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タグ: tandem [47 articles]

Recent papers classified by the tag tandem.
  • Mid-infrared ZGP OPO pumped by near-degenerate narrowband type-I PPKTP parametric oscillator
    Applied Physics B: Lasers and Optics, Vol. 88, No. 1. (4 June 2007), pp. 37-41.
    by M Henriksson, M Tiihonen, V Pasiskevicius, F Laurell
    posted to opo tandem by shiaurys on 2007-07-14 23:30:16 as *****
  • Noncritically phase matched mid-infrared generation in AgGaSe<sub>2 </sub>
    Selected Topics in Quantum Electronics, IEEE Journal of, Vol. 1, No. 1. (1995), pp. 44-49.
    by H Komine, JM Fukumoto, WH Long, EA Stappaerts
    posted to opo tandem by shiaurys on 2007-07-15 00:04:30 as **
  • Paramutation of the r1 locus of maize is associated with increased cytosine methylation.
    Genetics, Vol. 148, No. 4. (April 1998), pp. 1973-1981.
    by EL Walker
    posted to tandem by saru on 2007-08-24 08:45:07 as **
  • Genomic structure and differential expression of two tandem-arranged GSTZ genes in rice
    Gene, Vol. 335 (23 June 2004), pp. 141-149.
    by Tokuji Tsuchiya, Toshikazu Takesawa, Hiroyuki Kanzaki, Ikuo Nakamura
    posted to tandem by saru on 2007-08-24 08:00:51 as **
  • Transposon-mediated chromosomal rearrangements and gene duplications in the formation of the maize R-r complex.
    EMBO J, Vol. 14, No. 10. (15 May 1995), pp. 2350-2363.
    by EL Walker, TP Robbins, TE Bureau, J Kermicle, SL Dellaporta
    posted to tandem by saru on 2007-08-24 08:37:54 as **
  • Immune dominance of Trypanosoma cruzi tandem repeat proteins.
    Infection and immunity (14 July 2008)
    by Yasuyuki Goto, Darrick Carter, Steven G G Reed
    posted to antigens cruzi repeat tandem trypanosoma by santiago on 2008-08-19 19:59:20 as read
  • Tandem repeats in the CpG islands of imprinted genes.
    Genomics, Vol. 88, No. 3. (September 2006), pp. 323-332.
    by B Hutter, V Helms, M Paulsen
    posted to cgi comparative dmr epigenetics evolution genomics human imprinting mouse repeat tandem by rschulz on 2007-12-10 12:04:54 as ** along with 1 person clearbluespring
  • Comparative analyses of human single- and multilocus tandem repeats.
    Genetics, Vol. 179, No. 3. (July 2008), pp. 1693-1704.
    by D Ames, N Murphy, T Helentjaris, N Sun, V Chandler
    posted to tandem repeat imprinting by rschulz on 2008-09-22 10:17:21 as **
  • Size and number of tandem repeat arrays can determine somatic homologous pairing of transgene loci mediated by epigenetic modifications in Arabidopsis thaliana nuclei.
    Chromosoma, Vol. 117, No. 3. (June 2008), pp. 267-276.
    by G Jovtchev, K Watanabe, A Pecinka, FM Rosin, MF Mette, E Lam, I Schubert
    posted to tandem repeat pairing dna-methylation cpg chromosome by rschulz on 2008-09-30 09:45:58 as **
  • Imprinting mechanisms.
    Genome Res, Vol. 8, No. 9. (September 1998), pp. 881-900.
    by M Constância, B Pickard, G Kelsey, W Reik
    posted to epigenetics feature imprinting mechanism repeat sequence tandem transgene by rschulz on 2007-12-10 11:59:28 as **
  • Genes with internal repeats require the THO complex for transcription.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 39. (26 September 2006), pp. 14423-14428.
    by V Voynov, KJ Verstrepen, A Jansen, VM Runner, S Buratowski, GR Fink
    posted to repeat tandem tho transcription by rschulz on 2008-06-26 09:42:01 as **
  • Replication slippage versus point mutation rates in short tandem repeats of the human genome.
