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タグ: turnover [37 articles]

Recent papers classified by the tag turnover.
  • Phylogenetic Simulation of Promoter Evolution: Estimation and Modeling of Binding Site Turnover Events and Assessing Their Impact on Alignment Tools
    Genome Biology, Vol. 8 (24 October 2007), R225.
    by Weichun Huang, Joseph R Nevins, Uwe Ohler
    posted to binding_site promotor turnover by stajich on 2007-10-29 01:04:01 as **** along with 4 people and 2 groups dpollard djkt Garamonfok maximilianh EisenLab cis-regulatory-evolution
  • Versatile applications of transcriptional pulsing to study mRNA turnover in mammalian cells.
    RNA (29 August 2007)
    by Chyi-Ying A Y Chen, Yukiko Yamashita, Tsung-Cheng C Chang, Akio Yamashita, Wenmiao Zhu, Zhenping Zhong, Ann-Bin B Shyu
    posted to mrna turnover by sebastien_vigneau on 2007-09-01 19:46:31 as **
  • notes Climate change threats to plant diversity in Europe.
    Proc Natl Acad Sci U S A, Vol. 102, No. 23. (7 June 2005), pp. 8245-8250.
    by W Thuiller, S Lavorel, MB Araújo, MT Sykes, IC Prentice
    posted to climate climate_change diversity eaf europe extinction ipcc model niche-based panel species storylines tuller turnover by satbiod on 2007-01-08 11:08:14 as ** along with 3 people and 4 groups Flit marimo luth MathBio biodiversity_conservation Global_biodiversity_model Climate Change
  • Cerebral lactate turnover after electroshock: In vivo measurements by 1H/13C magnetic resonance spectroscopy
    Journal of Cerebral Blood Flow and Metabolism, Vol. 12, No. 6. (1992), pp. 1022-1029.
    by OAC Petroff, EJ Novotny, M Avison, DL Rothman, JR Alger, T Ogino, GI Shulman, JW Prichard
    posted to 13c brain lactate metabolism stroke turnover by samoday on 2008-05-05 14:20:33 as **
  • Localized proton NMR observation of [3-13C]lactate in stroke after [1-13C]glucose infusion
    Magnetic Resonance in Medicine, Vol. 21, No. 2. (1991), pp. 302-307.
    by DL Rothman, AM Howseman, GD Graham, OAC Petroff, G Lantos, PB Fayad, LM Brass, GI Shulman, RG Shulman, JW Prichard
    posted to 13c brain glycolysis lactate stroke turnover by samoday on 2008-05-05 14:22:33 as **
  • Close sequence comparisons are sufficient to identify human cis-regulatory elements.
    Genome Res (12 June 2006)
    by Shyam Prabhakar, Francis Poulin, Malak Shoukry, Veena Afzal, Edward M M Rubin, Olivier Couronne, Len A A Pennacchio
    posted to alignment annotation conserved constraint evolution footprinting human mammal mammals no-tag prediction rate selection tfbs transcription turnover by samal on 2006-08-22 05:18:32 as ** along with 8 people and 2 groups indigoviolet dpollard nickluscombe olympos emptyhb bpcusack mariakmejia kcrawlik EisenLab EBI-regulation
  • Tree Community Change across 700 km of Lowland Amazonian Forest from the Andean Foothills to Brazil
    Biotropica, Vol. 40, No. 5. (September 2008), pp. 525-535.
    by Pitman, CA Nigel, Mogollon, Hugo, Davila, Nallarett, Rios, Marcos, Garcia-Villacorta, Roosevelt, Guevara, Juan, Baker, R Timothy, Monteagudo, Abel, Phillips, L Oliver, Vasquez-Martinez, Rodolfo, Ahuite, Manuel, Aulestia, Milton, Cardenas, Dairon, Ceron, E Carlos, Loizeau, Pierre-Andre, Neill, A David, V Nunez, Percy, Palacios, A Walter, Spichiger, Rodolphe, Valderrama, Elvis
    posted to amazon biogeography compositional ecuador iquitos national park peru turnover yasun by phig on 2008-08-24 17:55:36 as **
  • A novel BH3 ligand that selectively targets Mcl-1 reveals that apoptosis can proceed without Mcl-1 degradation
    J. Cell Biol., Vol. 180, No. 2. (28 January 2008), pp. 341-355.
    by Erinna F Lee, Peter E Czabotar, Mark F van Delft, Ewa M Michalak, Michelle J Boyle, Simon N Willis, Hamsa Puthalakath, Philippe Bouillet, Peter M Colman, David C Huang, Douglas W Fairlie
    posted to apoptosis mcl-1 turnover by paulschlesinger on 2008-02-19 00:50:10 as **
  • Functional Evolution of a cis-Regulatory Module
    PLoS Biology, Vol. 3, No. 4. (1 April 2005), e93.
