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aviad_work library [56 articles]

最近 aviad_work さんのライブラリ .
  • MOST: detecting cancer differential gene expression
    Biostat (29 November 2007), kxm042.
    by Heng Lian
    posted to expression_data differential_genes cope by aviad_work on 2008-05-15 22:52:24 as **
  • When does non-negative matrix factorization give a correct decomposition into parts
    (2003)
    by D Donoho, V Stodden
  • Merging Two Gene Expression Studies via Cross Platform Normalization
    Bioinformatics (5 March 2008), btn083.
    by Andrey A Shabalin, Hakon Tjelmeland, Cheng Fan, Charles M Perou, Andrew B Nobel
  • Unequal group variances in microarray data analyses.
    Bioinformatics (14 March 2008)
    by Meaza Demissie, Barbara Mascialino, Stefano Calza, Yudi Pawitan
  • Jointly Analyzing Gene Expression and Copy Number Data in Breast Cancer Using Data Reduction Models
    IEEE/ACM Trans. Comput. Biol. Bioinformatics, Vol. 3, No. 1. (January 2006)
    by John A Berger, Sampsa Hautaniemi, Sanjit K Mitra, Jaakko Astola
    posted to cdna copy_number_alterations gene_expression snp by aviad_work on 2008-04-02 21:55:10 as ***
  • Cluster-wise assessment of cluster stability
    Computational Statistics & Data Analysis, Vol. 52, No. 1. (15 September 2007), pp. 258-271.
    by Christian Hennig
    posted to clustering cluster_validation pattern_recognition by aviad_work on 2008-03-06 15:29:39 as ***
  • Graph-based consensus clustering for class discovery from gene expression data
    Bioinformatics, Vol. 23, No. 21. (1 November 2007), pp. 2888-2896.
    by Zhiwen Yu, Hau-San Wong, Hongqiang Wang
  • Linking oncogenic pathways with therapeutic opportunities
    Nature Reviews Cancer, Vol. 6, No. 9. (17 August 2006), pp. 735-741.
    by Andrea H Bild, Anil Potti, Joseph R Nevins
  • Top 10 algorithms in data mining
    Knowledge and Information Systems, Vol. 14, No. 1. (20 January 2008), pp. 1-37.
    by Xindong Wu, Vipin Kumar, Ross, Joydeep Ghosh, Qiang Yang, Hiroshi Motoda, Geoffrey Mclachlan, Angus Ng, Bing Liu, Philip Yu, Zhi-Hua Zhou, Michael Steinbach, David Hand, Dan Steinberg
  • Computational cluster validation in post-genomic data analysis.
    Bioinformatics, Vol. 21, No. 15. (1 August 2005), pp. 3201-3212.
    by J Handl, J Knowles, DB Kell
  • High-resolution genomic profiles define distinct clinico-pathogenetic subgroups of multiple myeloma patients.
    Cancer Cell, Vol. 9, No. 4. (April 2006), pp. 313-325.
  • MDQC: a new quality assessment method for microarrays based on quality control reports
    Bioinformatics, Vol. 23, No. 23. (1 December 2007), pp. 3162-3169.
    by Cohen, Zsuzsanna Hollander, Enqing Shen, Ruben H Zamar, Robert Balshaw, Andreas Scherer, Bruce Mcmanus, Paul Keown, Robert W Mcmaster, Raymond T Ng
  • I/NI-calls for the exclusion of non-informative genes: a highly effective filtering tool for microarray data
    Bioinformatics, Vol. 23, No. 21. (1 November 2007), pp. 2897-2902.
    by Willem Talloen, Djork-Arne Clevert, Sepp Hochreiter, Dhammika Amaratunga, Luc Bijnens, Stefan Kass, Hinrich W Gohlmann
    posted to gene_selection microarray_analysis by aviad_work on 2007-12-26 19:24:50 as read along with 1 person cassj
  • Molecular risk stratification in pediatric medulloblastoma
    Journal of Clinical Oncology
    posted to medulloblastoma outcome by aviad_work on 2007-12-20 17:21:59 as **
  • Analysis of PTCH/SMO/SHH pathway genes in medulloblastoma.
    Genes Chromosomes Cancer, Vol. 27, No. 1. (January 2000), pp. 44-51.
    by RH Zurawel, C Allen, S Chiappa, W Cato, J Biegel, P Cogen, F de Sauvage, C Raffel
    posted to cancer medulloblastoma pathways by aviad_work on 2007-12-18 18:36:55 as **
  • Medulloblastoma: developmental mechanisms out of control
    Trends in Molecular Medicine, Vol. 11, No. 1. (January 2005), pp. 17-22.
    by Silvia Marino
    posted to cancer medulloblastoma by aviad_work on 2007-12-18 18:31:40 as **
  • Nodule formation and desmoplasia in medulloblastomas-defining the nodular/desmoplastic variant and its biological behavior.