    Mol Genet Genomics, Vol. 279, No. 1. (January 2008), pp. 53-61.
    by D Pumpernik, B Oblak, B Borstnik
    posted to repeat tandem variation by RichardDurbin on 2008-03-11 14:46:39 as **
  • The genome-wide determinants of human and chimpanzee microsatellite evolution.
    Genome Res (21 November 2007)
    by Yogeshwar D D Kelkar, Svitlana Tyekucheva, Francesca Chiaromonte, Kateryna D D Makova
    posted to repeat tandem variation by RichardDurbin on 2008-03-11 14:45:36 as ** along with 3 people balicea djkt ryanraaum
  • Tandem repeats over the edit distance.
    Bioinformatics, Vol. 23, No. 2. (15 January 2007)
    by D Sokol, G Benson, J Tojeira
    posted to bioinformatics genomics repeats tandem by operon on 2007-03-28 21:11:04 as ***** along with 1 person mtagaya
  • Faults, symptoms, and software fault tolerance in the Tandem GUARDIAN90 operating system
    Fault-Tolerant Computing, 1993. FTCS-23. Digest of Papers., The Twenty-Third International Symposium on (1993), pp. 20-29.
    by I Lee, RK Iyer
    posted to failures logs tandem by oliner on 2006-07-06 16:33:00 as read along with 1 person and 3 groups rahul SRL sucs logmining
  • notes Error/failure analysis using event logs from fault tolerant systems
    Fault-Tolerant Computing, 1991. FTCS-21. Digest of Papers., Twenty-First International Symposium (1991), pp. 10-17.
    by I Lee, RK Iyer, D Tang
    posted to failures logs tandem by oliner on 2006-07-06 16:29:32 as read along with 2 groups sucs logmining
  • Comparison of Mascot and X!Tandem Performance for Low and High Accuracy Mass Spectrometry and the Development of an Adjusted Mascot Threshold
    Mol Cell Proteomics, Vol. 7, No. 5. (1 May 2008), pp. 962-970.
    by Markus Brosch, Sajani Swamy, Tim Hubbard, Jyoti Choudhary
    posted to tandem-mass-spectrometry tandem proteomics peptide-identification-statistics peptide-identification mascot by nedwards on 2008-10-03 16:56:18 as ** along with 2 people olberd brianb
  • General framework for developing and evaluating database scoring algorithms using the TANDEM search engine.
    Bioinformatics, Vol. 22, No. 22. (15 November 2006), pp. 2830-2832.
    by B MacLean, JK Eng, RC Beavis, M McIntosh
    posted to peptide-identification proteomics proteomics-software tandem tandem-mass-spectrometry by nedwards on 2007-08-08 15:13:45 as **
  • TANDEM: matching proteins with tandem mass spectra.
    Bioinformatics, Vol. 20, No. 9. (12 June 2004), pp. 1466-1467.
    by R Craig, RC Beavis
    posted to peptide-identification proteomics proteomics-software tandem tandem-mass-spectrometry by nedwards on 2007-08-08 15:14:42 as **
  • Denitrification at extremely high pH values by the alkaliphilic, obligately chemolithoautotrophic, sulfur-oxidizing bacterium Thioalkalivibrio denitrificans strain ALJD.
    Archives of microbiology, Vol. 175, No. 2. (February 2001), pp. 94-101.
    by DY Sorokin, JG Kuenen, MS Jetten
    posted to alkaline denitrification extreme interaction ph tandem by mjetten on 2008-04-11 19:06:19 as read along with 2 groups anammox microbiology_nijmegen
  • Convergent evolution of clustering of Iroquois homeobox genes across metazoans.
