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CitoJam library [59 articles]

最近 CitoJam ordered by to_read.
  • Ontology (Computer Science) - definition in Encyclopedia of Database Systems
    (2008)
    by Thomas Gruber
    edited by Ling Liu, Tamer M Özsu
    posted to gruber-08 by CitoJam on 2008-07-10 03:36:39 as * along with 1 person and 1 group markymaypo ARTFL
  • SGD: Saccharomyces Genome Database.
    Nucleic Acids Res, Vol. 26, No. 1. (1 January 1998), pp. 73-79.
    by JM Cherry, C Adler, C Ball, SA Chervitz, SS Dwight, ET Hester, Y Jia, G Juvik, T Roe, M Schroeder, S Weng, D Botstein
    posted to cherry-97 databases by CitoJam on 2008-07-09 18:21:29 as * along with 5 people and 1 group leechuck irenas RMGraze lusk nklee dbk-lab
  • MGD: the Mouse Genome Database.
    Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 193-195.
    by JA Blake, JE Richardson, CJ Bult, JA Kadin, JT Eppig,
    posted to blake-02 databases by CitoJam on 2008-07-09 18:19:20 as * along with 1 person setar
  • Individual prognosis of diabetes long-term risks: a CBR approach.
    Methods of information in medicine, Vol. 40, No. 1. (March 2001), pp. 46-51.
    by E Armengol, A Palaudàries, E Plaza
    posted to armengol-01b by CitoJam on 2008-07-09 15:59:00 as *
  • Oxford Dictionary of Biochemistry and Molecular Biology
    (24 February 1997)
    by University Oxford
    posted to oxford-97 by CitoJam on 2008-07-09 03:52:43 as *
  • Atlas of protein sequence and structure
    (1965)
    by Margaret O Dayhoff
    posted to dayhoff-65 by CitoJam on 2008-07-09 03:09:51 as *
  • The Sequence of the Human Genome
    Science, Vol. 291, No. 5507. (16 February 2001), pp. 1304-1351.
    by JC Venter, MD Adams, EW Myers, PW Li, RJ Mural, GG Sutton, HO Smith, M Yandell, CA Evans, RA Holt, JD Gocayne, P Amanatides, RM Ballew, DH Huson, JR Wortman, Q Zhang, CD Kodira, XH Zheng, L Chen, M Skupski, G Subramanian, PD Thomas, J Zhang, Gabor GL Miklos, C Nelson, S Broder, AG Clark, J Nadeau, VA Mckusick, N Zinder, AJ Levine, RJ Roberts, M Simon, C Slayman, M Hunkapiller, R Bolanos, A Delcher, I Dew, D Fasulo, M Flanigan, L Florea, A Halpern, S Hannenhalli, S Kravitz, S Levy, C Mobarry, K Reinert, K Remington, J Abu-Threideh, E Beasley, K Biddick, V Bonazzi, R Brandon, M Cargill, I Chandramouliswaran, R Charlab, K Chaturvedi, Z Deng, V Di Francesco, P Dunn, K Eilbeck, C Evangelista, AE Gabrielian, W Gan, W Ge, F Gong, Z Gu, P Guan, TJ Heiman, ME Higgins, RR Ji, Z Ke, KA Ketchum, Z Lai, Y Lei, Z Li, J Li, Y Liang, X Lin, F Lu, GV Merkulov, N Milshina, HM Moore, AK Naik, VA Narayan, B Neelam, D Nusskern, DB Rusch, S Salzberg, W Shao, B Shue, J Sun, Z Wang, A Wang, X Wang, J Wang, M Wei, R Wides, C Xiao, C Yan, A Yao, J Ye, M