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dpollard drosophila [114 articles]

最近 dpollard さんのライブラリに追加された論文の中から タグ drosophila. You can also see everyone's drosophila.
  • Hitchhiking effects of recurrent beneficial amino acid substitutions in the Drosophila melanogaster genome
    Genome Res. (7 November 2007), gr.6691007.
    by Peter Andolfatto
    posted to drosophila hitchhiking positive_selection by dpollard on 2008-02-13 06:38:24 as *** along with 3 people and 1 group djkt usagi-kirin mimulus_99 EisenLab
  • Delimiting the conserved features of hunchback function for the trunk organization of insects.
    Development (23 January 2008)
    by Henrique Marques-Souza, Manuel Aranda, Diethard Tautz
    posted to drosophila expression_pattern gene_function_evolution insects pattern targets transcription_factor tribolium by dpollard on 2008-02-01 06:06:53 as ** along with 1 group EisenLab
  • Inferring genome-scale rearrangement phylogeny and ancestral gene order: A Drosophila case study
    Genome Biology, Vol. 8 (08 November 2007), R236.
    by Arjun Bhutkar, William M Gelbart, Temple F Smith
    posted to drosophila phylogeny by dpollard on 2008-01-11 18:06:11 as *** along with 5 people and 1 group isimpson indigoviolet balicea maximilianh hpaces EisenLab
  • Contrasting the Efficacy of Selection on the X and Autosomes in Drosophila.
    Mol Biol Evol (13 December 2007)
    by Nadia D D Singh, Amanda M M Larracuente, Andrew G G Clark
    posted to drosophila selection x_vs_autosomes by dpollard on 2008-01-11 18:03:53 as **** along with 1 group EisenLab
  • Evolutionary changes in cis and trans gene regulation
    Nature, Vol. 430, No. 6995. (1 July 2004), pp. 85-88.
    by Patricia J Wittkopp, Belinda K Haerum, Andrew G Clark
    posted to cis_vs_trans drosophila expression_divergence expression_polymorphism hybrid regulatory_evolution regulatory_polymorphism by dpollard on 2007-12-05 22:58:32 as read along with 8 people and 2 groups lyongu balicea tabu adepace emmahe emarker mimulus_99 cisevol EisenLab cis-regulatory-evolution
  • Chance caught on the wing: cis-regulatory evolution and the origin of pigment patterns in Drosophila.
    Nature, Vol. 433, No. 7025. (3 February 2005), pp. 481-487.
    by N Gompel, B Prud'homme, PJ Wittkopp, VA Kassner, SB Carroll
    posted to binding_site cis_regulatory_elements drosophila pigmentation regulatory_evolution regulatory_sequence_evolution turnover by dpollard on 2007-12-05 22:48:37 as read along with 5 people and 2 groups pradiptaray emilyhare adepace cisevol emptyhb EisenLab cis-regulatory-evolution
  • Genome-wide analysis of clustered Dorsal binding sites identifies putative target genes in the Drosophila embryo.
    Proc Natl Acad Sci U S A, Vol. 99, No. 2. (22 January 2002), pp. 763-768.
    by M Markstein, P Markstein, V Markstein, MS Levine
    posted to cis_regulatory_elements clustering drosophila embryonic_patterning method prediction by dpollard on 2007-12-05 20:41:26 as read along with 1 person and 1 group indigoviolet EisenLab
  • Transcriptional regulation of a pair-rule stripe in Drosophila.
    Genes Dev, Vol. 5, No. 5. (May 1991), pp. 827-839.
    by S Small, R Kraut, T Hoey, R Warrior, M Levine
    posted to drosophila embryonic_patterning grammar repression seminal_paper by dpollard on 2007-12-05 19:31:27 as ** along with 1 person and 1 group lusk EisenLab
  • Accurate gene-tree reconstruction by learning gene- and species-specific substitution rates across multiple complete genomes
    Genome Res. (7 November 2007), gr.7105007.
    by Matthew D Rasmussen, Manolis Kellis
    posted to drosophila method phylogeny prediction yeast by dpollard on 2007-11-21 02:56:16 as read along with 2 people and 1 group stajich caseybrown EisenLab
  • Dynamics and function of intron sequences of the wingless gene during the evolution of the Drosophila genus.
    Evol Dev, Vol. 6, No. 5. (t 2004), pp. 325-335.
    by J Costas, PS Pereira, CP Vieira, S Pinho, J Vieira, F Casares
    posted to cis_regulatory_elements drosophila expression_divergence expression_pattern turnover by dpollard on 2007-11-21 01:23:45 as read along with 2 groups EisenLab cis-regulatory-evolution
  • Turnover of binding sites for transcription factors involved in early Drosophila development.
