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csdhwang library [30 articles]

最近 csdhwang さんのライブラリ .
  • Transcription regulatory region analysis using signal detection and fuzzy clustering
    Bioinformatics, Vol. 14, No. 3. (1 April 1998), pp. 244-251.
    by L Pickert, I Reuter, F Klawonn, E Wingender
    posted to no-tag by csdhwang on 2008-04-02 11:44:20 as **
  • Protein motif extraction with neuro-fuzzy optimization
    Bioinformatics, Vol. 18, No. 8. (1 August 2002), pp. 1084-1090.
    by Bill C Chang, Saman K Halgamuge
    posted to no-tag by csdhwang on 2008-04-02 11:37:25 as *****
  • Improved K-means clustering algorithm for exploring local protein sequence motifs representing common structural property
    NanoBioscience, IEEE Transactions on, Vol. 4, No. 3. (Sept. 2005), pp. 255-265.
    by Wei Zhong, G Altun, R Harrison, PC Tai, Yi Pan
    posted to no-tag by csdhwang on 2008-03-28 09:51:21 as ** along with 1 group Motif Discovery
  • Motif discoveries in unaligned molecular sequences using self-organizing neural networks
    Neural Networks, IEEE Transactions on, Vol. 17, No. 4. (July 2006), pp. 919-928.
    by Derong Liu, Xiaoxu Xiong, B Dasgupta, Huaguang Zhang
    posted to no-tag by csdhwang on 2008-03-28 09:50:42 as ** along with 1 group Motif Discovery
  • Regulatory motif discovery using a population clustering evolutionary algorithm.
    IEEE/ACM Trans Comput Biol Bioinform, Vol. 4, No. 3. (2007), pp. 403-414.
    by MA Lones, AM Tyrrell
    posted to no-tag by csdhwang on 2008-03-28 09:49:23 as ** along with 1 group Motif Discovery
  • fdrMotif: Identifying cis-elements by an EM Algorithm Coupled with False Discovery Rate Control.
    Bioinformatics (22 February 2008)
    by Leping Li, Robert L L Bass, Yu Liang
    posted to no-tag by csdhwang on 2008-03-28 09:46:31 as ** along with 3 people isimpson maximilianh idonaldson
  • Fast and Practical Algorithms for Planted (l, d) Motif Search.
    IEEE/ACM Trans Comput Biol Bioinform, Vol. 4, No. 4. (r 2007), pp. 544-552.
    by Jaime Davila, Sudha Balla, Sanguthevar Rajasekaran
    posted to no-tag by csdhwang on 2008-03-28 09:46:08 as ** along with 1 person maximilianh
  • CoMoDis: composite motif discovery in mammalian genomes.
    Nucleic Acids Res, Vol. 35, No. 1. (2007)
    by IJ Donaldson, B Göttgens
    posted to no-tag by csdhwang on 2008-03-28 09:45:47 as ** along with 1 person and 1 group idonaldson Bioinformatics
  • Regulatory motif discovery using a population clustering evolutionary algorithm.
    IEEE/ACM Trans Comput Biol Bioinform, Vol. 4, No. 3. (p 2007), pp. 403-414.
    by MA Lones, AM Tyrrell
    posted to no-tag by csdhwang on 2008-03-28 09:44:03 as ** along with 4 people isimpson nklee idonaldson xili03
  • A survey of motif discovery methods in an integrated framework
    Biology Direct, Vol. 1, No. 1. (06 April 2006), 11.
    by Geir K Sandve, Finn Drabløs
    posted to no-tag by csdhwang on 2008-03-28 09:43:24 as ** along with 5 people and 1 group idonaldson aprasad dpollard samal yevishere EisenLab
  • Analysis of computational approaches for motif discovery
    Algorithms for Molecular Biology, Vol. 1, No. 1. (19 May 2006), 8.
    by Nan Li, Martin Tompa
    posted to no-tag by csdhwang on 2008-03-28 09:42:26 as ** along with 9 people and 2 groups ana barry tuck chad_davis dquest lusk nklee maximilianh xi03 structural_bioinformatics Bioinformatics
  • Advances in the Discovery of cis-Regulatory Elements
    Current Bioinformatics, Vol. 1, No. 3. (August 2006), pp. 321-336.
    by Pan, Youlian
    posted to no-tag by csdhwang on 2008-03-28 09:38:47 as ** along with 1 person nklee
  • Position and distance specificity are important determinants of cis-regulatory motifs in addition to evolutionary conservation
    Nucl. Acids Res., Vol. 35, No. 10. (11 May 2007), pp. 3203-3213.
    by Saran Vardhanabhuti, Junwen Wang, Sridhar Hannenhalli
    posted to no-tag by csdhwang on 2008-03-28 09:37:18 as ** along with 3 people nuin cjeans ankur_iitg
  • Discovery of Regulatory Elements by a Computational Method for Phylogenetic Footprinting
    Genome Res., Vol. 12, No. 5. (1 May 2002), pp. 739-748.
    by Mathieu Blanchette, Martin Tompa
    posted to no-tag by csdhwang on 2008-03-28 09:36:29 as ** along with 5 people and 2 groups chad_davis balajis lyongu dpollard dquest EisenLab cis-regulatory-evolution
  • Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome.