Zhan, W Zhang, H Zhang, Q Zhao, L Zheng, F Zhong, W Zhong, S Zhu, S Zhao, D Gilbert, S Baumhueter, G Spier, C Carter, A Cravchik, T Woodage, F Ali, H An, A Awe, D Baldwin, H Baden, M Barnstead, I Barrow, K Beeson, D Busam, A Carver, A Center, ML Cheng, L Curry, S Danaher, L Davenport, R Desilets, S Dietz, K Dodson, L Doup, S Ferriera, N Garg, A Gluecksmann, B Hart, J Haynes, C Haynes, C Heiner, S Hladun, D Hostin, J Houck, T Howland, C Ibegwam, J Johnson, F Kalush, L Kline, S Koduru, A Love, F Mann, D May, S Mccawley, T Mcintosh, I Mcmullen, M Moy, L Moy, B Murphy, K Nelson, C Pfannkoch, E Pratts, V Puri, H Qureshi, M Reardon, R Rodriguez, YH Rogers, D Romblad, B Ruhfel, R Scott, C Sitter, M Smallwood, E Stewart, R Strong, E Suh, R Thomas, NN Tint, S Tse, C Vech, G Wang, J Wetter, S Williams, M Williams, S Windsor, E Winn-Deen, K Wolfe, J Zaveri, K Zaveri, JF Abril, R Guigó, MJ Campbell, KV Sjolander, B Karlak, A Kejariwal, H Mi, B Lazareva, T Hatton, A Narechania, K Diemer, A Muruganujan, N Guo, S Sato, V Bafna, S Istrail, R Lippert, R Schwartz, B Walenz, S Yooseph, D Allen, A Basu, J Baxendale, L Blick, M Caminha, J Carnes-Stine, P Caulk, YH Chiang, M Coyne, C Dahlke, A Mays, M Dombroski, M Donnelly, D Ely, S Esparham, C Fosler, H Gire, S Glanowski, K Glasser, A Glodek, M Gorokhov, K Graham, B Gropman, M Harris, J Heil, S Henderson, J Hoover, D Jennings, C Jordan, J Jordan, J Kasha, L Kagan, C Kraft, A Levitsky, M Lewis, X Liu, J Lopez, D Ma, W Majoros, J Mcdaniel, S Murphy, M Newman, T Nguyen, N Nguyen, M Nodell, S Pan, J Peck, M Peterson, W Rowe, R Sanders, J Scott, M Simpson, T Smith, A Sprague, T Stockwell, R Turner, E Venter, M Wang, M Wen, D Wu, M Wu, A Xia, A Zandieh, X Zhu
    posted to human-genome venter-01 by CitoJam on 2008-07-09 02:54:09 as * along with 21 people and 3 groups aramata Cortel jwortman jnemecek bicko Dax42 yas balajis xdeupi arcticrasta dgront olympos incovoma naegele mimulus_99 brant frohike granujilla renatomilani Neeperando sunliu Proteinkinases T_lab LabCompMed
  • G protein-coupled receptor for nicotinic acid in mouse macrophages
    Biochemical Pharmacology, Vol. 64, No. 4. (15 August 2002), pp. 645-648.
    by Anna Lorenzen, Christina Stannek, Anja Burmeister, Ivars Kalvinsh, Ulrich Schwabe
    posted to lorenzen-02 protein-drug by CitoJam on 2008-07-08 10:59:45 as *
  • Protein trafficking abnormalities: a new mechanism in drug-induced long QT syndrome
    Br J Pharmacol, Vol. 145, No. 1. (14 February 2005), pp. 3-4.
    by Lee L Eckhardt, Sridharan Rajamani, Craig T January
    posted to eckhardt-05 protein-drug by CitoJam on 2008-07-08 10:58:41 as *
  • Circumscription---a form of non-monotonic reasoning
    Readings in nonmonotonic reasoning (1987), pp. 145-152.
