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alexg functional_prediction [15 articles]

最近 alexg さんのライブラリに追加された論文の中から タグ functional_prediction. You can also see everyone's functional_prediction.
  • Rate4Site: An algorithmic tool for the identification of functional regions in proteins by surface mapping of evolutionary determinants within their homologues.
    Bioinformatics, Vol. 18 (2002), pp. S71-S77.
    by T Pupko, RE Bell, I Mayrose, F Glaser, Ben N Tal
    posted to evolution functional_prediction by alexg on 2005-10-24 10:52:49 as read
  • Prediction of catalytic residues in enzymes based on known tertiary structure, stability profile, and sequence conservation.
    J Mol Biol, Vol. 327 (2003)
    by M Ota, K Kinoshita, K Nishikawa
    posted to enzyme functional_prediction by alexg on 2005-10-24 10:52:49 as read
  • From protein structure to function.
    Curr Opin Struct Biol, Vol. 9 (1999), pp. 374-82.
    by CA Orengo, AE Todd, JM Thornton
    posted to functional_prediction by alexg on 2005-10-24 10:52:49 as read
  • THEMATICS: a simple computational predictor of enzyme function from structure.
    Proc Natl Acad Sci U S A, Vol. 98 (2001), pp. 12473-8.
    by MJ Ondrechen, JG Clifton, D Ringe
    posted to enzyme functional_prediction pka by alexg on 2005-10-24 10:52:49 as read
  • Structural Clusters of Evolutionary Trace Residues are Statistically Significant and Common in Proteins.
    J Mol Biol, Vol. 316 (2002), pp. 139-154.
    by S Madabushi, H Yao, M Marsh, DM Kristensen, A Philippi, ME Sowa, O Lichtarge
    posted to functional_prediction by alexg on 2005-10-24 10:52:49 as read
  • An evolutionary trace method defines binding surfaces common to protein families.
    J Mol Biol, Vol. 257 (1996), pp. 342-58.
    by O Lichtarge, HR Bourne, FE Cohen
    posted to functional_prediction by alexg on 2005-10-24 10:52:49 as read
  • ProFunc: a server for predicting protein function from 3D structure.
    Nucleic Acids Res, Vol. 33 (2005), pp. W89-93.
    by RA Laskowski, JD Watson, JM Thornton
    posted to functional_prediction by alexg on 2005-10-24 10:52:49 as read
  • Searching for functional sites in protein structures.
    Curr Opin Chem Biol, Vol. 8 (2004), pp. 3-7.
    by S Jones, JM Thornton
    posted to functional_prediction by alexg on 2005-10-24 10:52:49 as read
  • Prediction of functional sites in proteins using conserved functional group analysis.
    J Mol Biol, Vol. 337 (2004), pp. 1053-68.
    by CA Innis, AP Anand, R Sowdhamini
    posted to functional_prediction by alexg on 2005-10-24 10:52:49 as read
  • Prediction of functionally important residues based solely on the computed energetics of protein structure
    J Mol Biol, Vol. 312 (2001), pp. 885-896.
    by AH Elcock
    posted to enzyme functional_prediction by alexg on 2005-10-24 10:52:49 as read
  • ConSurf: an algorithmic tool for the identification of functional regions in proteins by surface mapping of phylogenetic information.
    J Mol Biol, Vol. 307 (2001), pp. 447-463.
    by A Armon, D Graur, Ben N Tal
    posted to functional_prediction by alexg on 2005-10-24 10:52:49 as read
  • Automated structure-based prediction of functional sites in proteins: applications to assessing the validity of inheriting protein function from homology in genome annotation and to protein docking.
    J Mol Biol, Vol. 311 (2001), pp. 395-408.
    by P Aloy, E Querol, FX Aviles, MJ Sternberg
    posted to functional_prediction by alexg on 2005-10-24 10:52:49 as read
  • Using a library of structural templates to recognise catalytic sites and explore their evolution in homologous families.
    J Mol Biol, Vol. 347, No. 3. (1 April 2005), pp. 565-581.
    by JW Torrance, GJ Bartlett, CT Porter, JM Thornton
    posted to annotation csa enzyme functional_prediction protein_structure by alexg on 2005-10-24 10:32:26 as read along with 4 people and 1 group jwm chrn Einat gbart structural_bioinformatics
  • Improvement in protein functional site prediction by distinguishing structural and functional constraints on protein family evolution using computational design.
    Nucleic Acids Res, Vol. 33, No. 18. (2005), pp. 5861-5867.
    by Gong Cheng, Bin Qian, Ram Samudrala, David Baker
    posted to functional_prediction by alexg on 2005-10-24 10:31:10 as **** along with 6 people and 3 groups bicko Einat marcius nickolay sriram_s ladab structural_bioinformatics BioinfoCIPF SGU-CIPF
  • Using a neural network and spatial clustering to predict the location of active sites in enzymes.
    J Mol Biol, Vol. 330, No. 4. (18 July 2003), pp. 719-734.
    by A Gutteridge, GJ Bartlett, JM Thornton
    posted to catalysis enzyme functional_prediction neural_network protein_structure by alexg on 2005-10-24 10:20:56 as read along with 6 people and 1 group tjimenez chrn Einat gbart eweaver sriram_s structural_bioinformatics
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