    Gene, Vol. 310 (22 May 2003), pp. 215-220.
    by J Costas, F Casares, J Vieira
    posted to binding_site cis_regulatory_elements drosophila turnover by dpollard on 2007-11-21 01:22:24 as read along with 1 person and 2 groups cisevol EisenLab cis-regulatory-evolution
  • Unmasking Activation of the Zygotic Genome Using Chromosomal Deletions in the Drosophila Embryo
    PLoS Biology, Vol. 5, No. 5. (1 May 2007), e117.
    by Stefano De Renzis, Olivier Elemento, Saeed Tavazoie, Eric F Wieschaus
    posted to drosophila eisen_journal_club embryo gene_expression matt_presented round_robin by dpollard on 2007-11-17 00:09:40 as ** along with 1 person and 2 groups wrowell EisenLab Cline_lab
  • Global analysis of patterns of gene expression during Drosophila embryogenesis
    Genome Biology, Vol. 8 (23 July 2007), R145.
    by Pavel Tomancak, Benjamin P Berman, Amy Beaton, Richard Weiszmann, Elaine Kwan, Volker Hartenstein, Susan E Celniker, Gerald M Rubin
    posted to drosophila eisen_journal_club embryonic_patterning expression_pattern gene_expression matt_presented round_robin by dpollard on 2007-11-17 00:04:12 as read along with 1 person and 1 group caseybrown EisenLab
  • Reliable prediction of regulator targets using 12 Drosophila genomes.
    Genome Res (7 November 2007)
    by Alexander Stark, Pouya Kheradpour, Sushmita Roy, Manolis Kellis
    posted to cis_regulatory_elements drosophila eisen_journal_club matt_presented prediction round_robin by dpollard on 2007-11-17 00:01:32 as *** along with 7 people and 2 groups lp2 nklee maximilianh roys caseybrown emptyhb barwil EisenLab cis-regulatory-evolution
  • Constraint and turnover in sex-biased gene expression in the genus Drosophila
    Nature, Vol. 450, No. 7167., pp. 233-237.
    by Yu Zhang, David Sturgill, Michael Parisi, Sudhir Kumar, Brian Oliver
    posted to dan_presented drosophila eisen_journal_club expression_divergence gene_expression round_robin by dpollard on 2007-11-16 23:49:54 as read along with 1 person and 2 groups indigoviolet EisenLab cis-regulatory-evolution
  • The regulatory content of intergenic DNA shapes genome architecture.
    Genome Biol, Vol. 5, No. 4. (2004)
    by CE Nelson, BM Hersh, SB Carroll
    posted to drosophila gene_expression genome_architecture nematode noncoding by dpollard on 2007-11-14 21:21:28 as read along with 4 people and 3 groups madhadron elzodw blobbybirdman cisevol EisenLab cis-regulatory-evolution BergmanLab
  • Large-Scale Discovery of Promoter Motifs in Drosophila melanogaster
    PLoS Computational Biology, Vol. 3, No. 1. (1 January 2007), e7.
    by Thomas A Down, Casey M Bergman, Jing Su, Tim J Hubbard
    posted to binding_site cis_regulatory_elements drosophila motif_detection by dpollard on 2007-11-14 21:19:05 as read along with 6 people and 1 group isimpson indigoviolet dquest SeungjoonOh nklee emptyhb EisenLab
  • Principles of Genome Evolution in the Drosophila melanogaster Species Group
    PLoS Biology, Vol. 5, No. 6. (1 June 2007), e152.
    by José M Ranz, Damien Maurin, Yuk S Chan, Marcin von Grotthuss, Ladeana W Hillier, John Roote, Michael Ashburner, Casey M Bergman
    posted to drosophila evolution genome_architecture inversion by dpollard on 2007-11-14 21:16:50 as ** along with 4 people and 1 group operon zwang nosada17 maximilianh EisenLab
  • Purifying Selection Maintains Highly Conserved Noncoding Sequences in Drosophila.
    Mol Biol Evol (23 July 2007)
    by Sònia Casillas, Antonio Barbadilla, Casey M M Bergman
    posted to conserved drosophila noncoding polymorphism population_genetics purifying selection by dpollard on 2007-11-14 21:15:01 as read along with 7 people and 2 groups brant operon emilyhare Garamonfok Stew cisevol emptyhb EisenLab cis-regulatory-evolution
  • Rapid sequence turnover at an intergenic locus in Drosophila.
