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comb library [58 articles]

最近 comb さんのライブラリ .
  • A chemosensory system that regulates biofilm formation through modulation of cyclic diguanylate levels.
    Proc Natl Acad Sci U S A (26 September 2005)
    by Jason W W Hickman, Delia F F Tifrea, Caroline S S Harwood
    posted to biofilm pseudomonas by comb on 2006-06-23 11:02:00 as ***** along with 1 person rklancer
  • Evolutionary Analysis of the Two-Component Systems in Pseudomonas aeruginosa PAO1
    Journal of Molecular Evolution, Vol. 59, No. 6. (December 2004), pp. 725-737.
    by Chen, Ying-Tsong, Chang, Hwan, Lu, Chin, Peng, Hwei-Ling
    posted to biofilm pseudomonas two-component-signal-transduction by comb on 2006-06-23 11:00:42 as ***** along with 1 person LeightonP
  • REGULATORY CIRCUITS AND COMMUNICATION IN GRAM-NEGATIVE BACTERIA
    Nat Rev Micro, Vol. 2, No. 7. (July 2004), pp. 581-592.
    by Andree M Lazdunski, Isabelle Ventre, James N Sturgis
    posted to biofilm communication pseudomonas by comb on 2006-06-23 10:59:58 as ***** along with 2 people CareyNadell bakakaj
  • A Distinct QscR Regulon in the Pseudomonas aeruginosa Quorum-Sensing Circuit
    J. Bacteriol., Vol. 188, No. 9. (1 May 2006), pp. 3365-3370.
    by Yannick Lequette, Joon-Hee Lee, Fouzia Ledgham, Andree Lazdunski, Peter E Greenberg
    posted to biofilm pseudomonas by comb on 2006-06-23 10:58:29 as *****
  • A network of networks: Quorum-sensing gene regulation in Pseudomonas aeruginosa
    International Journal of Medical Microbiology, Vol. 296, No. 2-3. (6 April 2006), pp. 73-81.
    by Martin Schuster, Peter
    posted to biofilm pseudomonas by comb on 2006-06-23 10:57:29 as ***** along with 2 people CareyNadell bakakaj
  • Multiple sensors control reciprocal expression of Pseudomonas aeruginosa regulatory RNA and virulence genes.
    Proc Natl Acad Sci U S A, Vol. 103, No. 1. (3 January 2006), pp. 171-176.
    by I Ventre, AL Goodman, I Vallet-Gely, P Vasseur, C Soscia, S Molin, S Bleves, A Lazdunski, S Lory, A Filloux
    posted to biofilm pseudomonas by comb on 2006-06-23 10:54:46 as ***** along with 1 person textoris
  • The mechanism of cell differentiation in Bacillus subtilis
    Nature, Vol. 441, No. 7091., pp. 371-374.
    by Dagmar Iber, Joanna Clarkson, Michael D Yudkin, Iain D Campbell
    posted to no-tag by comb on 2006-05-18 09:08:56 as ***** along with 2 people jjray balabu
  • Structure and function of negative feedback loops at the interface of genetic and metabolic networks.
    Nucleic Acids Res, Vol. 34, No. 8. (2006), pp. 2455-2462.
    by S Krishna, AM Andersson, S Semsey, K Sneppen
    posted to no-tag by comb on 2006-05-16 13:43:08 as ***** along with 2 people alexg entropy
  • Network motifs are enriched with transcription factors whose transcripts have short half-lives.
    Trends Genet, Vol. 21, No. 9. (September 2005), pp. 492-495.
    by E Wang, E Purisima
    posted to motifs transcript by comb on 2006-05-09 14:39:20 as ** along with 1 person maralena
  • Micros for microbes: non-coding regulatory RNAs in bacteria.
    Trends Genet, Vol. 21, No. 7. (July 2005), pp. 399-404.
    by S Gottesman
    posted to e_coli rna by comb on 2006-05-09 13:54:30 as ** along with 8 people and 3 groups imouthesmp sglandt marcius balabu cdawson leemary4 saru ricardolds BioinfoCIPF SGU-CIPF GIG
  • Modular analysis of the transcriptional regulatory network of E. coli.
    Trends Genet, Vol. 21, No. 1. (January 2005), pp. 16-20.
    by O Resendis-Antonio, JA Freyre-González, R Menchaca-Méndez, RM Gutiérrez-Ríos, A Martínez-Antonio, C Avila-Sánchez, J Collado-Vides
    posted to modules trn by comb on 2006-05-09 13:52:07 as **
  • Gene expression patterns during swarming in Salmonella typhimurium: genes specific to surface growth and putative new motility and pathogenicity genes.