    by J Mccarthy
    posted to mccarthy-87 philosophy by CitoJam on 2008-05-15 17:58:13 as *
  • notes Building Large Knowledge-Based Systems; Representation and Inference in the Cyc Project
    (1989)
    by Douglas B Lenat, RV Guha
    posted to lenat-90 ontologies by CitoJam on 2008-05-13 19:33:51 as *
  • Similarity
    (1999)
    edited by Robert A Wilson, Frank C Keil
    posted to goldstone-99 wordnet by CitoJam on 2008-05-06 19:55:10 as *
  • WordNet: An Electronic Lexical Database (ISBN: 0-262-06197-X)
    (1998)
    edited by Christian Fellbaum
    posted to fellbaum-98 wordnet by CitoJam on 2008-05-06 19:51:10 as *
  • The Ensembl genome database project
    Nucl. Acids Res., Vol. 30, No. 1. (1 January 2002), pp. 38-41.
    by T Hubbard, D Barker, E Birney, G Cameron, Y Chen, L Clark, T Cox, J Cuff, V Curwen, T Down, R Durbin, E Eyras, J Gilbert, M Hammond, L Huminiecki, A Kasprzyk, H Lehvaslaiho, P Lijnzaad, C Melsopp, E Mongin, R Pettett, M Pocock, S Potter, A Rust, E Schmidt, S Searle, G Slater, J Smith, W Spooner, A Stabenau, J Stalker, E Stupka, A Ureta-Vidal, I Vastrik, M Clamp
    posted to databases hubbard-02 by CitoJam on 2008-04-26 19:23:34 as * along with 4 people and 1 group incovoma kynn raylim rvosa FAB-lab
  • The FlyBase database of the Drosophila genome projects and community literature.
    Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 172-175.
    by Consortium Flybase
    posted to databases fbc-02 by CitoJam on 2008-04-26 19:19:07 as * along with 1 person dragonrez
  • The Protein Information Resource (PIR)
    Nucl. Acids Res., Vol. 28, No. 1. (1 January 2000), pp. 41-44.
    by Winona C Barker, John S Garavelli, Hongzhan Huang, Peter B Mcgarvey, Bruce C Orcutt, Geetha Y Srinivasarao, Chunlin Xiao, Lai-Su L Yeh, Robert S Ledley, Joseph F Janda, Friedhelm Pfeiffer, Hans-Werner Mewes, Akira Tsugita, Cathy Wu
    posted to barker-00 databases by CitoJam on 2008-04-26 13:06:37 as *
  • DNA Data Bank of Japan (DDBJ) in collaboration with mass sequencing teams
    Nucl. Acids Res., Vol. 28, No. 1. (1 January 2000), pp. 24-26.
    by Yoshio Tateno, Satoru Miyazaki, Motonori Ota, Hideaki Sugawara, Takashi Gojobori
    posted to databases tateno-00 by CitoJam on 2008-04-26 13:05:37 as *
  • The EMBL Nucleotide Sequence Database
    Nucl. Acids Res., Vol. 28, No. 1. (1 January 2000), pp. 19-23.
    by Wendy Baker, Alexandra van den Broek, Evelyn Camon, Pascal Hingamp, Peter Sterk, Guenter Stoesser, Mary A Tuli
    posted to baker-00 databases by CitoJam on 2008-04-26 13:04:34 as *
  • GenBank.
    Nucleic Acids Res, Vol. 28, No. 1. (1 January 2000), pp. 15-18.
    by DA Benson, I Karsch-Mizrachi, DJ Lipman, J Ostell, BA Rapp, DL Wheeler
    posted to benson-00 databases by CitoJam on 2008-04-26 13:01:12 as * along with 2 people roland gisle
  • The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000
    Nucl. Acids Res., Vol. 28, No. 1. (1 January 2000), pp. 45-48.
    by Amos Bairoch, Rolf Apweiler
    posted to bairoch-00 databases by CitoJam on 2008-04-26 12:59:50 as *
  • Yeast: an experimental organism for modern biology
    Science, Vol. 240, No. 4858. (10 June 1988), pp. 1439-1443.
    by D Botstein, GR Fink
    posted to botstein-88 eukaryotes by CitoJam on 2008-04-26 12:57:23 as *
  • Genome cross-referencing and XREFdb: implications for the identification and analysis of genes mutated in human disease.
