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eckart_bindewald protein [30 articles]

最近 eckart_bindewald さんのライブラリに追加された論文の中から タグ protein. You can also see everyone's protein.
  • Enhanced automated function prediction using distantly related sequences and contextual association by PFP
    Protein Sci, Vol. 15, No. 6. (1 June 2006), pp. 1550-1556.
    by Troy Hawkins, Stanislav Luban, Daisuke Kihara
    posted to automated function prediction protein by eckart_bindewald on 2008-03-18 17:31:40 as ** along with 1 person sgoetz
  • Function prediction of uncharacterized proteins.
    J Bioinform Comput Biol, Vol. 5, No. 1. (February 2007), pp. 1-30.
    by T Hawkins, D Kihara
    posted to function prediction protein by eckart_bindewald on 2008-03-18 17:29:55 as ***
  • Predicting Protein Function with Hierarchical Phylogenetic Profiles: The Gene3D Phylo-Tuner Method Applied to Eukaryotic Genomes
    PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e237.
    by Juan A Ranea, Corin Yeats, Alastair Grant, Christine A Orengo
    posted to 3d function phylogenetic prediction protein by eckart_bindewald on 2008-03-18 17:26:00 as ***** along with 4 people skhadar zwang asddd hpaces
  • GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes.
    BMC Bioinformatics, Vol. 5 (18 November 2004)
    by DM Martin, M Berriman, GJ Barton
    posted to function go prediction protein by eckart_bindewald on 2008-03-18 17:21:27 as **** along with 3 people Sharpshoot sgoetz bootsy
  • Global self-organization of all known protein sequences reveals inherent biological signatures
    Journal of Molecular Biology, Vol. 268, No. 2. (2 May 1997), pp. 539-556.
    by Michal Linial, Nathan Linial, Naftali Tishby, Golan Yona
    posted to fingerprint function gene prediction protein signature by eckart_bindewald on 2008-03-14 16:41:33 as ****
  • A skin microRNA promotes differentiation by repressing ‘stemness’
    Nature (02 March 2008)
    by Rui Yi, Matthew N Poy, Markus Stoffel, Elaine Fuchs
    posted to expression function microrna protein skin by eckart_bindewald on 2008-03-06 13:07:58 as ***** along with 5 people and 1 group heliopais hplatero Alexander_Kanitz maralena snowcrash microRNA
  • Computational analysis of biological functions and pathways collectively targeted by co-expressed microRNAs in cancer
    BMC Bioinformatics, Vol. 8, No. Suppl 7. (2007)
    by Yuriy Gusev, Thomas Schmittgen, Megan Lerner, Russell Postier, Daniel Brackett
    posted to analysis cancer function microrna pathway prediction protein by eckart_bindewald on 2008-03-03 16:07:17 as *** along with 5 people jfr ealloza vinithepooh yugusev maralena
  • Term-tissue specific models for prediction of gene ontology biological processes using transcriptional profiles of aging in drosophila melanogaster
    BMC Bioinformatics, Vol. 9 (28 February 2008), 129.
    by Wensheng Zhang, Sige Zou, Jiuzhou Song
    posted to function microarray prediction protein by eckart_bindewald on 2008-03-03 15:19:20 as ****
  • High-resolution structure prediction and the crystallographic phase problem
    Nature (14 October 2007)
    by Bin Qian, Srivatsan Raman, Rhiju Das, Philip Bradley, Airlie J Mccoy, Randy J Read, David Baker
    posted to ab_initio crystallography nmr prediction protein star3 structure x-ray by eckart_bindewald on 2007-11-19 12:47:07 as ***** along with 15 people and 2 groups apaydin aheilbut jwm chad_davis ffranca dgront massivemayhem cjeans zwang cactus sobolevnrm boris_aguilar Ema chenway ardalby baker-group OPIG
  • Small libraries of protein fragments model native protein structures accurately.