    Mol Microbiol, Vol. 52, No. 1. (April 2004), pp. 169-187.
    by Q Wang, JG Frye, M McClelland, RM Harshey
    posted to salmonella swarming by comb on 2006-05-09 13:46:36 as **
  • Cell cycle control in bacteria and yeast: a case of convergent evolution?
    Cell Cycle, Vol. 5, No. 5. (March 2006), pp. 522-529.
    by P Brazhnik, JJ Tyson
    posted to caulobacter cell_cycle yeast by comb on 2006-05-09 11:39:18 as **
  • Two-Component Signal Transduction Pathways Regulating Growth and Cell Cycle Progression in a Bacterium: A System-Level Analysis.
    PLoS Biol, Vol. 3, No. 10. (27 September 2005)
    by Jeffrey M M Skerker, Melanie S S Prasol, Barrett S S Perchuk, Emanuele G G Biondi, Michael T T Laub
    posted to caulobacter cell_cycle two-component-signal-transduction by comb on 2006-05-09 11:28:05 as *** along with 2 people bjorns balajis
  • Global analysis of a bacterial cell cycle: tracking down necessary functions and their regulators.
    Trends Microbiol, Vol. 9, No. 9. (September 2001), pp. 405-407.
    by YV Brun
    posted to caulobacter cell_cycle review by comb on 2006-05-09 11:18:52 as ****
  • Proteomic analysis of the Caulobacter crescentus stalk indicates competence for nutrient uptake.
    Mol Microbiol, Vol. 45, No. 4. (August 2002), pp. 1029-1041.
    by MM Ireland, JA Karty, EM Quardokus, JP Reilly, YV Brun
    posted to caulobacter differentiation proteome stalk by comb on 2006-05-09 11:12:01 as *****
  • Proteome of Caulobacter crescentus cell cycle publicly accessible on SWICZ server.
    Proteomics, Vol. 3, No. 10. (October 2003), pp. 1874-1882.
    by J Vohradsky, I Janda, B Grünenfelder, P Berndt, D Röder, H Langen, J Weiser, U Jenal
    posted to caulobacter cell_cycle proteome by comb on 2006-05-09 11:10:52 as *****
  • Proteomic analysis of the bacterial cell cycle.
    Proc Natl Acad Sci U S A, Vol. 98, No. 8. (10 April 2001), pp. 4681-4686.
    by B Grünenfelder, G Rummel, J Vohradsky, D Röder, H Langen, U Jenal
    posted to caulobacter cell_cycle proteome by comb on 2006-05-09 11:09:54 as *****
  • Phenotypic variation in bacteria: the role of feedback regulation
    Nature Reviews Microbiology, Vol. 4, No. 4., pp. 259-271.
    by Wiep K Smits, Oscar P Kuipers, Jan-Willem Veening
    posted to no-tag by comb on 2006-04-25 16:59:36 as ***** along with 4 people and 1 group madhadron nickluscombe timflutre margaritis EBI-regulation
  • Transcriptional program of early sporulation and stationary-phase events in Clostridium acetobutylicum.
    J Bacteriol, Vol. 187, No. 20. (October 2005), pp. 7103-7118.
    by KV Alsaker, ET Papoutsakis
    posted to clostridium sporulation by comb on 2006-04-13 17:18:29 as **
  • Genes for small, noncoding RNAs under sporulation control in Bacillus subtilis.
    J Bacteriol, Vol. 188, No. 2. (January 2006), pp. 532-541.
    by JM Silvaggi, JB Perkins, R Losick
    posted to bacillus non_coding_rna sporulation by comb on 2006-04-13 17:18:16 as **
  • A master regulator sigmaB governs osmotic and oxidative response as well as differentiation via a network of sigma factors in Streptomyces coelicolor
    Molecular Microbiology, Vol. 57, No. 5. (September 2005), pp. 1252-1264.
    by Eun-Jin Lee, Nitsara Karoonuthaisiri, Hyo-Sub Kim, Joo-Hong Park, Chang-Jun Cha, Camilla M Kao, Jung-Hye Roe
    posted to differentiation streptomyces by comb on 2006-04-13 17:17:03 as ****
  • A Bacterial Cell-Cycle Regulatory Network Operating in Time and Space
    Science, Vol. 301, No. 5641. (26 September 2003), pp. 1874-1877.
    by Harley H Mcadams, Lucy Shapiro
    posted to caulobacter cell_cycle time_space by comb on 2006-04-13 17:16:05 as ***** along with 5 people and 1 group balajis nickluscombe lshaw fishtank dylan77 EBI-regulation
  • Oscillating Global Regulators Control the Genetic Circuit Driving a Bacterial Cell Cycle
    Science, Vol. 304, No. 5673. (14 May 2004), pp. 983-987.
    by Julia Holtzendorff, Dean Hung, Peter Brende, Ann Reisenauer, Patrick H Viollier, Harley H Mcadams, Lucy Shapiro
    posted to caulobacter cell_cycle oscillating_regulators by comb on 2006-04-13 17:14:57 as ***** along with 1 person balajis
  • Environmental conditions and transcriptional regulation in Escherichia coli: a physiological integrative approach.