    by Michael Z Ludwig, Arnar Palsson, Elena Alekseeva, Casey M Bergman, Janaki Nathan, Martin Kreitman
    posted to functional peering turnover by mimulus_99 on 2007-09-24 00:03:13 as ** along with 4 people and 3 groups blobbybirdman cisevol brant emptyhb UH - Computational Biology cis-regulatory-evolution Myxo group
  • Cyclic, Proteasome-Mediated Turnover of Unliganded and Liganded ER[alpha] on Responsive Promoters Is an Integral Feature of Estrogen Signaling
    Molecular Cell, Vol. 11, No. 3. (March 2003), pp. 695-707.
    by George Reid, Michael R Hübner, Raphaël Métivier, Heike Brand, Stefanie Denger, Dominique Manu, Joël Beaudouin, Jan Ellenberg, Frank Gannon
    posted to estrogen-receptor proteosome transcription turnover by mapplab on 2008-07-21 16:56:05 as **
  • A stochastic model for the evolution of transcription factor binding site abundance.
    J Theor Biol (7 March 2007)
    by Günter P P Wagner, Wolfgang Otto, Vincent Lynch, Peter F F Stadler
    posted to turnover model binding_site by dpollard to the group EisenLab on 2007-05-23 01:02:56 as ***** along with 1 person and 1 group cisevol cis-regulatory-evolution
  • Evidence for turnover of functional noncoding DNA in mammalian genome evolution.
    Genomics, Vol. 84, No. 5. (November 2004), pp. 806-813.
    by NG Smith, M Brandström, H Ellegren
    posted to turnover by devin to the group EisenLab on 2007-02-09 20:07:10 as read along with 2 people and 1 group dpollard cisevol cis-regulatory-evolution
  • Evolutionary turnover of mammalian transcription start sites.
    Genome Res (10 May 2006)
    by Martin C C Frith, Jasmina Ponjavic, David Fredman, Chikatoshi Kai, Jun Kawai, Piero Carninci, Yoshihide Hayshizaki, Albin Sandelin
    posted to alignment conserved evolution gene mammal promoter transcription turnover vertebrate by dpollard to the group EisenLab on 2006-05-12 17:41:10 as ** along with 4 people and 2 groups cmm jsnoddy cisevol gjuggler FAB-lab cis-regulatory-evolution
  • Consistent Patterns of Rate Asymmetry and Gene Loss Indicate Widespread Neofunctionalization of Yeast Genes After Whole-Genome Duplication
    Genetics, Vol. 175, No. 3. (1 March 2007), pp. 1341-1350.
    by Kevin P Byrne, Kenneth H Wolfe
    posted to variation turnover rate genome gene duplication by dpollard to the group EisenLab on 2007-03-26 08:01:28 as ** along with 3 people gjuggler echinotrix stajich
  • Dynamics of replication-independent histone turnover in budding yeast.
    Science, Vol. 315, No. 5817. (9 March 2007), pp. 1405-1408.
    by MF Dion, T Kaplan, M Kim, S Buratowski, N Friedman, OJ Rando
    posted to turnover round_robin promoter lenny_presented in_depth_suggestion eisen_journal_club chromatin by dpollard to the group EisenLab on 2007-03-23 19:12:16 as ** along with 1 person epigenetics
  • Repeated morphological evolution through cis-regulatory changes in a pleiotropic gene
    Nature, Vol. 440, No. 7087., pp. 1050-1053.
    by Benjamin Prud'homme, Nicolas Gompel, Antonis Rokas, Victoria A Kassner, Thomas M Williams, Shu-Dan Yeh, John R True, Sean B Carroll
    posted to adaptive binding crm development drosophila expression gene insect phylogeny turnover by dpollard to the group EisenLab on 2006-11-06 23:55:32 as read along with 8 people RMGraze balicea tny adepace ranb Garamonfok blobbybirdman emptyhb
  • Dynamics and function of intron sequences of the wingless gene during the evolution of the Drosophila genus.
