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eckart_bindewald alignment [18 articles]

最近 eckart_bindewald さんのライブラリに追加された論文の中から タグ alignment. You can also see everyone's alignment.
  • Combining phylogenetic data with co-regulated genes to identify regulatory motifs.
    Bioinformatics, Vol. 19, No. 18. (12 December 2003), pp. 2369-2380.
    by T Wang, GD Stormo
    posted to alignment discovery motif ortholog phylogenetic by eckart_bindewald on 2008-03-25 20:43:30 as *** along with 3 people balajis dquest natstreet
  • Combining Statistical Alignment and Phylogenetic Footprinting to Detect Regulatory Elements.
    Bioinformatics (18 March 2008)
    by R Satija, L Pachter, J Hein
    posted to alignment elements regulatory statistical by eckart_bindewald on 2008-03-21 18:29:41 as **** along with 4 people Stew Ema gjuggler maximilianh
  • Stem kernels for RNA sequence analyses.
    J Bioinform Comput Biol, Vol. 5, No. 5. (October 2007), pp. 1103-1122.
    by Y Sakakibara, K Popendorf, N Ogawa, K Asai, K Sato
    posted to alignment noncoding prediction rna sequence by eckart_bindewald on 2007-10-17 18:33:48 as **
  • Minimus: a fast, lightweight genome assembler
    BMC Bioinformatics, Vol. 8 (26 February 2007), 64.
    by Daniel D Sommer, Arthur L Delcher, Steven L Salzberg, Mihai Pop
    posted to alignment assembly genome by eckart_bindewald on 2007-03-01 11:28:55 as ***
  • Multiple structural alignment and clustering of RNA sequences.
    Bioinformatics (25 February 2007)
    by Elfar Torarinsson, Jakob H H Havgaard, Jan Gorodkin
    posted to alignment rna secondary secondary_structure structure by eckart_bindewald on 2007-03-01 11:27:50 as *** along with 7 people and 2 groups marcius eweaver ppgardne ilh zwang dunnp zhouyu BioinfoCIPF SGU-CIPF
  • Noncoding RNA gene detection using comparative sequence analysis.
    BMC Bioinformatics, Vol. 2, No. 1. (2001)
    by E Rivas, SR Eddy
    posted to alignment noncoding prediction rna secondary_structure by eckart_bindewald on 2007-01-05 20:01:59 as **** along with 4 people and 2 groups evaf marcius arcticrasta jarasch BioinfoCIPF SGU-CIPF
  • RNAs everywhere: genome-wide annotation of structured RNAs.
    J Exp Zoolog B Mol Dev Evol (14 December 2006)
    by Rolf Backofen, Stephan H H Bernhart, Christoph Flamm, Claudia Fried, Guido Fritzsch, Jörg Hackermüller, Jana Hertel, Ivo L L Hofacker, Kristin Missal, Axel Mosig, Sonja J J Prohaska, Dominic Rose, Peter F F Stadler, Andrea Tanzer, Stefan Washietl, Sebastian Will
    posted to alignment conserved noncoding prediction rna by eckart_bindewald on 2006-12-21 14:32:50 as read along with 11 people and 5 groups jfr bala marcius tardigrade andersbj penka cdawson ilh raylim jayster4 maralena microRNA BioinfoCIPF SGU-CIPF DictyosteliumGroup GIG
  • Thousands of corresponding human and mouse genomic regions unalignable in primary sequence contain common RNA structure.
    Genome Res (2 June 2006)
    by Elfar Torarinsson, Milena Sawera, Jakob H H Havgaard, Merete Fredholm, Jan Gorodkin
    posted to alignment conserved noncoding prediction rna by eckart_bindewald on 2006-12-21 14:29:08 as **** along with 2 people and 1 group dpollard mtagaya EisenLab
  • ddbRNA: detection of conserved secondary structures in multiple alignments.