    Mol Biol Evol, Vol. 21, No. 4. (April 2004), pp. 670-680.
    by ND Singh, DA Petrov
    posted to drosophila genome_architecture genome_size indels noncoding by dpollard on 2007-11-14 21:13:48 as read along with 1 group EisenLab
  • Pseudogene evolution in Drosophila suggests a high rate of DNA loss.
    Mol Biol Evol, Vol. 15, No. 11. (November 1998), pp. 1562-1567.
    by DA Petrov, YC Chao, EC Stephenson, DL Hartl
    posted to drosophila genome_architecture genome_size indels pseudogene by dpollard on 2007-11-14 21:12:54 as ** along with 1 person and 1 group skumagai EisenLab
  • How intron splicing affects the deletion and insertion profile in Drosophila melanogaster.
    Genetics, Vol. 162, No. 3. (November 2002), pp. 1233-1244.
    by SE Ptak, DA Petrov
    posted to drosophila genome_architecture genome_size indels splicing by dpollard on 2007-11-14 21:12:02 as ** along with 1 group EisenLab
  • DNA loss and evolution of genome size in Drosophila.
    Genetica, Vol. 115, No. 1. (May 2002), pp. 81-91.
    by DA Petrov
    posted to drosophila genome_architecture genome_size indels by dpollard on 2007-11-14 21:11:15 as ** along with 1 person and 1 group timflutre EisenLab
  • Pseudogene evolution and natural selection for a compact genome.
    J Hered, Vol. 91, No. 3. (n 2000), pp. 221-227.
    by DA Petrov, DL Hartl
    posted to drosophila genome_architecture genome_size indels pseudogene selection by dpollard on 2007-11-14 21:01:00 as ** along with 1 group EisenLab
  • Evidence for DNA loss as a determinant of genome size.
    Science, Vol. 287, No. 5455. (11 February 2000), pp. 1060-1062.
    by DA Petrov, TA Sangster, JS Johnston, DL Hartl, KL Shaw
    posted to drosophila genome_architecture genome_size indels insects by dpollard on 2007-11-14 20:59:23 as ** along with 1 person and 2 groups penka EisenLab Nie
  • High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups.
    Mol Biol Evol, Vol. 15, No. 3. (March 1998), pp. 293-302.
    by DA Petrov, DL Hartl
    posted to drosophila genome_architecture genome_size indels by dpollard on 2007-11-14 20:58:27 as ** along with 1 person and 1 group skumagai EisenLab
  • Trash DNA is what gets thrown away: high rate of DNA loss in Drosophila.
    Gene, Vol. 205, No. 1-2. (31 December 1997), pp. 279-289.
    by DA Petrov, DL Hartl
    posted to drosophila genome_architecture genome_size indels by dpollard on 2007-11-14 20:57:45 as ** along with 1 person and 1 group klo EisenLab
  • High intrinsic rate of DNA loss in Drosophila.
    Nature, Vol. 384, No. 6607. (28 November 1996), pp. 346-349.
    by DA Petrov, ER Lozovskaya, DL Hartl
    posted to drosophila genome_architecture genome_size indels by dpollard on 2007-11-14 20:55:15 as ** along with 3 people and 1 group skumagai timflutre urgi EisenLab
  • Similar Levels of X-linked and Autosomal Nucleotide Variation in African and non-African populations of Drosophila melanogaster
    BMC Evolutionary Biology, Vol. 7 (25 October 2007), 202.
    by Nadia D Singh, Michael J Macpherson, Jeffrey D Jensen, Dmitri A Petrov
    posted to drosophila polymorphism population_genetics population_structure by dpollard on 2007-11-14 20:37:17 as *** along with 1 person and 1 group PetrovLab EisenLab
  • A logical analysis of the Drosophila gap-gene system.