    Evol Dev, Vol. 6, No. 5. (t 2004), pp. 325-335.
    by J Costas, PS Pereira, CP Vieira, S Pinho, J Vieira, F Casares
    posted to cis_regulatory_elements drosophila expression_divergence expression_pattern turnover by dpollard to the group EisenLab on 2007-11-21 01:23:45 as read along with 1 group cis-regulatory-evolution
  • Conserved sequences and the evolution of gene regulatory signals.
    Curr Opin Genet Dev, Vol. 15, No. 6. (December 2005), pp. 628-633.
    by MD Adams
    posted to binding_site evolution regulatory_sequence transcription_factor turnover variation by dpollard to the group EisenLab on 2007-03-15 00:22:24 as *** along with 2 people cconboy lusk
  • Evolutionary population genetics of promoters: Predicting binding sites and functional phylogenies.
    Proc Natl Acad Sci U S A, Vol. 102, No. 44. (1 November 2005), pp. 15936-15941.
    by V Mustonen, M Lässig
    posted to binding evolution polymorphism promoter selection transcription turnover by dpollard to the group EisenLab on 2006-06-10 00:48:36 as **** along with 4 people and 1 group kaarsinogen lusk cisevol emptyhb cis-regulatory-evolution
  • Frequent Gain and Loss of Functional Transcription Factor Binding Sites
    PLoS Computational Biology, Vol. 3, No. 5. (1 May 2007), e99.
    by Scott W Doniger, Justin C Fay
    posted to yeast turnover round_robin rich_presented eisen_journal_club dynamics binding_site by dpollard to the group EisenLab on 2007-06-04 22:33:14 as *** along with 7 people and 1 group brant sebastien_vigneau zwang maximilianh cisevol xili03 emptyhb cis-regulatory-evolution
  • Turnover of binding sites for transcription factors involved in early Drosophila development.
    Gene, Vol. 310 (22 May 2003), pp. 215-220.
    by J Costas, F Casares, J Vieira
    posted to binding_site cis_regulatory_elements drosophila turnover by dpollard to the group EisenLab on 2007-11-21 01:22:24 as read along with 1 person and 1 group cisevol cis-regulatory-evolution
  • Detection of the signature of natural selection in humans: evidence from the Duffy blood group locus.
    Am J Hum Genet, Vol. 66, No. 5. (May 2000), pp. 1669-1679.
    by MT Hamblin, A Di Rienzo
    posted to binding_site cis_regulatory_elements regulatory_evolution regulatory_polymorphism regulatory_sequence_evolution turnover by dpollard to the group EisenLab on 2007-12-05 22:53:19 as *** along with 1 group cis-regulatory-evolution
  • Disruption of a GATA motif in the Duffy gene promoter abolishes erythroid gene expression in Duffy-negative individuals.
    Nat Genet, Vol. 10, No. 2. (June 1995), pp. 224-228.
    by C Tournamille, Y Colin, JP Cartron, C Le Van Kim
    posted to binding_site cis_regulatory_elements regulatory_evolution regulatory_polymorphism regulatory_sequence_evolution turnover by dpollard to the group EisenLab on 2007-12-05 22:51:02 as *** along with 1 group cis-regulatory-evolution
  • Protein exchange dynamics at chemoreceptor clusters in Escherichia coli
    Proceedings of the National Academy of Sciences, Vol. 105, No. 17. (29 April 2008), pp. 6403-6408.
    by Sonja Schulmeister, Michaela Ruttorf, Sebastian Thiem, David Kentner, Dirk Lebiedz, Victor Sourjik
    posted to diffusion dynamics exchange frap protein turnover by gabe_rosser on 2008-07-25 12:14:37 as ** along with 1 person marck
  • Stoichiometry and turnover in single, functioning membrane protein complexes
    Nature (13 September 2006)
    by Mark C Leake, Jennifer H Chandler, George H Wadhams, Fan Bai, Richard M Berry, Judith P Armitage
    posted to bacterial flagellar motor turnover by gabe_rosser on 2008-07-21 00:20:39 as read along with 2 people chrn balabu
  • Analysis of Binding Reactions by Fluorescence Recovery after Photobleaching
    Biophys. J., Vol. 86, No. 6. (1 June 2004), pp. 3473-3495.
    by Brian L Sprague, Robert L Pego, Diana A Stavreva, James G Mcnally
    posted to binding diffusion exchange frap turnover by gabe_rosser on 2008-07-25 14:43:33 as ** along with 1 person mattis23
  • Factors associated with intended staff turnover and job search behaviour in services for people with intellectual disability
    Journal of Intellectual Disability Research, Vol. 45, No. 3. (2001), pp. 258-270.
    by C Hatton, E Emerson, M Rivers, H Mason, R Swarbrick, L Mason, C Kiernan, D Reeves, A Alborz
    posted to staff turnover by emmacook on 2007-11-26 14:36:01 as read
  • Ancient and Recent Positive Selection Transformed Opioid cis-Regulation in Humans.
