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blobbybirdman bioinformatics [18 articles]

最近 blobbybirdman さんのライブラリに追加された論文の中から タグ bioinformatics. You can also see everyone's bioinformatics.
  • Non-additivity in protein-DNA binding.
    Bioinformatics, Vol. 21, No. 10. (15 May 2005), pp. 2254-2263.
    by RA O'Flanagan, G Paillard, R Lavery, AM Sengupta
    posted to binding-site-prediction bioinformatics svm by blobbybirdman on 2008-01-24 20:09:14 as *** along with 2 people and 1 group reidy nklee UH - Computational Biology
  • Mining of putative cis-acting elements for chromatin mediated regulation of Hox genes in mammals by in-silico analysis.
    J Exp Zoolog B Mol Dev Evol (14 March 2007)
    by Hemant Bengani, Mythily Ganapathi, Gajinder Pal P Singh, Vani Brahmachari
    posted to bioinformatics chromatin gene-regulation hox sequence-analysis by blobbybirdman on 2008-01-24 19:58:16 as *** along with 1 person and 1 group dpollard EisenLab
  • Chipper: discovering transcription-factor targets from chromatin immunoprecipitation microarrays using variance stabilization
    Genome Biology, Vol. 6, No. 11. (2005)
    by Francis Gibbons, Markus Proft, Kevin Struhl, Frederick Roth
    posted to bioinformatics chip cis-regulatory-elements by blobbybirdman on 2008-01-17 20:39:54 as ** along with 1 group Myxo group
  • A Computational Pipeline for High- Throughput Discovery of cis-Regulatory Noncoding RNA in Prokaryotes
    PLoS Computational Biology, Vol. 3, No. 7. (1 July 2007), e126.
    by Zizhen Yao, Jeffrey Barrick, Zasha Weinberg, Shane Neph, Ronald Breaker, Martin Tompa, Walter L Ruzzo
    posted to algorithms bioinformatics genomics mirna prokaryotes by blobbybirdman on 2007-10-16 19:42:47 as **** along with 4 people sebastien_vigneau zwang lp2 cabbagezs
  • Bayesian methods in bioinformatics and computational systems biology.
    Brief Bioinform (12 April 2007)
    by Darren J J Wilkinson
    posted to bayesian-statistics bioinformatics computational-biology systems-biology by blobbybirdman on 2007-10-09 18:27:25 as *** along with 14 people and 1 group jyuh Borelli jfr wnpx neveaire zwang bertelsen cabbagezs julesyoo hpaces vietanh0 waszak i-stevenson quianominorleo Bioinformatics
  • Applied bioinformatics for the identification of regulatory elements
    Nat Rev Genet, Vol. 5, No. 4. (2004), pp. 276-87.
    by WW Wasserman, A Sandelin
    posted to binding-site-prediction bioinformatics cis-regulatory-elements review by blobbybirdman on 2007-10-09 17:56:40 as read along with 1 group UH - Computational Biology
  • In silico identification of metazoan transcriptional regulatory regions
    Naturwissenschaften, Vol. 90, No. 4. (2003), pp. 156-66.
    by WW Wasserman, W Krivan
    posted to binding-site-prediction bioinformatics review by blobbybirdman on 2007-10-09 17:56:40 as ***
  • Lecture Notes on Biological Sequence Analysis
    No. 2000-06-01. (2000)
    by M Tompa
    posted to binding-site-prediction bioinformatics review sequence-analysis by blobbybirdman on 2007-10-09 17:56:38 as read
  • Identification of common molecular subsequences
    J Mol Biol, Vol. 147, No. 1. (1981), pp. 195-7.
    by TF Smith, MS Waterman
    posted to algorithms bioinformatics sequence-alignment by blobbybirdman on 2007-10-09 17:56:35 as ***
  • Discovery of novel transcription factor binding sites by statistical overrepresentation
    Nucleic Acids Res, Vol. 30, No. 24. (2002), pp. 5549-60.
    by S Sinha, M Tompa
    posted to algorithms binding-site-predictions bioinformatics expression-clustering s_cerevisiae by blobbybirdman on 2007-10-09 17:56:35 as ****
  • YMF: A program for discovery of novel transcription factor binding sites by statistical overrepresentation
    Nucleic Acids Res, Vol. 31, No. 13. (2003), pp. 3586-8.
    by S Sinha, M Tompa
    posted to algorithms binding-site-predictions bioinformatics expression-clustering by blobbybirdman on 2007-10-09 17:56:35 as **
  • PhyME: a probabilistic algorithm for finding motifs in sets of orthologous sequences
    BMC Bioinformatics, Vol. 5 (2004)
    by S Sinha, M Blanchette, M Tompa
    posted to algorithms binding-site-predictions bioinformatics drosophila evolutionary-comparisons expression-clustering h_sapiens s_cerevisiae statistical by blobbybirdman on 2007-10-09 17:56:35 as ****
  • CREME: a framework for identifying cis-regulatory modules in human-mouse conserved segments
    Bioinformatics, Vol. 19 Suppl 1 (2003), pp. i283-91.
    by R Sharan, I Ovcharenko, Ben A Hur, RM Karp
    posted to algorithms binding-site-prediction bioinformatics clustering h_sapiens modularity mouse by blobbybirdman on 2007-10-09 17:56:35 as ***
  • CREME: Cis-Regulatory Module Explorer for the human genome
    Nucleic Acids Res, Vol. 32, No. Web Server issue. (2004), pp. W253-6.
    by R Sharan, Ben A Hur, GG Loots, I Ovcharenko
    posted to algorithms binding-site-prediction bioinformatics clustering h_sapiens modularity mouse by blobbybirdman on 2007-10-09 17:56:35 as **
  • MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences
    Nucleic Acids Res, Vol. 31, No. 13. (2003), pp. 3518-24.
    by S Schwartz, L Elnitski, M Li, M Weirauch, C Riemer, A Smit, ED Green, RC Hardison, W Miller
    posted to algorithms binding-site-predictions bioinformatics evolutionary-comparisons multiple-alignment by blobbybirdman on 2007-10-09 17:56:35 as ***
  • Sequence logos: a new way to display consensus sequences
    Nucleic Acids Res, Vol. 18, No. 20. (1990), pp. 6097-100.
    by TD Schneider, RM Stephens
    posted to binding-site-prediction bioinformatics computational-tools dna-binding information-theory by blobbybirdman on 2007-10-09 17:56:35 as read
  • Discovering novel cis-regulatory motifs using functional networks
    Genome Res, Vol. 13, No. 5. (2003), pp. 883-95.
    by LM Ettwiller, J Rung, E Birney
    posted to algorithms binding-site-prediction bioinformatics networks by blobbybirdman on 2007-10-09 17:56:18 as ***
  • Organise your bioinformatics projects using Subversion and Trac: part 1 « What You’re Doing Is Rather Desperate
    by Nw Saunders
    posted to bioinformatics software-tools by blobbybirdman on 2007-10-09 17:34:44 as ** along with 1 person stajich
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