    Bioinformatics, Vol. 19, No. 13. (1 September 2003), pp. 1606-1611.
    by D di Bernardo, T Down, T Hubbard
    posted to alignment conserved noncoding prediction rna by eckart_bindewald on 2006-12-21 14:09:32 as **** along with 2 people and 2 groups arcticrasta bsmagic Bioinformatics bioinplant
  • Trade-offs in detecting evolutionarily constrained sequence by comparative genomics.
    Annu Rev Genomics Hum Genet, Vol. 6 (2005), pp. 143-164.
    by EA Stone, GM Cooper, A Sidow
    posted to alignment conserved genome by eckart_bindewald on 2006-12-20 13:40:04 as read along with 2 people jwortman aprasad
  • QOMA: Quasi-Optimal Multiple Alignment of protein sequences.
    Bioinformatics (22 November 2006)
    by Xu Zhang, Tamer Kahveci
    posted to alignment sequence by eckart_bindewald on 2006-11-27 17:03:34 as **
  • BAli-Phy: simultaneous Bayesian inference of alignment and phylogeny.
    Bioinformatics (5 May 2006)
    by Marc A A Suchard, Benjamin D D Redelings
    posted to alignment bayesian phylogenetic by eckart_bindewald on 2006-05-09 20:08:05 as **** along with 3 people and 1 group aprasad indigoviolet AaronDarling EisenLab
  • StrAl: progressive alignment of non-coding RNA using base pairing probability vectors in quadratic time
    Bioinformatics, Vol. 22, No. 13. (1 July 2006), pp. 1593-1599.
    by Dalli, Deniz, Wilm, Andreas, Mainz, Indra, Steger, Gerhard
    posted to alignment rna by eckart_bindewald on 2006-04-17 18:27:55 as **** along with 4 people and 4 groups marcius ilh papamicd bsmagic Bioinformatics BioinfoCIPF bioinplant SGU-CIPF
  • PhyME: a probabilistic algorithm for finding motifs in sets of orthologous sequences.
    BMC Bioinformatics, Vol. 5 (28 October 2004)
    by S Sinha, M Blanchette, M Tompa
    posted to alignment motif prediction by eckart_bindewald on 2006-03-17 14:57:11 as read along with 4 people dquest adsmitty lusk xili03
  • Choosing the best heuristic for seeded alignment of DNA sequences.
    BMC Bioinformatics, Vol. 7, No. 1. (13 March 2006)
    by Yanni Sun, Jeremy Buhler
    posted to alignment dna by eckart_bindewald on 2006-03-16 14:06:28 as read along with 1 person nedwards
  • Genome-Wide Identification of Human Functional DNA Using a Neutral Indel Model.
    PLoS Comput Biol, Vol. 2, No. 1. (13 January 2006)
    by Gerton Lunter, Chris P P Ponting, Jotun Hein
    posted to alignment dna rna statistical by eckart_bindewald on 2006-02-06 12:30:50 as **** along with 8 people and 2 groups aprasad eweaver lhonigberg acidwizard juliettecolinas Stew cisevol mailund EisenLab cis-regulatory-evolution
  • Mulan: multiple-sequence local alignment and visualization for studying function and evolution.
    Genome Res, Vol. 15, No. 1. (January 2005), pp. 184-194.
    by I Ovcharenko, GG Loots, BM Giardine, M Hou, J Ma, RC Hardison, L Stubbs, W Miller
    posted to alignment genome visualization by eckart_bindewald on 2006-01-27 21:38:54 as *** along with 3 people and 2 groups Neeperando jwortman dchughes G4ID Genetics-of-Gambling
  • Secondary structure prediction for aligned RNA sequences.
    J Mol Biol, Vol. 319, No. 5. (21 June 2002), pp. 1059-1066.
    by IL Hofacker, M Fekete, PF Stadler
    posted to alignment prediction rna secondary structure by eckart_bindewald on 2006-01-04 14:02:23 as read along with 7 people evaf balajis ppgardne arcticrasta ilh xiaobeizhao raylim
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/user/eckart_bindewald/tag/alignment

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