    Biotechnol Bioeng, Vol. 84, No. 7. (30 December 2003), pp. 743-749.
    by A Martínez-Antonio, H Salgado, S Gama-Castro, RM Gutiérrez-Ríos, V Jiménez-Jacinto, J Collado-Vides
    posted to e_coli environment response transcription by comb on 2006-04-13 12:44:42 as ****
  • Transcriptional response of Escherichia coli to temperature shift.
    Biotechnol Prog, Vol. 21, No. 3. (n 2005), pp. 689-699.
    by M Gadgil, V Kapur, WS Hu
    posted to no-tag by comb on 2006-04-13 12:43:57 as *****
  • Genomic analysis of regulatory network dynamics reveals large topological changes.
    Nature, Vol. 431, No. 7006. (16 September 2004), pp. 308-312.
    by NM Luscombe, MM Babu, H Yu, M Snyder, SA Teichmann, M Gerstein
    posted to no-tag by comb on 2006-04-13 12:43:26 as ***** along with 20 people and 6 groups carlk faion camster snuppepuppan hununu icases lna lfriedl alexg nirfriedman dgront nickluscombe kairita kengg gespim koller timflutre fishtank cjeans rebeccamancy dbk-lab kdl EBI-regulation TNT ColDyn Plantandetc
  • Genomic transcriptional response to loss of chromosomal supercoiling in Escherichia coli.
    Genome Biol, Vol. 5, No. 11. (2004)
    by BJ Peter, J Arsuaga, AM Breier, AB Khodursky, PO Brown, NR Cozzarelli
    posted to no-tag by comb on 2006-04-13 12:42:40 as ***** along with 1 person supercoiling
  • Design principles of a bacterial signalling network
    Nature, Vol. 438, No. 7067., pp. 504-507.
    by Markus Kollmann, Linda Løvdok, Kilian Bartholomé, Jens Timmer, Victor Sourjik
    posted to no-tag by comb on 2006-04-13 12:41:50 as ***** along with 13 people rklancer abhik monod chrn jmeppley jjray bayesian alexg ryang balicea wnpx balabu entropy
  • Genome-wide analyses of Escherichia coli gene expression responsive to the BaeSR two-component regulatory system.
    J Bacteriol, Vol. 187, No. 5. (March 2005), pp. 1763-1772.
    by K Nishino, T Honda, A Yamaguchi
    posted to no-tag by comb on 2006-04-13 12:41:15 as **
  • Sensing external stress: watchdogs of the Escherichia coli cell envelope.
    Curr Opin Microbiol, Vol. 8, No. 2. (April 2005), pp. 122-126.
    by N Ruiz, TJ Silhavy
    posted to no-tag by comb on 2006-04-13 12:40:28 as ****
  • Global transcriptional programs reveal a carbon source foraging strategy by Escherichia coli.
    J Biol Chem, Vol. 280, No. 16. (22 April 2005), pp. 15921-15927.
    by M Liu, T Durfee, JE Cabrera, K Zhao, DJ Jin, FR Blattner
    posted to no-tag by comb on 2006-04-13 12:39:54 as ****
  • Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: assessment of correlated reaction subsets that comprise network states.
    Genome Res, Vol. 14, No. 9. (September 2004), pp. 1797-1805.
    by JL Reed, BØ Palsson
    posted to no-tag by comb on 2006-04-13 12:35:56 as **** along with 1 person lylu
  • Conserved modular design of an oxygen sensory/signaling network with species-specific output.
    Proc Natl Acad Sci U S A, Vol. 102, No. 22. (31 May 2005), pp. 8018-8023.
    by S Crosson, PT McGrath, C Stephens, HH McAdams, L Shapiro
    posted to caulobacter signalling-network by comb on 2006-04-13 12:34:40 as *****
  • Topological units of environmental signal processing in the transcriptional regulatory network of Escherichia coli.