    Nature genetics, Vol. 15, No. 4. (April 1997), pp. 339-344.
    by DE Bassett, MS Boguski, F Spencer, R Reeves, S Kim, T Weaver, P Hieter
    posted to bassett-97 by CitoJam on 2008-04-26 12:56:18 as *
  • Functional homology of mammalian and yeast RAS genes.
    Cell, Vol. 40, No. 1. (January 1985), pp. 19-26.
    by T Kataoka, S Powers, S Cameron, O Fasano, M Goldfarb, J Broach, M Wigler
    posted to eukaryotes kataoka-85 by CitoJam on 2008-04-26 12:55:54 as *
  • Myb-Related Schizosaccharomyces pombe cdc5p Is Structurally and Functionally Conserved in Eukaryotes
    Mol. Cell. Biol., Vol. 18, No. 7. (1 July 1998), pp. 4097-4108.
    by Ryoma Ohi, Anna Feoktistova, Stacey Mccann, Virginia Valentine, Thomas A Look, Joseph S Lipsick, Kathleen L Gould
    posted to eukaryotes ohi-98 by CitoJam on 2008-04-26 12:54:11 as *
  • Conservation of the Caenorhabditis elegans timing gene clk-1 from yeast to human: a gene required for ubiquinone biosynthesis with potential implications for aging
    Mammalian Genome, Vol. 10, No. 10. (21 October 1999), pp. 1000-1004.
    by Zoltan Vajo, Lynn M King, Tanya Jonassen, Douglas J Wilkin, Nicola Ho, Arnold Munnich, Catherine F Clarke, Clair A Francomano
    posted to eukaryotes vajo-99 by CitoJam on 2008-04-26 12:52:32 as *
  • Biochemical and genetic conservation of fission yeast Dsk1 and human SR protein-specific kinase 1.
    Molecular and cellular biology, Vol. 20, No. 3. (February 2000), pp. 816-824.
    by Z Tang, T Kuo, J Shen, RJ Lin
    posted to eukaryotes tang-00 by CitoJam on 2008-04-26 12:51:04 as *
  • Comparative genomics of the eukaryotes.
    Science, Vol. 287, No. 5461. (24 March 2000), pp. 2204-2215.
    by GM Rubin, MD Yandell, JR Wortman, GL Gabor Miklos, CR Nelson, IK Hariharan, ME Fortini, PW Li, R Apweiler, W Fleischmann, JM Cherry, S Henikoff, MP Skupski, S Misra, M Ashburner, E Birney, MS Boguski, T Brody, P Brokstein, SE Celniker, SA Chervitz, D Coates, A Cravchik, A Gabrielian, RF Galle, WM Gelbart, RA George, LS Goldstein, F Gong, P Guan, NL Harris, BA Hay, RA Hoskins, J Li, Z Li, RO Hynes, SJ Jones, PM Kuehl, B Lemaitre, JT Littleton, DK Morrison, C Mungall, PH O'Farrell, OK Pickeral, C Shue, LB Vosshall, J Zhang, Q Zhao, XH Zheng, S Lewis
    posted to eukaryotes rubin-00 by CitoJam on 2008-04-26 12:49:40 as * along with 7 people and 1 group tharris ujh jwortman rebeccahainess gurkanbebek cmor renatomilani C. elegans / WormBase
  • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana.
    Nature, Vol. 408, No. 6814. (14 December 2000), pp. 796-815.
    by Initiative Arabidopsis
    posted to agi-00 genome-sequencing by CitoJam on 2008-04-26 12:31:52 as * along with 9 people and 1 group sdinka ataheri moborg echinotrix timflutre byy ArtemPankin nklee hsekiguc plant-development
  • Genome sequence of the nematode C. elegans: a platform for investigating biology.
    Science, Vol. 282, No. 5396. (11 December 1998), pp. 2012-2018.
    by Consortium C-Elegans-Sequencing
    posted to celegansconsortium-98 genome-sequencing by CitoJam on 2008-04-26 12:28:04 as * along with 9 people min013 sdinka Cortel treangen sujaikumar antonkratz jeanfamily wormbase_ant hsekiguc
  • notes The FlyBase database of the Drosophila Genome Projects and community literature. The FlyBase Consortium.