    J Theor Biol, Vol. 211, No. 2. (21 July 2001), pp. 115-141.
    by L Sánchez, D Thieffry
    posted to cis_regulatory_elements drosophila embryonic_patterning expression_pattern modeling by dpollard on 2007-11-05 21:22:06 as ** along with 2 people and 2 groups bayesian adepace EisenLab UH - Computational Biology
  • From gradients to stripes in Drosophila embryogenesis: filling in the gaps
    Trends in Genetics, Vol. 12, No. 11. (November 1996), pp. 478-483.
    by Rolando Rivera-Pomar, Herbert Jackle
    posted to cis_regulatory_elements drosophila embryonic_patterning expression_pattern modeling by dpollard on 2007-11-05 21:21:07 as ** along with 1 group EisenLab
  • Gradients and thresholds: BMP response gradients unveiled in Drosophila embryos
    Trends in Genetics, Vol. 19, No. 12. (December 2003), pp. 701-708.
    by Laurel A Raftery, David J Sutherland
    posted to cis_regulatory_elements drosophila embryonic_patterning expression_pattern modeling by dpollard on 2007-11-05 21:19:38 as ** along with 1 group EisenLab
  • Distance preferences in the arrangement of binding motifs and hierarchical levels in organization of transcription regulatory information.
    Nucleic Acids Res, Vol. 31, No. 20. (15 October 2003), pp. 6016-6026.
    by VJ Makeev, AP Lifanov, AG Nazina, DA Papatsenko
    posted to binding_site cis_regulatory_elements drosophila grammar helical_phasing by dpollard on 2007-10-31 22:40:43 as read along with 2 people and 2 groups oannes lusk EisenLab Regulomics_UCHSC
  • Making connections: boundaries and insulators in Drosophila.
    Curr Opin Genet Dev (26 September 2007)
    by Robert K K Maeda, François Karch
    posted to chromatin chromatin_modification cis_regulatory_elements drosophila insulators by dpollard on 2007-10-25 02:15:41 as ** along with 1 person and 1 group dchughes EisenLab
  • Temporal ChIP-on-chip reveals Biniou as a universal regulator of the visceral muscle transcriptional network.
    Genes Dev, Vol. 21, No. 19. (1 October 2007), pp. 2448-2460.
    by JS Jakobsen, M Braun, J Astorga, EH Gustafson, T Sandmann, M Karzynski, P Carlsson, EE Furlong
    posted to chip_chip drosophila by dpollard on 2007-10-25 02:13:01 as ** along with 1 person and 1 group Stew EisenLab
  • We gather together: insulators and genome organization.
    Curr Opin Genet Dev (1 October 2007)
    by Julie A A Wallace, Gary Felsenfeld
    posted to drosophila insulators by dpollard on 2007-10-25 02:00:08 as *** along with 3 people and 1 group dchughes sebastien_vigneau maximilianh EisenLab
  • Comparing active and repressed expression states of genes controlled by the Polycomb/Trithorax group proteins.
    Proc Natl Acad Sci U S A, Vol. 104, No. 42. (16 October 2007), pp. 16615-16620.
    by C Beisel, A Buness, IM Roustan-Espinosa, B Koch, S Schmitt, SA Haas, M Hild, T Katsuyama, R Paro
    posted to chip_chip chromatin_modification drosophila transcription by dpollard on 2007-10-25 01:52:45 as ** along with 1 group EisenLab
  • CAF-1 is essential for Drosophila development and involved in the maintenance of epigenetic memory.
    Dev Biol, Vol. 311, No. 1. (1 November 2007), pp. 213-222.
    by Y Song, F He, G Xie, X Guo, Y Xu, Y Chen, X Liang, I Stagljar, D Egli, J Ma, R Jiao
    posted to chromatin development drosophila by dpollard on 2007-10-25 01:37:16 as ** along with 1 group EisenLab
  • X Chromosome Inactivation during Drosophila Spermatogenesis.
    PLoS Biol, Vol. 5, No. 10. (9 October 2007)
    by Winfried Hense, John F F Baines, John Parsch
    posted to drosophila x_inactivation by dpollard on 2007-10-25 01:13:13 as ** along with 1 group EisenLab
  • The gap gene system of Drosophila melanogaster: Model-fitting and validation.
    Ann N Y Acad Sci (12 October 2007)
    by Theodore J J Perkins
    posted to drosophila embryonic_patterning modeling regulatory_network by dpollard on 2007-10-25 01:09:03 as ** along with 1 group EisenLab
  • Global Analysis of mRNA Localization Reveals a Prominent Role in Organizing Cellular Architecture and Function
    Cell, Vol. 131, No. 1. (5 October 2007), pp. 174-187.
    by Eric Lecuyer, Hideki Yoshida, Neela Parthasarathy, Christina Alm, Tomas Babak, Tanja Cerovina, Timothy R Hughes, Pavel Tomancak, Henry M Krause
    posted to drosophila gene_expression in_situ by dpollard on 2007-10-19 23:10:47 as *** along with 2 people and 1 group wrowell oelemento EisenLab
  • Biological function of unannotated transcription during the early development of Drosophila melanogaster
    Nature Genetics, Vol. 38, No. 10. (03 September 2006), pp. 1151-1158.
