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bakakaj library [290 articles]

最近 bakakaj さんのライブラリ (優先度順).
  • Comparison of amplification methods for transcriptomic analyses of low abundance prokaryotic RNA sources.
    J Microbiol Methods, Vol. 68, No. 2. (February 2007), pp. 385-391.
    by P Francois, C Garzoni, M Bento, J Schrenzel
    posted to amplification rna by bakakaj on 2008-02-18 10:26:31 as ***** along with 1 person jyuh
  • Functional characterization of the gene PA2384 in large-scale gene regulation in response to iron starvation in Pseudomonas aeruginosa.
    J Biotechnol, Vol. 132, No. 4. (1 December 2007), pp. 342-352.
    by P Zheng, J Sun, R Geffers, AP Zeng
    posted to aeruginosa iron transcriptomics by bakakaj on 2008-02-18 16:35:14 as ****
  • High-affinity Zn2+ uptake system ZnuABC is required for bacterial zinc homeostasis in intracellular environments and contributes to the virulence of Salmonella enterica.
    Infect Immun, Vol. 75, No. 12. (December 2007), pp. 5867-5876.
    by S Ammendola, P Pasquali, C Pistoia, P Petrucci, P Petrarca, G Rotilio, A Battistoni
    posted to salmonella zinc by bakakaj on 2008-02-07 12:31:23 as ****
  • Bacterial zinc uptake and regulators
    Current Opinion in Microbiology, Vol. 8, No. 2. (April 2005), pp. 196-202.
    by Klaus Hantke
    posted to zinc review by bakakaj on 2008-02-08 09:54:51 as ***
  • Femtomolar Sensitivity of Metalloregulatory Proteins Controlling Zinc Homeostasis
    Science, Vol. 292, No. 5526. (29 June 2001), pp. 2488-2492.
    by Caryn E Outten, Thomas V O'Halloran
    posted to zinc by bakakaj on 2008-02-07 17:25:39 as ***
  • Bioconductor: open software development for computational biology and bioinformatics.
    Genome Biol, Vol. 5, No. 10. (2004)
    by RC Gentleman, VJ Carey, DM Bates, B Bolstad, M Dettling, S Dudoit, B Ellis, L Gautier, Y Ge, J Gentry, K Hornik, T Hothorn, W Huber, S Iacus, R Irizarry, F Leisch, C Li, M Maechler, AJ Rossini, G Sawitzki, C Smith, G Smyth, L Tierney, JY Yang, J Zhang
    posted to statistics bioconductor by bakakaj on 2008-07-21 17:05:51 as ** along with 13 people and 1 group bertelsen zhouyu gupton Dax42 pcahan1 balajis dullhunk giovanni incovoma talponer medha1 wirawan joule GeschwindLab
  • Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue
    BMC Bioinformatics, Vol. 8 (22 May 2007), 165.
    by Marc Strickert, Nese Sreenivasulu, Bjorn Usadel, Udo Seiffert
    posted to statistics mds by bakakaj on 2008-07-21 14:26:26 as **
  • Multidimensional scaling for large genomic data sets
    BMC Bioinformatics, Vol. 9 (04 April 2008), 179.
    by Jengnan Tzeng, Henry H Lu, Wen-Hsiung Li
    posted to statistics mds by bakakaj on 2008-07-21 14:26:04 as ** along with 1 person jfr
  • Heterogeneity of biofilms formed by nonmucoid Pseudomonas aeruginosa isolates from patients with cystic fibrosis.
    Journal of clinical microbiology, Vol. 43, No. 10. (October 2005), pp. 5247-5255.
    by B Lee, JA Haagensen, O Ciofu, JB Andersen, N Høiby, S Molin
    posted to cf biofilm by bakakaj on 2008-07-18 21:02:21 as **
  • DNA Microarrays in Analysis of Quorum Sensing: Strengths and Limitations
    J. Bacteriol., Vol. 185, No. 7. (1 April 2003), pp. 2061-2065.
    by Michael L Vasil
    posted to transcriptomics review qs aeruginosa by bakakaj on 2008-07-14 18:47:16 as **
  • Engineering the luxCDABE genes from Photorhabdus luminescens to provide a bioluminescent reporter for constitutive and promoter probe plasmids and mini-Tn5 constructs.