    J Mol Biol, Vol. 323, No. 2. (18 October 2002), pp. 297-307.
    by R Kolodny, P Koehl, L Guibas, M Levitt
    posted to assembly fragment prediction protein structure by eckart_bindewald on 2007-03-09 17:30:58 as ** along with 3 people and 2 groups ana barry j3xucite structural_bioinformatics Bioinformatics
  • Creation and characterization of a new, non-redundant fragment data bank.
    Protein Eng, Vol. 10, No. 6. (June 1997), pp. 659-664.
    by U Lessel, D Schomburg
    posted to database fragment protein by eckart_bindewald on 2007-03-09 17:29:36 as ** along with 1 person iakes
  • Sequence-structure specificity--how does an inverse folding approach work?
    Protein Eng, Vol. 10, No. 4. (April 1997), pp. 317-331.
    by WP Hu, A Godzik, J Skolnick
    posted to assembly folding fragment inverse protein structure by eckart_bindewald on 2007-03-09 17:28:09 as **
  • On the nature of the protein folding code.
    Proc Natl Acad Sci U S A, Vol. 90, No. 2. (15 January 1993), pp. 644-648.
    by S Rackovsky
    posted to assembly fragment prediction protein structure by eckart_bindewald on 2007-03-09 17:23:49 as **
  • Predicting novel protein folds by using FRAGFOLD.
    Proteins, Vol. Suppl 5 (2001), pp. 127-132.
    by DT Jones
    posted to assembly fragment prediction protein structure by eckart_bindewald on 2007-03-09 17:15:43 as **
  • Combining local-structure, fold-recognition, and new fold methods for protein structure prediction.
    Proteins, Vol. 53 Suppl 6 (2003), pp. 491-496.
    by K Karplus, R Karchin, J Draper, J Casper, Y Mandel-Gutfreund, M Diekhans, R Hughey
    posted to fragment library prediction protein structure by eckart_bindewald on 2007-03-09 17:14:18 as ** along with 1 person j3xucite
  • Some fundamental aspects of building protein structures from fragment libraries.
    Protein Sci, Vol. 13, No. 6. (June 2004), pp. 1636-1650.
    by JB Holmes, J Tsai
    posted to fragment library prediction protein structure by eckart_bindewald on 2007-03-09 17:11:21 as ** along with 2 people and 2 groups barry wouterboomsma structural_bioinformatics Bioinformatics
  • Shaping up the protein folding funnel by local interaction: Lesson from a structure prediction study
    PNAS, Vol. 103, No. 9. (28 February 2006), pp. 3141-3146.
    by George Chikenji, Yoshimi Fujitsuka, Shoji Takada
    posted to assembly fragment prediction protein structure by eckart_bindewald on 2007-03-09 17:08:04 as ** along with 3 people wouterboomsma rsantana saunders
  • ArchPRED: a template based loop structure prediction server.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006)
    by N Fernandez-Fuentes, J Zhai, A Fiser
    posted to loop prediction protein secondary_structure by eckart_bindewald on 2007-03-09 17:06:27 as ** along with 2 people vavi cdeane
  • A Consensus Data Mining secondary structure prediction by combining GOR V and Fragment Database Mining.
    Protein Sci, Vol. 15, No. 11. (November 2006), pp. 2499-2506.
    by TZ Sen, H Cheng, A Kloczkowski, RL Jernigan
    posted to fragment protein secondary_structure by eckart_bindewald on 2007-03-09 17:04:38 as **
  • Designing a nanotube using naturally occurring protein building blocks.
    PLoS Comput Biol, Vol. 2, No. 4. (April 2006)
    by CJ Tsai, J Zheng, R Nussinov
    posted to block building fragment nanotechnology protein by eckart_bindewald on 2007-03-09 16:52:42 as ***
  • Structure by design: from single proteins and their building blocks to nanostructures.
    Trends Biotechnol, Vol. 24, No. 10. (October 2006), pp. 449-454.
    by CJ Tsai, J Zheng, C Alemán, R Nussinov
    posted to block building fragment nanotechnology protein by eckart_bindewald on 2007-03-09 16:51:38 as **
  • Why are proteins so robust to site mutations?