    by Robert J Manak, Sujit Dike, Victor Sementchenko, Philipp Kapranov, Frederic Biemar, Jeff Long, Jill Cheng, Ian Bell, Srinka Ghosh, Antonio Piccolboni, Thomas R Gingeras
    posted to array drosophila noncoding_transcription by dpollard on 2007-07-13 06:13:53 as read along with 5 people and 6 groups neveaire djkt wrowell Stew xingxu Biostatistics Computational-Genomics Bioinformatics EisenLab Neuroscience Cline_lab
  • Large-scale analysis of transcriptional cis-regulatory modules reveals both common features and distinct subclasses
    Genome Biology, Vol. 8 (05 June 2007), R101.
    by Long Li, Qianqian Zhu, Xin He, Saurabh Sinha, Marc S Halfon
    posted to angela_presented cis_regulatory_elements crm drosophila eisen_journal_club enhancer regulatory_sequence_evolution round_robin by dpollard on 2007-07-02 21:12:58 as *** along with 4 people and 1 group isimpson lusk cjeans maximilianh EisenLab
  • PIF-like Transposons Are Common in Drosophila and Have Been Repeatedly Domesticated to Generate New Host Genes.
    Mol Biol Evol (7 June 2007)
    by Claudio Casola, A Michelle M Lawing, Esther Betrán, Cédric Feschotte
    posted to domestication drosophila te transposable_elements by dpollard on 2007-06-29 05:51:44 as ** along with 1 person and 3 groups dchughes EisenLab G4ID Genetics-of-Gambling
  • Life cycle transcriptome of the malaria mosquito Anopheles gambiae and comparison with the fruitfly Drosophila melanogaster
    PNAS (11 June 2007), 0703988104.
    by Anastasios C Koutsos, Claudia Blass, Stephan Meister, Sabine Schmidt, Robert M Maccallum, Marcelo B Soares, Frank H Collins, Vladimir Benes, Evgeny Zdobnov, Fotis C Kafatos, George K Christophides
    posted to array dan_presented drosophila eisen_journal_club expression_divergence insect rate regulatory_evolution round_robin by dpollard on 2007-06-29 05:48:18 as *** along with 2 people and 1 group cjeans george_g EisenLab
  • New candidate genes for sex comb divergence between Drosophila mauritiana and Drosophila simulans.
    Genetics (11 June 2007)
    by Rita M M Graze, Olga Barmina, Daniel Tufts, Elena Naderi, Kristy L L Harmon, Maria Persianinova, Sergey V V Nuzhdin
    posted to drosophila qtl te by dpollard on 2007-06-29 05:45:38 as ** along with 1 group EisenLab
  • Genetics of incipient speciation in Drosophila mojavensis. I. Male courtship song, mating success, and genotype x environment interactions.
    Evolution Int J Org Evolution, Vol. 61, No. 5. (May 2007), pp. 1106-1119.
    by WJ Etges, CC de Oliveira, E Gragg, D Ortíz-Barrientos, MA Noor, MG Ritchie
    posted to drosophila environment qtl speciation by dpollard on 2007-06-14 23:23:33 as ** along with 1 person and 1 group darbuthnott EisenLab
  • Research on the karyotype and evolution of Drosophila melanogaster species group.
    J Genet Genomics, Vol. 34, No. 3. (March 2007), pp. 196-213.
    by Q Deng, Q Zeng, Y Qian, C Li, Y Yang
    posted to drosophila karyotype phylogeny by dpollard on 2007-06-13 22:27:37 as *** along with 1 group EisenLab
  • The stars and stripes of animal bodies: evolution of regulatory elements mediating pigment and bristle patterns in Drosophila.
    Trends Genet (10 May 2007)
    by Pat Simpson
    posted to cis_regulatory_elements drosophila morphological_evolution review by dpollard on 2007-06-13 22:25:39 as ** along with 1 group EisenLab
  • Computational annotation of transcription factor binding sites in D. Melanogaster developmental genes.
    Genome Inform, Vol. 17, No. 2. (2006), pp. 14-24.
    by V Narang, WK Sung, A Mittal
    posted to binding_site cis_regulatory_elements crm drosophila prediction by dpollard on 2007-06-13 22:20:42 as *** along with 1 group EisenLab
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/user/dpollard/tag/drosophila

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