    FEMS microbiology letters, Vol. 163, No. 2. (15 June 1998), pp. 193-202.
    by MK Winson, S Swift, PJ Hill, CM Sims, G Griesmayr, BW Bycroft, P Williams, GS Stewart
    posted to lux by bakakaj on 2008-07-13 14:29:23 as **
  • Role of haemolytic and non-haemolytic phospholipase C from Pseudomonas aeruginosa in interleukin-8 release from human monocytes.
    Journal of medical microbiology, Vol. 46, No. 6. (June 1997), pp. 471-478.
    by B König, ML Vasil, W König
    posted to interacitons host-pathogen cf aeruginosa by bakakaj on 2008-07-13 13:31:09 as **
  • Components of the protein-excretion apparatus of Pseudomonas aeruginosa are processed by the type IV prepilin peptidase.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 89, No. 1. (1 January 1992), pp. 47-51.
    by DN Nunn, S Lory
    posted to t4bss aeruginosa by bakakaj on 2008-07-11 16:04:15 as **
  • Regulation of enzyme synthesis in the arginine deiminase pathway of Pseudomonas aeruginosa.
    Journal of bacteriology, Vol. 144, No. 1. (October 1980), pp. 159-163.
    by A Mercenier, JP Simon, C Vander Wauven, D Haas, V Stalon
    posted to anaerobic aeruginosa by bakakaj on 2008-07-11 13:43:21 as **
  • Anaerobic metabolism and quorum sensing by Pseudomonas aeruginosa biofilms in chronically infected cystic fibrosis airways: rethinking antibiotic treatment strategies and drug targets.
    Advanced drug delivery reviews, Vol. 54, No. 11. (5 December 2002), pp. 1425-1443.
    by DJ Hassett, J Cuppoletti, B Trapnell, SV Lymar, JJ Rowe, SS Yoon, GM Hilliard, K Parvatiyar, MC Kamani, DJ Wozniak, SH Hwang, TR McDermott, UA Ochsner
    posted to cf biofilm anaerobic aeruginosa by bakakaj on 2008-07-11 13:42:45 as **
  • Spatial physiological heterogeneity in Pseudomonas aeruginosa biofilm is determined by oxygen availability.
    Applied and environmental microbiology, Vol. 64, No. 10. (October 1998), pp. 4035-4039.
    by KD Xu, PS Stewart, F Xia, CT Huang, GA McFeters
    posted to biofilm anaerobic aeruginosa by bakakaj on 2008-07-11 13:41:48 as **
  • Deletion of znuA Virulence Factor Attenuates Brucella abortus and Confers Protection against Wild-Type Challenge
    Infect. Immun., Vol. 74, No. 7. (1 July 2006), pp. 3874-3879.
    by Xinghong Yang, Todd Becker, Nancy Walters, David W Pascual
    posted to zinc by bakakaj on 2008-07-11 13:39:40 as **
  • Zinc uptake system (znuA locus) of Brucella abortus is essential for intracellular survival and virulence in mice.
    The Journal of veterinary medical science / the Japanese Society of Veterinary Science, Vol. 66, No. 9. (September 2004), pp. 1059-1063.
    by S Kim, K Watanabe, T Shirahata, M Watarai
    posted to zinc by bakakaj on 2008-07-11 13:37:04 as **
  • The high-affinity zinc-uptake system znuACB is under control of the iron-uptake regulator (fur) gene in the animal pathogen Pasteurella multocida
    FEMS Microbiology Letters, Vol. 221, No. 1. (11 April 2003), pp. 31-37.
    by Elena M Garrido, Montserrat Bosch, Ricardo Medina, Montserrat Llagostera, Pérez, Ignacio Badiola, Jordi Barbé
    posted to zinc by bakakaj on 2008-07-11 13:36:03 as **
  • Role of the High-Affinity Zinc Uptake znuABC System in Salmonella enterica Serovar Typhimurium Virulence
    Infect. Immun., Vol. 70, No. 8. (1 August 2002), pp. 4721-4725.
    by Susana Campoy, Monica Jara, Nuria Busquets, Perez, Ignacio Badiola, Jordi Barbe
    posted to zinc salmonella by bakakaj on 2008-07-11 13:35:28 as **
  • Iron metabolism in pathogenic bacteria.