    Proc Natl Acad Sci U S A, Vol. 99, No. 2. (22 January 2002), pp. 757-762.
    by BP Berman, Y Nibu, BD Pfeiffer, P Tomancak, SE Celniker, M Levine, GM Rubin, MB Eisen
    posted to no-tag by csdhwang on 2008-03-28 09:35:22 as ** along with 3 people and 1 group indigoviolet Stew emptyhb EisenLab
  • Computational detection of genomic cis-regulatory modules applied to body patterning in the early Drosophila embryo.
    BMC Bioinformatics, Vol. 3 (24 October 2002)
    by N Rajewsky, M Vergassola, U Gaul, ED Siggia
    posted to no-tag by csdhwang on 2008-03-28 09:34:20 as ** along with 5 people and 1 group ansobol indigoviolet adepace koller Stew EisenLab
  • Finding cis-regulatory modules in Drosophila using phylogenetic hidden Markov models
    Bioinformatics, Vol. 23, No. 16. (15 August 2007), pp. 2031-2037.
    by Wendy S Wong, Rasmus Nielsen
    posted to no-tag by csdhwang on 2008-03-28 09:33:33 as ** along with 2 people and 1 group indigoviolet cabbagezs EisenLab
  • Identifying cis-regulatory modules by combining comparative and compositional analysis of DNA.
    Bioinformatics (10 October 2006)
    by Nora Pierstorff, Casey M M Bergman, Thomas Wiehe
    posted to no-tag by csdhwang on 2008-03-28 09:32:51 as ** along with 3 people and 1 group dpollard plofje SeungjoonOh EisenLab
  • Computation-Based Discovery of Cis-Regulatory Modules by Hidden Markov Model.
    J Comput Biol (11 March 2008)
    by Jing Wu, Jun Xie
    posted to no-tag by csdhwang on 2008-03-28 09:32:08 as ** along with 3 people and 1 group pradiptaray maximilianh cisevol BergmanLab
  • Stubb: a program for discovery and analysis of cis-regulatory modules.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006)
    by S Sinha, Y Liang, E Siggia
    posted to no-tag by csdhwang on 2008-03-28 09:31:18 as ** along with 2 people and 1 group indigoviolet Stew EisenLab
  • Computational discovery of cis-regulatory modules in Drosophila, without prior knowledge of motifs
    Genome Biology, Vol. 9, No. 1. (2008)
    by Andra Ivan, Marc Halfon, Saurabh Sinha
    posted to no-tag by csdhwang on 2008-03-28 09:30:51 as ** along with 2 people and 1 group maximilianh cisevol cis-regulatory-evolution
  • Computational technique for improvement of the position-weight matrices for the DNA/protein binding sites.
    Nucleic Acids Res, Vol. 33, No. 7. (2005), pp. 2290-2301.
    by NI Gershenzon, GD Stormo, IP Ioshikhes
    posted to no-tag by csdhwang on 2008-03-28 09:26:50 as ** along with 1 person Kiarostami
  • Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Victor Levitsky, Elena Ignatieva, Elena Ananko, Igor Turnaev, Tatyana Merkulova, Nikolay Kolchanov, T Hodgman
    posted to no-tag by csdhwang on 2008-03-28 09:17:19 as ** along with 4 people xili03 nklee maximilianh yevishere
  • Natural Similarity Measures between Position Frequency Matrices with an Application to Clustering.
    Bioinformatics (2 January 2008)
    by Utz J J Pape, Sven Rahmann, Martin Vingron
    posted to no-tag by csdhwang on 2008-03-28 09:14:28 as ** along with 4 people chad_davis nklee maximilianh mclarenv
  • TFBS Identification Based on Genetic Algorithm with Combined Representations and Adaptive Post-processing.
    Bioinformatics (6 December 2007)
    by Tak-Ming M Chan, Kwong-Sak S Leung, Kin-Hong H Lee
    posted to no-tag by csdhwang on 2008-03-28 09:13:41 as ** along with 5 people isimpson nklee maximilianh idonaldson xili03
  • Assessment of composite motif discovery methods
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Kjetil Klepper, Geir Sandve, Osman Abul, Jostein Johansen, Finn Drablos
    posted to no-tag by csdhwang on 2008-03-28 09:09:18 as ***** along with 6 people and 1 group isimpson chad_davis nklee maximilianh idonaldson xili03 Motif Discovery
  • A survey of DNA motif finding algorithms
    BMC Bioinformatics, Vol. 8, No. Suppl 7. (2007)
    by Modan Das, Ho K Dai
    posted to no-tag by csdhwang on 2008-03-28 09:08:03 as *** along with 6 people xili03 brant dquest nklee maximilianh yevishere
  • Mclip: motif detection based on cliques of gapped local profile-to-profile alignments
    Bioinformatics, Vol. 23, No. 4. (15 February 2007), pp. 502-503.
    by Frickey, Tancred, Weiller, Georg
    posted to no-tag by csdhwang on 2008-03-28 09:06:03 as ** along with 1 person GustavoLacerda
  • SPACER: identification of cis-regulatory elements with non-contiguous critical residues
    Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 1029-1031.
    by Chakravarty, Arijit, Carlson, M Jonathan, Khetani, S Radhika, Deziel, E Charles, Gross, H Robert
    posted to no-tag by csdhwang on 2008-03-28 09:00:06 as ** along with 1 person wenhan
  • [duplicate] Position dependencies in transcription factor binding sites
    Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 933-941.
    by Tomovic, Andrija, Oakeley, J Edward
    posted to no-tag by csdhwang on 2008-03-28 00:31:09 as **
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/user/csdhwang

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