The Vienna RNA Websuite.

@article{GRUBER2008, abstract = {The Vienna RNA Websuite is a comprehensive collection of tools for folding, design and analysis of RNA sequences. It provides a web interface to the most commonly used programs of the Vienna RNA package. Among them, we find folding of single and aligned sequences, prediction of RNA-RNA interactions, and design of sequences with a given structure. Additionally, we provide analysis of folding landscapes using the barriers program and structural RNA alignments using LocARNA. The web server together with software packages for download is freely accessible at http://rna.tbi.univie.ac.at/.}, address = {Institute for Theoretical Chemistry, University of Vienna, W\"{a}hringerstra{\ss}e 17, 1090 Wien, Austria and Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, University of Leipzig, H\"{a}rtelstrasse 16-18, D-04107 Leipzig, Germany.}, author = {Gruber, Andreas R R. and Lorenz, Ronny and Bernhart, Stephan H H. and Neub\"{o}ck, Richard and Hofacker, Ivo L L. }, citeulike-article-id = {2771839}, issn = {1362-4962}, journal = {Nucleic acids research}, keywords = {vienna, webserver}, month = {April}, posted-at = {2008-05-08 15:14:59}, priority = {2}, title = {The Vienna RNA Websuite.}, url = {http://view.ncbi.nlm.nih.gov/pubmed/18424795}, year = {2008} }

TY - JOUR ID - GRUBER2008 L3 - citeulike-article-id:2771839 TI - The Vienna RNA Websuite. JF - Nucleic acids research AD - Institute for Theoretical Chemistry, University of Vienna, Währingerstraße 17, 1090 Wien, Austria and Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, University of Leipzig, Härtelstrasse 16-18, D-04107 Leipzig, Germany. SN - 1362-4962 N2 - The Vienna RNA Websuite is a comprehensive collection of tools for folding, design and analysis of RNA sequences. It provides a web interface to the most commonly used programs of the Vienna RNA package. Among them, we find folding of single and aligned sequences, prediction of RNA-RNA interactions, and design of sequences with a given structure. Additionally, we provide analysis of folding landscapes using the barriers program and structural RNA alignments using LocARNA. The web server together with software packages for download is freely accessible at http://rna.tbi.univie.ac.at/. KW - vienna KW - webserver AU - Gruber, Andreas R AU - Lorenz, Ronny AU - Bernhart, Stephan H AU - Neuböck, Richard AU - Hofacker, Ivo L PY - 2008/04/19/ UR - http://view.ncbi.nlm.nih.gov/pubmed/18424795 ER -