta mtagaya dquest Eonwe ilh microRNA BioinfoCIPF SGU-CIPF
  • The language of RNA: a formal grammar that includes pseudoknots.
    Bioinformatics, Vol. 16, No. 4. (April 2000), pp. 334-340.
    by E Rivas, SR Eddy
    posted to pseudoknot rna by evaf on 2005-03-10 21:20:35 as ** along with 3 people and 1 group condon Hosna cthachuk beta
  • Generic properties of combinatory maps: neutral networks of RNA secondary structures.
    Bull Math Biol, Vol. 59, No. 2. (March 1997), pp. 339-397.
    by C Reidys, PF Stadler, P Schuster
    posted to neural_network rna secondary_structure by evaf on 2005-03-10 21:20:31 as ** along with 1 person alexisgallagher
  • Prediction of signal recognition particle RNA genes.
    Nucleic Acids Res, Vol. 30, No. 15. (1 August 2002), pp. 3368-3377.
    by M Regalia, MA Rosenblad, T Samuelsson
    posted to rna srp by evaf on 2005-03-10 21:20:22 as **
  • Structural and compositional features of untranslated regions of eukaryotic mRNAs.
    Gene, Vol. 205, No. 1-2. (31 December 1997), pp. 95-102.
    by G Pesole, S Liuni, G Grillo, C Saccone
    posted to mrna rna utr by evaf on 2005-03-10 21:20:06 as **
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/user/evaf/tag/rna

    Result page: 1 2 3 4 Next RIS BibTeX
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.