    Proc Natl Acad Sci U S A, Vol. 102, No. 22. (31 May 2005), pp. 7841-7846.
    by G Balázsi, AL Barabási, ZN Oltvai
    posted to no-tag by comb on 2006-04-12 09:38:57 as ***** along with 1 person aswin
  • An excitable gene regulatory circuit induces transient cellular differentiation
    Nature, Vol. 440, No. 7083., pp. 545-550.
    by Gã¼rol M Sã¼el, Jordi Garcia-Ojalvo, Louisa M Liberman, Michael B Elowitz
    posted to no-tag by comb on 2006-04-06 12:43:47 as ***** along with 10 people and 1 group rklancer jjray alexg madhadron balabu nickluscombe dbikard mhucka margaritis paurue EBI-regulation
  • PLoS Biology: Two-Component Signal Transduction Pathways Regulating Growth and Cell Cycle Progression in a Bacterium: A System-Level Analysis
    posted to no-tag by comb on 2006-04-03 17:10:42 as *****
  • Quorum sensing as an integral component of gene regulatory networks in Gram-negative bacteria
    Current Opinion in Microbiology, Vol. 4, No. 2. (1 April 2001), pp. 186-193.
    by Helen Withers, Simon Swift, Paul Williams
    posted to no-tag by comb on 2006-04-03 17:10:32 as *****
  • Functional and comparative genomics of pathogenic bacteria
    Current Opinion in Microbiology, Vol. 5, No. 1. (1 February 2002), pp. 20-26.
    by Gary K Schoolnik
    posted to no-tag by comb on 2006-04-03 17:10:27 as *****
  • Regulation of type III secretion systems
    Current Opinion in Microbiology, Vol. 5, No. 2. (1 April 2002), pp. 166-172.
    by Matthew S Francis, Hans Wolf-Watz, Ake Forsberg
    posted to no-tag by comb on 2006-04-03 17:10:04 as **
  • The incoherent feed-forward loop accelerates the response-time of the gal system of Escherichia coli.
    J Mol Biol, Vol. 356, No. 5. (10 March 2006), pp. 1073-1081.
    by S Mangan, S Itzkovitz, A Zaslaver, U Alon
    posted to no-tag by comb on 2006-04-03 17:09:34 as ** along with 1 person balabu
  • In silico design and adaptive evolution of Escherichia coli for production of lactic acid.
    Biotechnol Bioeng, Vol. 91, No. 5. (5 September 2005), pp. 643-648.
    by SS Fong, AP Burgard, CD Herring, EM Knight, FR Blattner, CD Maranas, BO Palsson
    posted to no-tag by comb on 2006-04-03 17:09:23 as **
  • Internal-sensing machinery directs the activity of the regulatory network in Escherichia coli.
    Trends Microbiol, Vol. 14, No. 1. (January 2006), pp. 22-27.
    by A Martínez-Antonio, SC Janga, H Salgado, J Collado-Vides
    posted to no-tag by comb on 2006-04-03 17:09:08 as ***** along with 1 person and 1 group nickluscombe EBI-regulation
  • Transition to Quorum Sensing in an Agrobacterium Population: A Stochastic Model.
    PLoS Comput Biol, Vol. 1, No. 4. (16 September 2005)
    by Andrew B B Goryachev, Da-Jun J Toh, Keng Boon B Wee, Travis Lee, Hai-Bao B Zhang, Lian-Hui H Zhang
    posted to no-tag by comb on 2006-04-03 17:05:26 as ***** along with 1 person rklancer
  • The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states.
    Proc Natl Acad Sci U S A, Vol. 102, No. 52. (27 December 2005), pp. 19103-19108.
    by CL Barrett, CD Herring, JL Reed, BO Palsson
    posted to no-tag by comb on 2006-04-03 17:04:01 as ** along with 3 people heliopais alexg madhadron
  • PLoS Biology: Design and Diversity in Bacterial Chemotaxis: A Comparative Study in Escherichia coli and Bacillus subtilis
    posted to no-tag by comb on 2006-04-03 16:59:53 as **
  • Identifying global regulators in transcriptional regulatory networks in bacteria
    Current Opinion in Microbiology, Vol. 6, No. 5. (October 2003), pp. 482-489.
    by Agustino Martinez-Antonio, Julio Collado-Vides
    posted to no-tag by comb on 2006-04-03 16:59:42 as **** along with 2 people discreteonyxorb karfunkel
  • Analysis of regulatory networks in Pseudomonas aeruginosa by genomewide transcriptional profiling
    Current Opinion in Microbiology, Vol. 7, No. 1. (February 2004), pp. 39-44.
    by Andrew L Goodman, Stephen Lory
    posted to no-tag by comb on 2006-04-03 16:58:35 as ** along with 1 person bakakaj
  • Protein interaction networks in bacteria
    Current Opinion in Microbiology, Vol. 7, No. 5. (October 2004), pp. 505-512.
    by Philippe Noirot, Marie-Francoise Noirot-Gros
    posted to no-tag by comb on 2006-04-03 16:54:09 as *** along with 1 person entropy
  • Regulatory links between carbon and nitrogen metabolism
    Current Opinion in Microbiology, Vol. 9, No. 2. (April 2006), pp. 167-172.
    by Fabian M Commichau, Karl Forchhammer, Jorg Stulke
    posted to no-tag by comb on 2006-04-03 16:50:16 as **** along with 1 person tny
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