    Brain Pathol, Vol. 17, No. 2. (April 2007), pp. 151-164.
    by CS McManamy, J Pears, CL Weston, Z Hanzely, JW Ironside, RE Taylor, RG Grundy, SC Clifford, DW Ellison,
    posted to cancer desmoplastic medulloblastoma by aviad_work on 2007-12-18 18:13:00 as **
  • Medulloblastomas overexpress the p53-inactivating oncogene WIP1/PPM1D.
    J Neurooncol (12 October 2007)
    by Robert C Castellino, Massimiliano De Bortoli, Xiongbin Lu, Sung-Hwan H Moon, Thuy-Ai A Nguyen, Mark A Shepard, Pulivarthi H Rao, Lawrence A Donehower, John Y Kim
    posted to cancer medulloblastoma p53 by aviad_work on 2007-12-18 18:09:31 as **
  • Wnt/Wingless pathway activation and chromosome 6 loss characterize a distinct molecular sub-group of medulloblastomas associated with a favorable prognosis.
    Cell Cycle, Vol. 5, No. 22. (November 2006), pp. 2666-2670.
    posted to cancer medulloblastoma wnt_pathway by aviad_work on 2007-12-18 18:00:06 as *** along with 1 person jlangdon
  • c-Myc Overexpression Causes Anaplasia in Medulloblastoma
    Cancer Res, Vol. 66, No. 2. (15 January 2006), pp. 673-681.
    by Duncan Stearns, Aneeka Chaudhry, Ty W Abel, Peter C Burger, Chi V Dang, Charles G Eberhart
    posted to cancer cmyc medulloblastoma by aviad_work on 2007-12-18 17:49:01 as read
  • Estimating the number of clusters in a dataset via the gap statistic
    (2000)
  • Summaries of Affymetrix GeneChip probe level data.
    Nucleic Acids Res, Vol. 31, No. 4. (15 February 2003)
    by RA Irizarry, BM Bolstad, F Collin, LM Cope, B Hobbs, TP Speed
  • Hierarchical clustering based on ordinal consistency
    Pattern Recognition, Vol. 38, No. 11. (November 2005), pp. 1913-1925.
    by John W Lee, Daniel S Yeung, Eric C Tsang
    posted to clustering hierarchical by aviad_work on 2007-12-05 16:59:43 as **
  • Clustering Validity Based on the Improved Hubert Γ Statistic and the Separation of Clusters
    (2006), pp. 539-543.
    by Heng Zhao, Jimin Liang, Haihong Hu
    posted to clustering hubert validation by aviad_work on 2007-12-05 16:54:47 as ***
  • Computational cluster validation in post-genomic data analysis
    Bioinformatics, Vol. 21, No. 15. (1 August 2005), pp. 3201-3212.
    by Julia Handl, Joshua Knowles, Douglas B Kell
    posted to clustering validation by aviad_work on 2007-12-05 16:54:12 as ***
  • Methods for evaluating clustering algorithms for gene expression data using a reference set of functional classes
    BMC Bioinformatics, Vol. 7 (31 August 2006), 397.
    by Susmita Datta, Somnath Datta
  • Clustering by soft-constraint affinity propagation: applications to gene-expression data
    Bioinformatics, Vol. 23, No. 20. (15 October 2007), pp. 2708-2715.
    by Michele Leone, Sumedha, Martin Weigt
  • Exploiting sample variability to enhance multivariate analysis of microarray data.
    Bioinformatics (7 September 2007)
    by Carla S S Möller-Levet, Catharine M M West, Crispin J J Miller
  • Eu.Gene Analyzer a tool for integrating gene expression data with pathway databases.
    Bioinformatics (28 June 2007)
    by Duccio Cavalieri, Cinzia Castagnini, Simona Toti, Karolina Maciag, Thomas Kelder, Luca Gambineri, Samuele Angioli, Piero Dolara
  • A review of feature selection techniques in bioinformatics.
    Bioinformatics (24 August 2007)
    by Yvan Saeys, Iñaki Inza, Pedro Larrañaga
  • Sparse Non-negative Matrix Factorizations via Alternating Non-negativity-constrained Least Squares for Microarray Data Analysis.