    Nucleic Acids Res, Vol. 27, No. 1. (1 January 1999), pp. 85-88.
    by Consortium Flybase
    posted to databases flybase by CitoJam on 2008-04-13 23:50:06 as * along with 1 person and 1 group indigoviolet EisenLab
  • Rapid Similarity Searches of Nucleic Acid and Protein Data Banks
    PNAS, Vol. 80, No. 3. (1 February 1983), pp. 726-730.
    by WJ Wilbur, David J Lipman
    posted to fastp wilbur-83 by CitoJam on 2007-08-18 18:40:28 as * along with 1 person creswick
  • Improved tools for biological sequence comparison.
    Proc Natl Acad Sci U S A, Vol. 85, No. 8. (April 1988), pp. 2444-2448.
    by WR Pearson, DJ Lipman
    posted to fastp pearson-88 by CitoJam on 2007-08-18 17:16:05 as * along with 9 people and 2 groups arcticrasta ffranca gurkanbebek bsmagic lusk cjeans sujaikumar Ema bozdagd Bioinformatics bioinplant
  • Rapid and sensitive protein similarity searches.
    Science, Vol. 227, No. 4693. (22 March 1985), pp. 1435-1441.
    by DJ Lipman, WR Pearson
    posted to fastp lipman-85 by CitoJam on 2007-08-18 17:10:28 as * along with 2 people dgront lusk
  • BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences.
    FEMS Microbiol Lett, Vol. 174, No. 2. (15 May 1999), pp. 247-250.
    by TA Tatusova, TL Madden
    posted to blast tatusova-99 by CitoJam on 2007-08-17 16:59:09 as *
  • Bottom-Up Induction of Feature Terms
    Machine Learning, Vol. 41, No. 3. (1 December 2000), pp. 259-294.
    by Eva Armengol, Enric Plaza
    posted to armengol-00 semantic-similarity by CitoJam on 2008-05-06 22:51:28 as **
  • Contextual correlates of semantic similarity
    Language and Cognitive Processes, Vol. 6, No. 1. (1991), pp. 1-28.
    by George A Miller, Walter G Charles
    posted to miller-91 semantic-similarity by CitoJam on 2008-05-06 22:46:47 as **
  • Nouns in WordNet: A Lexical Inheritance System
    Int J Lexicography, Vol. 3, No. 4. (1 January 1990), pp. 245-264.
    by George A Miller
    posted to miller-90b semantic-similarity wordnet by CitoJam on 2008-05-06 22:38:20 as **
  • Word sense disambiguation for free-text indexing using a massive semantic network
    (1993), pp. 67-74.
    by Michael Sussna
    posted to semantic-similarity sussna-93 wordnet by CitoJam on 2008-05-06 22:28:32 as **
  • An Information Model for Genome Map Representation and Assembly
    (1993), pp. 75-84.
    by AJ Lee, EA Rundensteiner, SW Thomas, S Lafortune
    posted to lee-93 semantic-similarity wordnet by CitoJam on 2008-05-06 22:27:11 as **
  • Using WordNet as a Knowledge Base for measuring semantic similarity between words
    No. CA-1294. (1994)
    by Ray Richardson, Alan F Smeaton, J Murphy
    posted to richardson-94 semantic-similarity wordnet by CitoJam on 2008-05-06 22:25:52 as **
  • Development and application of a metric on semantic nets
    Systems, Man and Cybernetics, IEEE Transactions on, Vol. 19, No. 1. (1989), pp. 17-30.
    by R Rada, H Mili, E Bicknell, M Blettner
    posted to rada-89b semantic-similarity wordnet by CitoJam on 2008-05-06 20:11:51 as ** along with 2 people and 2 groups ejmeij Wurlitzer ilps LanguageModeling
  • Ranking documents with a thesaurus.