    Annual review of microbiology, Vol. 54 (2000), pp. 881-941.
    by C Ratledge, LG Dover
    posted to review iron by bakakaj on 2008-07-11 13:34:17 as **
  • Iron acquisition in microbial pathogenesis.
    Trends in microbiology, Vol. 1, No. 2. (May 1993), pp. 66-69.
    by SM Payne
    posted to review iron by bakakaj on 2008-07-11 13:33:24 as **
  • An operon containing fumC and sodA encoding fumarase C and manganese superoxide dismutase is controlled by the ferric uptake regulator in Pseudomonas aeruginosa: fur mutants produce elevated alginate levels.
    Journal of bacteriology, Vol. 179, No. 5. (March 1997), pp. 1452-1459.
    by DJ Hassett, ML Howell, UA Ochsner, ML Vasil, Z Johnson, GE Dean
    posted to alginate aeruginosa by bakakaj on 2008-07-11 13:32:20 as **
  • Inhibition of quorum sensing in Pseudomonas aeruginosa biofilm bacteria by a halogenated furanone compound
    Microbiology, Vol. 148, No. 1. (1 January 2002), pp. 87-102.
    by Morten Hentzer, Kathrin Riedel, Thomas B Rasmussen, Arne Heydorn, Jens B Andersen, Matthew R Parsek, Scott A Rice, Leo Eberl, Soren Molin, Niels Hoiby, Staffan Kjelleberg, Michael Givskov
    posted to qs gfp biofilm aeruginosa by bakakaj on 2008-07-11 13:28:05 as **
  • A Convenient Synthesis of Protoanemonin.
    ChemInform, Vol. 35, No. 8. (2004)
    by Caroline Crey, Pascal Dumy, Jean Lhomme, Mitsuharu Kotera
    posted to protoanemonin by bakakaj on 2008-07-11 13:21:58 as **
  • From xenobiotic to antibiotic, formation of protoanemonin from 4-chlorocatechol by enzymes of the 3-oxoadipate pathway.
    The Journal of biological chemistry, Vol. 270, No. 49. (8 December 1995), pp. 29229-29235.
    by R Blasco, RM Wittich, M Mallavarapu, KN Timmis, DH Pieper
    posted to protoanemonin by bakakaj on 2008-07-11 12:36:35 as **
  • Anaerobic survival of Pseudomonas aeruginosa by pyruvate fermentation requires an Usp-type stress protein.
    Journal of bacteriology, Vol. 188, No. 2. (January 2006), pp. 659-668.
    by K Schreiber, N Boes, M Eschbach, L Jaensch, J Wehland, T Bjarnsholt, M Givskov, M Hentzer, M Schobert
    posted to pyruvate anaerobic aeruginosa by bakakaj on 2008-07-11 12:35:44 as **
  • Characterization of five novel Pseudomonas aeruginosa cell-surface signalling systems.
    Molecular microbiology, Vol. 67, No. 2. (January 2008), pp. 458-472.
    by MA Llamas, MJ Mooij, M Sparrius, CM Vandenbroucke-Grauls, C Ratledge, W Bitter
    posted to iron ecf aeruginosa by bakakaj on 2008-07-11 12:33:24 as **
  • The alginate regulator AlgR and an associated sensor FimS are required for twitching motility in Pseudomonas aeruginosa.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 93, No. 18. (3 September 1996), pp. 9839-9843.
    by CB Whitchurch, RA Alm, JS Mattick
    posted to algr alginate aeruginosa by bakakaj on 2008-07-11 12:32:38 as **
  • Prokaryotic Osmoregulation: Genetics and Physiology
    Annual Review of Microbiology, Vol. 45, No. 1. (1991), pp. 569-606.
    by LN Csonka, AD Hanson
    posted to osmoregulation by bakakaj on 2008-07-11 12:31:47 as **
  • Fluorescence-based isolation of bacterial genes expressed within host cells.