    Bioinformatics (5 May 2007)
    by Hyunsoo Kim, Haesun Park
  • Improving molecular cancer class discovery through sparse non-negative matrix factorization
    Bioinformatics, Vol. 21, No. 21. (1 November 2005), pp. 3970-3975.
    by Yuan Gao, George Church
  • Metagenes and molecular pattern discovery using matrix factorization.
    Proc Natl Acad Sci U S A, Vol. 101, No. 12. (23 March 2004), pp. 4164-4169.
    by JP Brunet, P Tamayo, TR Golub, JP Mesirov
  • High-throughput oncogene mutation profiling in human cancer
    Nature Genetics, Vol. 39, No. 3. (11 February 2007), pp. 347-351.
    by Roman K Thomas, Alissa C Baker, Ralph M Debiasi, Wendy Winckler, Thomas Laframboise, William M Lin, Meng Wang, Whei Feng, Thomas Zander, Laura E Macconnaill, Jeffrey C Lee, Rick Nicoletti, Charlie Hatton, Mary Goyette, Luc Girard, Kuntal Majmudar, Liuda Ziaugra, Kwok-Kin Wong, Stacey Gabriel, Rameen Beroukhim, Michael Peyton, Jordi Barretina, Amit Dutt, Caroline Emery, Heidi Greulich, Kinjal Shah, Hidefumi Sasaki, Adi Gazdar, John Minna, Scott A Armstrong, Ingo K Mellinghoff, Stephen F Hodi, Glenn Dranoff, Paul S Mischel, Tim F Cloughesy, Stan F Nelson, Linda M Liau, Kirsten Mertz, Mark A Rubin, Holger Moch, Massimo Loda, William Catalona, Jonathan Fletcher, Sabina Signoretti, Frederic Kaye, Kenneth C Anderson, George D Demetri, Reinhard Dummer, Stephan Wagner, Meenhard Herlyn, William R Sellers, Matthew Meyerson, Levi A Garraway
  • Molecular biology of medulloblastoma therapy.
    Pediatr Neurosurg, Vol. 39, No. 6. (December 2003), pp. 299-304.
    by SL Pomeroy, LM Sturla
    posted to medullo molecular_biology by aviad_work on 2007-10-11 18:43:48 as read
  • Metagene projection for cross-platform, cross-species characterization of global transcriptional states.
    Proc Natl Acad Sci U S A, Vol. 104, No. 14. (3 April 2007), pp. 5959-5964.
    by P Tamayo, D Scanfeld, BL Ebert, MA Gillette, CW Roberts, JP Mesirov
  • From the Cover: Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
    PNAS, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550.
    by Aravind Subramanian, Pablo Tamayo, Vamsi K Mootha, Sayan Mukherjee, Benjamin L Ebert, Michael A Gillette, Amanda Paulovich, Scott L Pomeroy, Todd R Golub, Eric S Lander, Jill P Mesirov
  • False discovery rate, sensitivity and sample size for microarray studies.
    Bioinformatics, Vol. 21, No. 13. (1 July 2005), pp. 3017-3024.
  • A Breadth-First Algorithm for Mining Frequent Patterns from Event Logs
    by Risto Vaarandi
    posted to event_log_analysis by aviad_work on 2007-07-31 10:53:30 as **
  • A Tutorial on Principal Component Analysis
    (10 December 2005)
    by Jonathon Shlens
    posted to ml pca tutorial by aviad_work on 2007-07-28 21:09:19 as ** along with 686 people and 131 groups fernand0 dperkel egh jyuh samth sora florine ladygoat hopm hellige parmentierf ssn mortimer tinkha V plaugg ansobol mjaz berthelemy eldan pdlug zephoria carloscabanillas Janos bkliethermes nazareno elsantosneto januadiaboli yaroslavvb jurijmlotman geomblog srl bigga treycausey CSG mcphee chandrashekar denns matzke sherrivokey sona cassj lijil hlovise coolger incites bigmagpie alicetiara yorgos johannsen cavlec smbrower viller jenmy mlzafron tymmail sedging davidr macowell eimaj42jdp Flit BenWillems agallet hawesie sngourlay jolilius rmagf acer ville garyfeng danifazzio willwade gantlord melanieramage mgregg cwb neteler carneym crispinb rdlong lillekatt davemack agarza carsonr imcdnzl tjimenez Tolik lna dmikurube szityu michmill P2324548 jpbenda Vaccine tadm mkwalker anar grzegorz japple planetoid okarsligil stormybriggs UWerplab nbr inbetweener pafmon stina pgastrein xiruela kutabar jfr xamde kliether mleis jshahin cmunson lfriedl sharonhoward ccots terraces