    J Mol Biol, Vol. 315, No. 3. (18 January 2002), pp. 479-484.
    by DM Taverna, RA Goldstein
    posted to sequence robustness protein mutation design by eckart_bindewald on 2007-01-11 12:39:58 as *** along with 3 people kaarsinogen cdeane bpcusack
  • Protein-RNA interactions: exploring binding patterns with a three-dimensional superposition analysis of high resolution structures.
    Bioinformatics (11 September 2006)
    by N Morozova, J Allers, J Myers, Y Shamoo
    posted to interactions protein rna by eckart_bindewald on 2006-09-14 15:18:05 as ** along with 3 people and 2 groups kaarsinogen marcius medic0747 BioinfoCIPF SGU-CIPF
  • Computational methods for the prediction of protein interactions.
    Curr Opin Struct Biol, Vol. 12, No. 3. (June 2002), pp. 368-373.
    by A Valencia, F Pazos
    posted to 3d information mutual protein structure by eckart_bindewald on 2006-03-07 20:41:59 as *** along with 2 people chad_davis marti
  • Evolutionarily Conserved Pathways of Energetic Connectivity in Protein Families
    Science, Vol. 286, No. 5438. (08 October 1999), pp. 295-299.
    by Steve W Lockless, Rama Ranganathan
    posted to 3d information mutual protein structure by eckart_bindewald on 2006-03-07 20:37:57 as **** along with 15 people and 5 groups stevanspringer Einat marcius analogAI dgront caporaso sriram_s choonpeng Haggan rabio mottonen zambujo mingzhi bethbromley ca3295 structural_bioinformatics FAB-lab biomedical-nlp BioinfoCIPF SGU-CIPF
  • Evolutionarily conserved networks of residues mediate allosteric communication in proteins.
    Nat Struct Biol, Vol. 10, No. 1. (January 2003), pp. 59-69.
    by GM Süel, SW Lockless, MA Wall, R Ranganathan
    posted to 3d information mutual protein structure by eckart_bindewald on 2006-03-07 20:32:37 as *** along with 15 people and 3 groups lna dimka marcius gbart analogAI nirfriedman dgront caporaso choonpeng efge carlescorbi mingzhi yalexeev weisblum ca3295 biomedical-nlp BioinfoCIPF SGU-CIPF
  • Identification of native protein folds amongst a large number of incorrect models. The calculation of low energy conformations from potentials of mean force.
    J Mol Biol, Vol. 216, No. 1. (5 November 1990), pp. 167-180.
    by M Hendlich, P Lackner, S Weitckus, H Floeckner, R Froschauer, K Gottsbacher, G Casari, MJ Sippl
    posted to potential protein statistical by eckart_bindewald on 2006-01-06 15:29:19 as ** along with 1 person apostola
  • Knowledge-based potentials for proteins.
    Curr Opin Struct Biol, Vol. 5, No. 2. (April 1995), pp. 229-235.
    by MJ Sippl
    posted to potential protein statistical by eckart_bindewald on 2006-01-06 15:27:25 as *** along with 4 people and 2 groups chad_davis marcius tolot27 janasont BioinfoCIPF SGU-CIPF
  • Lattice protein folding with two and four-body statistical potentials.
    Proteins, Vol. 43, No. 2. (1 May 2001), pp. 161-174.
    by HH Gan, A Tropsha, T Schlick
    posted to potential protein statistical by eckart_bindewald on 2006-01-06 15:24:56 as **
  • Statistical potentials for fold assessment.
    Protein Sci, Vol. 11, No. 2. (February 2002), pp. 430-448.
    by F Melo, R Sánchez, A Sali
    posted to potential protein statistical by eckart_bindewald on 2006-01-06 15:23:10 as ** along with 2 people and 2 groups barry dgront structural_bioinformatics Bioinformatics
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