    PLoS Biol, Vol. 3, No. 12. (15 November 2005)
    by Matthew V V Rockman, Matthew W W Hahn, Nicole Soranzo, Fritz Zimprich, David B B Goldstein, Gregory A A Wray
    posted to binding_site cis_regulatory_elements human regulatory_evolution regulatory_polymorphism regulatory_sequence_evolution turnover by dpollard on 2007-12-05 22:55:41 as read along with 8 people and 3 groups imouthesmp indigoviolet Archaeogenetics happy_manatee djkt mgaldzic cisevol jphekman EisenLab CHIP cis-regulatory-evolution
  • Regulation of Body Pigmentation by the Abdominal-B Hox Protein and Its Gain and Loss in Drosophila Evolution
    Cell, Vol. 125, No. 7. (30 June 2006), pp. 1387-1399.
    by Sangyun Jeong, Antonis Rokas, Sean B Carroll
    posted to binding_site cis_regulatory_elements pigmentation regulatory_evolution regulatory_sequence_evolution turnover by dpollard on 2007-12-05 22:44:47 as read along with 1 person and 2 groups emilyhare EisenLab cis-regulatory-evolution
  • Chance caught on the wing: cis-regulatory evolution and the origin of pigment patterns in Drosophila.
    Nature, Vol. 433, No. 7025. (3 February 2005), pp. 481-487.
    by N Gompel, B Prud'homme, PJ Wittkopp, VA Kassner, SB Carroll
    posted to binding_site cis_regulatory_elements drosophila pigmentation regulatory_evolution regulatory_sequence_evolution turnover by dpollard on 2007-12-05 22:48:37 as read along with 5 people and 2 groups emilyhare adepace cisevol emptyhb pradiptaray EisenLab cis-regulatory-evolution
  • Top Management Team Turnover as an Adaptation Mechanism: The Role of the Environment
    Strategic Management Journal, Vol. 14, No. 7. (1993), pp. 485-504.
    by Margarethe F Wiersema, Karen A Bantel
    posted to turnover top team mechanism management environment adaptation by derchao on 2008-09-02 07:57:30 as **
  • Assessing connectivity of estuarine fishes based on stable isotope ratio analysis
    Estuarine, Coastal and Shelf Science, Vol. 64, No. 1. (July 2005), pp. 58-69.
    by Sharon Z Herzka
    posted to d13c isotopes stable turnover by cjharrod on 2005-06-24 17:29:39 as *****
  • Evidence for stabilizing selection in a eukaryotic enhancer element
    Nature, Vol. 403, No. 6769. (3 February 2000), pp. 564-567.
    by Michael Z Ludwig, Casey Bergman, Nipam H Patel, Martin Kreitman
    posted to enhancer evolution thesis turnover by brant on 2008-04-25 11:09:35 as ** along with 3 people and 1 group ranb cisevol emptyhb cis-regulatory-evolution
  • Turnover of binding sites for transcription factors involved in early Drosophila development
    Gene, Vol. 310 (22 May 2003), pp. 215-220.
    by Javier Costas, Fernando Casares, Jorge Vieira
    posted to binding binding_site site turnover by brant on 2008-08-04 15:20:55 as **
  • Nuclear RNA Turnover
    Cell, Vol. 108, No. 4. (22 February 2002), pp. 431-434.
    by Melissa J Moore
    posted to degradation nmd nuclear rna turnover by bertelsen on 2008-04-18 21:38:04 as ***
  • Kinetics of central nervous system microglial and macrophage engraftment: analysis using a transgenic bone marrow transplantation model.
    Blood, Vol. 90, No. 3. (1 August 1997), pp. 986-993.
    by DW Kennedy, JL Abkowitz
    posted to bmt bone kc kinetics kupffer macrophage marrow microglia transplantation turnover by amromeo on 2008-06-04 23:07:58 as **
  • Origin of dendritic cells in peripheral lymphoid organs of mice
    Nature Immunology, Vol. 8, No. 6. (22 April 2007), pp. 578-583.
    by Kang Liu, Claudia Waskow, Xiangtao Liu, Kaihui Yao, Josephine Hoh, Michel Nussenzweig
    posted to dc nussenzweig parabiosis turnover by amromeo on 2008-04-25 18:23:36 as **
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