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Neeperando alignment [22 articles]

最近 Neeperando さんのライブラリに追加された論文の中から タグ alignment. You can also see everyone's alignment.
  • Grammar-based distance in progressive multiple sequence alignment
    BMC Bioinformatics, Vol. 9 (10 July 2008), 306.
    by David J Russell, Hasan H Otu, Khalid Sayood
    posted to grammar distance alignment by Neeperando on 2008-07-14 15:36:31 as ** along with 1 person nuin
  • Database Indexing for Production MegaBLAST Searches
    Bioinformatics (21 June 2008), btn322.
    by Aleksandr Morgulis, George Coulouris, Yan Raytselis, Thomas L Madden, Richa Agarwala, Alejandro A Schaffer
    posted to alignment by Neeperando on 2008-06-23 15:46:24 as ** along with 1 person APRegier
  • Memory-efficient dynamic programming backtrace and pairwise local sequence alignment
    Bioinformatics (16 June 2008), btn308.
    by Lee A Newberg
    posted to programming dynamic alignment by Neeperando on 2008-06-17 14:58:26 as **
  • Whole-genome alignments and polytopes for comparative genomics
    PhD Thesis (2006)
    by C Dewey
    posted to scaffolding genome comparative alignment by Neeperando on 2008-06-16 18:31:29 as read
  • Measuring Global Credibility with Application to Local Sequence Alignment
    PLoS Comput Biol, Vol. 4, No. 5. (May 2008)
    by Bobbie, Lee A Mccue, Charles E Lawrence
    posted to alignment by Neeperando on 2008-05-28 15:39:51 as ***
  • notes Glocal alignment: finding rearrangements during alignment.
    Bioinformatics, Vol. 19 Suppl 1 (2003)
    by M Brudno, S Malde, A Poliakov, CB Do, O Couronne, I Dubchak, S Batzoglou
    posted to alignment by Neeperando on 2008-05-26 17:48:28 as read along with 1 person sujaikumar
  • Aligning multiple whole genomes with Mercator and MAVID.
    Methods in molecular biology (Clifton, N.J.), Vol. 395 (2007), pp. 221-236.
    by CN Dewey
    posted to alignment by Neeperando on 2008-05-20 21:58:23 as read
  • R-Coffee: a method for multiple alignment of non-coding RNA.
    Nucleic acids research (17 April 2008)
    by Andreas Wilm, Desmond G G Higgins, Cédric Notredame
    posted to alignment by Neeperando on 2008-05-20 17:02:58 as ** along with 2 people marck urgi
  • Multiple whole genome alignments and novel biomedical applications at the VISTA portal.
    Nucleic Acids Res, Vol. 35, No. Web Server issue. (July 2007)
    by M Brudno, A Poliakov, S Minovitsky, I Ratnere, I Dubchak
    posted to alignment by Neeperando on 2008-05-19 16:17:29 as read along with 1 person jyuh
  • LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA.
    Genome Res, Vol. 13, No. 4. (April 2003), pp. 721-731.
    by M Brudno, CB Do, GM Cooper, MF Kim, E Davydov, ED Green, A Sidow, S Batzoglou,
    posted to alignment by Neeperando on 2008-05-19 16:17:03 as ** along with 12 people and 1 group operon balajis dpollard xwbcn dquest adepace hdopazo lusk Garamonfok adijr natstreet nklee EisenLab
  • Mauve: multiple alignment of conserved genomic sequence with rearrangements.
    Genome Res, Vol. 14, No. 7. (July 2004), pp. 1394-1403.
    by AC Darling, B Mau, FR Blattner, NT Perna
    posted to alignment by Neeperando on 2008-05-19 16:16:15 as ** along with 6 people and 1 group mariakmejia operon catmat AaronDarling leelarcombe azazello gatech-compgenomics
  • Fast and sensitive multiple alignment of large genomic sequences.