czlamer brent_lance subhradeep jjray Jellyfish cmmorel bayesian benavides ghsalazar manuelpq sekulerlab jmaryott kristina chad_davis Ayest thens RMGraze e2holmes JAShapiro contradictoryben lrodero jamesfournie nybon hawkestein diegolino_veneziano rvosa Schmidtc lyongu ricmilne KarinaFigueroa jfmenudet cdmilligan great_apes brthz juliajumeau gloinf billwolff mrkrause halsnalle pintman yish mkcerusky cyph3r idm smithco ruudvanleeuwen BarrosH aelva harshpshah earnoux princessbritty Laki kupopo ryang eustatic daqing balicea stain matts ram frankgrimes Pfaff9 locatellimp seawidget ianli kate_waxlyrical rherring ThomasEtEckert cliona shaun gregnishihara harmonjt Happybene jklugman mwyarbro rburnett prabakaran nperrin tystl gugek NicolasNeubauer gytisc Nele pedagogicapprentice dlouzeck phillipkent emerson rafamayo arichar6 pasion sadsackmac gbae redcourgette sunilbajpai JJNonesuch heintz BuckeyePhysicist bretblosser charlesijones term duckysherwood madhadron ypeter cmm agraham yijisoo jberro peaksun balabu djsaab crumj garypearce rinelk plashkes PaulB charlescearl malkav30 p2p-sec langec tuaba os252 JonathanFeinberg jingliu dvoigt hywel tshr dgront isorhiza foistudy jenine donade kmcolo fisherp voiklis insilico fitzgeraldsteele junoda sumeetonweb familydoc craigtalbert dmitri83 dmboyer martint RalphPutnam atsu-kan hlwoodcock reta gogabr smmurphy rafabravo dabhishe JennaW hisashim cjones chuggins Sulpicus ranb alikocho hiromark gane5h l-alex rdiaz pilho danzinde ueberweise wangsd echinotrix ak Odi bezbozhnik todchambers perceptron wasteland93 yizheng stephane-jean mahlow mbaric mtr anon_pl dir289 lanubile fcalefato dpeeler QFRMC xwenlong johncumbers kgronemyer keitokita hkl pervane mpennell kedmond mfisk brusilovsky gregflanders hgamboa pgeymueller last5laps jbrown nathanielvirgo rwm101 ChristianGraf marohn davetown101 barbz79it naturecure edgarbc muellerkind fugitive joshuashen kndiaye 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folk_epistemology instaar_graduate_students Projet_ENSIMAG climate_change BUiGEM social_navigation Macroelectronics ARC04 The_Truants QFRMC_ConsumerCredit Plant-Tissue-Simulation METRIK Metaheuristics Boydian_Society eLearning BioinfoCIPF Nutritional_Polymorphisms CaltechCMP SEGAL Optimization location SNE kickOffTUG-Robocup NanoMechanicsofMetals_MPIMF Georouting Child_Support Software-Architecture ParkinsonLab_at_MaRS moernerlab ilps livingthing HUCO-627-W07 elearning_research PLE-TEL-project Femtochemistry_LMU ediadem ENSSIBVeille memoir ILK ColDyn ImatiGESemantic AGH-IISG PRC_SEA TCD-NDS102-Project CAOS Adaptive-Web Microbial-Ecology Flexible_ICT-supported_learning Social_Software_ws_07-08 DialogueResearchGroup AM-VideoGames-Gender dIEMoSIRIS microbiology_nijmegen Europe_GPE ZnO_project ADMiRes Health_Sciences_Librarians feminist_technoscience Desgin-by-Contract MITCCI Kopelman_Group DarkMarkGroup VivesMinions PostureMobility compneur Philosophy of physics PsychStatsBanter Video 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  • Towards Informatic Analysis of Syslogs
    by Jon S Sandia
    posted to events_analysis ml by aviad_work on 2007-07-28 21:07:14 as **
  • Approximate Nearest Neighbor under edit distance via product metrics
    (2004), pp. 646-650.
    by Piotr Indyk
    posted to clustering ml by aviad_work on 2007-07-28 21:05:57 as ** along with 1 person meerkat
  • A Breadth-First Algorithm for Mining Frequent Patterns from Event Logs
    Intelligence in Communication Systems (2004), pp. 293-308.
    by Risto Vaarandi
    posted to events_analysis ml by aviad_work on 2007-07-28 21:03:15 as ** along with 1 person rclemente
  • Data clustering: a review
    ACM Comput. Surv., Vol. 31, No. 3. (September 1999), pp. 264-323.
    by AK Jain, MN Murty, PJ Flynn