    Science (New York, N.Y.), Vol. 277, No. 5334. (26 September 1997), pp. 2007-2011.
    by RH Valdivia, S Falkow
    posted to in-vivo by bakakaj on 2008-07-11 12:30:37 as **
  • Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
    Genome research, Vol. 15, No. 2. (February 2005), pp. 321-329.
    by S Lewenza, JL Gardy, FS Brinkman, RE Hancock
    posted to transport membrane aeruginosa by bakakaj on 2008-07-11 12:26:16 as **
  • Pseudomonas keratitis. The role of an uncharacterized exoprotein, protease IV, in corneal virulence.
    Investigative ophthalmology & visual science, Vol. 37, No. 4. (March 1996), pp. 534-543.
    by RJ O'Callaghan, LS Engel, JA Hobden, MC Callegan, LC Green, JM Hill
    posted to keratitis infection corneal aeruginosa by bakakaj on 2008-07-11 12:24:51 as **
  • Proteomic study of the Bacillus subtilis ribosome: Finding of zinc-dependent replacement for ribosomal protein L31 paralogues.
    The Journal of general and applied microbiology, Vol. 52, No. 5. (October 2006), pp. 249-258.
    by H Nanamiya, F Kawamura, S Kosono
    posted to zinc ribosomal bacillus by bakakaj on 2008-07-11 12:23:00 as **
  • Responses of benthic macroinvertebrates to thin-layer disposal of dredged material in Mississippi Sound, USA
    Marine Pollution Bulletin, Vol. 54, No. 1. (January 2007), pp. 42-52.
    by Dara H Wilber, Douglas G Clarke, Susan I Rees
    posted to statistics by bakakaj on 2008-07-11 12:17:51 as **
  • Non-parametric multivariate analyses of changes in community structure
    Austral Ecology, Vol. 18, No. 1. (1993), pp. 117-143.
    by KR Clarke
    posted to statistics mds by bakakaj on 2008-07-11 12:16:41 as **
  • A complementation analysis of the restriction and modification of DNA in Escherichia coli.
    Journal of molecular biology, Vol. 41, No. 3. (14 May 1969), pp. 459-472.
    by HW Boyer, D Roulland-Dussoix
    posted to ecoli by bakakaj on 2008-07-11 12:02:00 as **
  • Halogenated furanones inhibit quorum sensing through accelerated LuxR turnover.
    Microbiology (Reading, England), Vol. 148, No. Pt 4. (April 2002), pp. 1119-1127.
    by M Manefield, TB Rasmussen, M Henzter, JB Andersen, P Steinberg, S Kjelleberg, M Givskov
    posted to qs aeruginosa by bakakaj on 2008-07-11 12:00:45 as **
  • Genetic adaptation by Pseudomonas aeruginosa to the airways of cystic fibrosis patients.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 22. (30 May 2006), pp. 8487-8492.
    by EE Smith, DG Buckley, Z Wu, C Saenphimmachak, LR Hoffman, DA D'Argenio, SI Miller, BW Ramsey, DP Speert, SM Moskowitz, JL Burns, R Kaul, MV Olson
    posted to genom cf aeruginosa by bakakaj on 2008-07-11 11:00:46 as **
  • Staphylococcus aureus serves as an iron source for Pseudomonas aeruginosa during in vivo coculture.