    Journal of the American Society for Information Science. American Society for Information Science, Vol. 40, No. 5. (September 1989), pp. 304-310.
    by R Rada, E Bicknell
    posted to rada-89 semantic-similarity wordnet by CitoJam on 2008-05-06 20:11:02 as **
  • Introduction to WordNet: An On-line Lexical Database*
    Int J Lexicography, Vol. 3, No. 4. (1 January 1990), pp. 235-244.
    by George A Miller, Richard Beckwith, Christiane Fellbaum, Derek Gross, Katherine J Miller
    posted to miller-90 wordnet by CitoJam on 2008-05-06 19:57:12 as ** along with 4 people jcampos Wurlitzer briordan iansimon
  • notes A methodology to migrate the gene ontology to a description logic environment using DAML+OIL.
    Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2003), pp. 624-635.
    by CJ Wroe, R Stevens, CA Goble, M Ashburner
    posted to gene-ontology wroe-03 by CitoJam on 2008-04-26 19:26:05 as **
  • It's all GO for plant scientists.
    Plant physiology, Vol. 138, No. 3. (July 2005), pp. 1268-1279.
    by JI Clark, C Brooksbank, J Lomax
    posted to clark-05 gene-ontology by CitoJam on 2008-04-13 20:32:54 as **
  • An evaluation of GO annotation retrieval for BioCreAtIvE and GOA.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by EB Camon, DG Barrell, EC Dimmer, V Lee, M Magrane, J Maslen, D Binns, R Apweiler
    posted to camon-05 gene-ontology by CitoJam on 2008-04-13 20:31:37 as ** along with 4 people and 2 groups yas helliontroy adoms yggdrasil T_lab biomedical-nlp
  • The Universal Protein Resource (UniProt).
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by Consortium Uniprot
    posted to uniprot by CitoJam on 2007-08-19 17:17:57 as ** along with 7 people jyuh dullhunk massivemayhem cjeans saunders sim82 sgoetz
  • Semantic Similarity Based on Corpus Statistics and Lexical Taxonomy
    (September 1997), 9008.
    by JJ Jiang, DW Conrath
    posted to jiang-97 semantic-similarity by CitoJam on 2006-11-07 14:55:17 as ** along with 4 people and 2 groups ejmeij iris_2001 Wurlitzer sgoetz ilps LanguageModeling
  • notes Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
    Nucleic Acids Res, Vol. 25, No. 17. (1 September 1997), pp. 3389-3402.
    by SF Altschul, TL Madden, AA Schäffer, J Zhang, Z Zhang, W Miller, DJ Lipman
    posted to altschul-97 blast by CitoJam on 2006-11-03 16:30:10 as ** along with 46 people and 4 groups pwais dakelley knaseanka setar iakes miguel kaarsinogen bjorns bicko jmeppley chad_davis balajis nuke2005 eweaver david_parsons indigoviolet dullhunk robert dgront happy_manatee caporaso treangen kengg manzanita leelarcombe jdelcampo aengisch rabio massivemayhem mirzazadeh azazello sujaikumar beatrizfernandez GustavoLacerda siebertm adijr viktor21614 mijam grottenolm bandrewfox edvin newton1234 mariakmejia granujilla marti CharlesM EisenLab biomedical-nlp Microbial-Ecology Plantandetc
  • notes Basic local alignment search tool.
    J Mol Biol, Vol. 215, No. 3. (5 October 1990), pp. 403-410.
    by SF Altschul, W Gish, W Miller, EW Myers, DJ Lipman
    posted to altschul-90 blast by CitoJam on 2006-11-03 16:27:04 as ** along with 45 people and 6 groups pwais mmartin tharris dmp camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg indigoviolet moborg arcticrasta dullhunk dgront caporaso michC myui BioNica rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel Thaverkamp shung marti hervelequere ashaytan benwei granujilla C. elegans / WormBase dbk-lab EisenLab T_lab biomedical-nlp Microbial-Ecology
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