    BMC bioinformatics, Vol. 4 (23 December 2003)
    by M Brudno, M Chapman, B Göttgens, S Batzoglou, B Morgenstern
    posted to alignment by Neeperando on 2008-05-19 16:15:26 as **
  • Automated whole-genome multiple alignment of rat, mouse, and human.
    Genome Res, Vol. 14, No. 4. (April 2004), pp. 685-692.
    by M Brudno, A Poliakov, A Salamov, GM Cooper, A Sidow, EM Rubin, V Solovyev, S Batzoglou, I Dubchak
    posted to alignment by Neeperando on 2008-05-19 16:14:40 as **** along with 1 person balajis
  • Aligning multiple genomic sequences with the threaded blockset aligner.
    Genome Res, Vol. 14, No. 4. (April 2004), pp. 708-715.
    by M Blanchette, WJ Kent, C Riemer, L Elnitski, AF Smit, KM Roskin, R Baertsch, K Rosenbloom, H Clawson, ED Green, D Haussler, W Miller
    posted to alignment by Neeperando on 2008-05-19 16:12:55 as ** along with 8 people and 1 group AlexanderPico yylin maralena operon ujh indigoviolet csardas djkt EisenLab
  • Efficient multiple genome alignment.
    Bioinformatics (Oxford, England), Vol. 18 Suppl 1 (2002)
    by M Höhl, S Kurtz, E Ohlebusch
    posted to alignment by Neeperando on 2008-05-19 16:11:58 as **
  • MAVID: Constrained Ancestral Alignment of Multiple Sequences
    Genome Res., Vol. 14, No. 4. (1 April 2004), pp. 693-699.
    by Nicolas Bray, Lior Pachter
    posted to alignment by Neeperando on 2008-05-19 16:11:15 as **** along with 2 people operon jmeppley
  • Mulan: multiple-sequence local alignment and visualization for studying function and evolution.
    Genome Res, Vol. 15, No. 1. (January 2005), pp. 184-194.
    by I Ovcharenko, GG Loots, BM Giardine, M Hou, J Ma, RC Hardison, L Stubbs, W Miller
    posted to alignment by Neeperando on 2008-05-19 16:10:30 as ** along with 3 people and 2 groups jwortman eckart_bindewald dchughes G4ID Genetics-of-Gambling
  • Versatile and open software for comparing large genomes.
    Genome Biol, Vol. 5, No. 2. (2004)
    by S Kurtz, A Phillippy, AL Delcher, M Smoot, M Shumway, C Antonescu, SL Salzberg
    posted to whole genome alignment by Neeperando on 2008-05-19 16:09:37 as read along with 3 people AaronDarling michC yoanjacquemin
  • Fast algorithms for large-scale genome alignment and comparison.
    Nucleic Acids Res, Vol. 30, No. 11. (1 June 2002), pp. 2478-2483.
    by AL Delcher, A Phillippy, J Carlton, SL Salzberg
    posted to whole genome alignment by Neeperando on 2008-05-19 16:07:13 as read along with 4 people bozdagd treangen urgi yoanjacquemin
  • Evolution at the nucleotide level: the problem of multiple whole-genome alignment.
    Hum Mol Genet, Vol. 15 Suppl 1 (15 April 2006)
    by CN Dewey, L Pachter
    posted to whole genome alignment by Neeperando on 2008-05-19 16:06:38 as read along with 6 people and 2 groups operon Ayest tny dchughes AaronDarling echinotrix G4ID Genetics-of-Gambling
  • A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins.
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Kevin Brick, Elisabetta Pizzi
    posted to malaria alignment by Neeperando on 2008-05-16 19:43:11 as * along with 2 people pinney barriot
  • PatMaN: rapid alignment of short sequences to large databases
    Bioinformatics (2008)
    by Kay Prufer, Udo Stenzel, Michael Dannemann, Richard E Green, Michael Lachmann, Janet Kelso
    posted to short read alignment by Neeperando on 2008-05-13 20:51:05 as **
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/user/Neeperando/tag/alignment

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