    Journal of bacteriology, Vol. 187, No. 2. (January 2005), pp. 554-566.
    by LM Mashburn, AM Jett, DR Akins, M Whiteley
    posted to iron in-vivo coinfection aeruginosa by bakakaj on 2008-07-11 10:59:20 as **
  • Use of the Galleria mellonella Caterpillar as a Model Host To Study the Role of the Type III Secretion System in Pseudomonas aeruginosa Pathogenesis
    Infect. Immun., Vol. 71, No. 5. (1 May 2003), pp. 2404-2413.
    by Sachiko Miyata, Monika Casey, Dara W Frank, Frederick M Ausubel, Eliana Drenkard
    posted to model aeruginosa by bakakaj on 2008-07-11 10:57:50 as **
  • Silkworm larvae as an animal model of bacterial infection pathogenic to humans
    Microbial Pathogenesis, Vol. 32, No. 4. (April 2002), pp. 183-190.
    by Chikara Kaito, Nobuyoshi Akimitsu, Haruo Watanabe, Kazuhisa Sekimizu
    posted to model aeruginosa by bakakaj on 2008-07-11 10:51:04 as **
  • Pseudomonas aeruginosa Virulence Analyzed in a Dictyostelium discoideum Host System
    J. Bacteriol., Vol. 184, No. 11. (1 June 2002), pp. 3027-3033.
    by Pierre Cosson, Laurence Zulianello, Olivier Join-Lambert, Francois Faurisson, Leigh Gebbie, Mohammed Benghezal, Christian van Delden, Lasta K Curty, Thilo Kohler
    posted to model aeruginosa by bakakaj on 2008-07-11 10:49:45 as **
  • Drosophila as a model host for Pseudomonas aeruginosa infection.
    Journal of bacteriology, Vol. 183, No. 4. (February 2001), pp. 1466-1471.
    by DA D'Argenio, LA Gallagher, CA Berg, C Manoil
    posted to model aeruginosa by bakakaj on 2008-07-11 10:49:13 as **
  • Caenorhabditis elegans: a model genetic host to study Pseudomonas aeruginosa pathogenesis
    Current Opinion in Microbiology, Vol. 3, No. 1. (1 February 2000), pp. 29-34.
    by Man-Wah Tan, Frederick M Ausubel
    posted to model aeruginosa by bakakaj on 2008-07-11 10:47:42 as **
  • Pseudomonas aeruginosa regulates flagellin expression as part of a global response to airway fluid from cystic fibrosis patients.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 17. (27 April 2004), pp. 6664-6668.
    by MC Wolfgang, J Jyot, AL Goodman, R Ramphal, S Lory
    posted to transcriptomics flagellin cf aeruginosa by bakakaj on 2008-07-11 10:36:18 as **
  • The response of Pseudomonas aeruginosa to iron: genetics, biochemistry and virulence.
    Molecular microbiology, Vol. 34, No. 3. (November 1999), pp. 399-413.
    by ML Vasil, UA Ochsner
    posted to iron aeruginosa by bakakaj on 2008-07-11 10:35:14 as **
  • Quorum-sensing genes in Pseudomonas aeruginosa biofilms: their role and expression patterns.
    Appl Environ Microbiol, Vol. 67, No. 4. (April 2001), pp. 1865-1873.
    by TR De Kievit, R Gillis, S Marx, C Brown, BH Iglewski
    posted to qs biofilm aeruginosa by bakakaj on 2008-07-11 10:34:38 as ** along with 1 person CareyNadell
  • The Involvement of Cell-to-Cell Signals in the Development of a Bacterial Biofilm
    Science, Vol. 280, No. 5361. (10 April 1998), pp. 295-298.
    by David G Davies, Matthew R Parsek, James P Pearson, Barbara H Iglewski, JW Costerton, EP Greenberg
    posted to qs biofilm aeruginosa by bakakaj on 2008-07-11 10:34:11 as ** along with 1 person jmeppley
  • Pseudomonas aeruginosa biofilms exposed to imipenem exhibit changes in global gene expression and beta-lactamase and alginate production.
    Antimicrobial agents and chemotherapy, Vol. 48, No. 4. (April 2004), pp. 1175-1187.
    by N Bagge, M Schuster, M Hentzer, O Ciofu, M Givskov, EP Greenberg, N Høiby
    posted to transcriptomics biofilm alginate aeruginosa by bakakaj on 2008-07-11 10:33:40 as **
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