    Molecular biology and evolution (9 May 2008)
    by Manuel Irimia, Ignacio Maeso, Jordi Garcia-Fernàndez
    posted to copy-number-variation duplicates synteny tandem by maximilianh on 2008-05-17 10:01:23 as ** along with 1 person fhsantanna
  • All duplicates are not equal: the difference between small-scale and genome duplication.
    Genome Biol, Vol. 8, No. 10. (4 October 2007)
    by Luke Hakes, John W Pinney, Simon C Lovell, Steve G Oliver, David L Robertson
    posted to duplicates tandem by maximilianh on 2007-11-04 00:19:14 as ** along with 1 person dullhunk
  • A genome-wide view of the spectrum of spontaneous mutations in yeast.
    Proceedings of the National Academy of Sciences of the United States of America (26 June 2008)
    by Michael Lynch, Way Sung, Krystalynne Morris, Nicole Coffey, Christian R R Landry, Erik B B Dopman, W Joseph J Dickinson, Kazufusa Okamoto, Shilpa Kulkarni, Daniel L L Hartl, W Kelley K Thomas
    posted to duplicates geneorder mutations tandem by maximilianh on 2008-07-03 11:09:59 as ** along with 1 person stevanspringer
  • Evidence that strong positive selection drives neofunctionalization in the tandemly duplicated polyhomeotic genes in Drosophila
    Proceedings of the National Academy of Sciences (1 April 2008), 0710892105.
    by Steffen Beisswanger, Wolfgang Stephan
    posted to duplicates tandem by maximilianh on 2008-04-09 14:44:35 as ** along with 3 people oelemento gjuggler smbe2008
  • Subfunctionalization of Duplicated Zebrafish pax6 Genes by cis-Regulatory Divergence
    PLoS Genetics, Vol. 4, No. 2. (1 February 2008), e29.
    by Dirk A Kleinjan, Ruth M Bancewicz, Philippe Gautier, Ralf Dahm, Helia B Schonthaler, Giuseppe Damante, Anne Seawright, Ann M Hever, Patricia L Yeyati, Veronica van Heyningen, Pedro Coutinho
    posted to cns-differences duplicates synteny tandem by maximilianh on 2008-06-05 23:41:15 as ** along with 4 people brant gjuggler emptyhb Stew
  • Proteomics/genomics and signaling in lymphocytes
    Current Opinion in Immunology, Vol. 16, No. 3. (June 2004), pp. 337-344.
    by Bernd Wollscheid, Julian D Watts, Ruedi Aebersold
    posted to acids affinity amino cell coded culture icat in interference isotope labeling purification rna rnai silac stable tag tandem tap with by marie-aline on 2007-08-28 12:58:44 as read along with 1 person and 1 group Fsilvestre ecotoxurbo
  • Tandem repeats over the edit distance
    Bioinformatics, Vol. 23, No. 2. (15 January 2007), pp. e30-e35.
    by Sokol, Dina, Benson, Gary, Tojeira, Justin
    posted to repeat tandem by joavah on 2008-01-30 19:19:17 as **
  • Genetic Absolute Dating Based on Microsatellites and the Origin of Modern Humans
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 92, No. 15. (1995), pp. 6723-6727.
    by DB Goldstein, Ruiz A Linares, LL Cavalli-Sforza, MW Feldman
    posted to human loci model mutation origins out-of-africa phylogeny repeat stepwise tandem theory by JMCpaniscus on 2008-04-01 11:16:38 as **
  • A global map of p53 transcription-factor binding sites in the human genome.
    Cell, Vol. 124, No. 1. (13 January 2006), pp. 207-219.
    by CL Wei, Q Wu, VB Vega, KP Chiu, P Ng, T Zhang, A Shahab, HC Yong, Y Fu, Z Weng, J Liu, XD Zhao, JL Chew, YL Lee, VA Kuznetsov, WK Sung, LD Miller, B Lim, ET Liu, Q Yu, HH Ng, Y Ruan
    posted to binding global ligation map p53 tag tandem transcription by jackjackjjj on 2006-10-27 05:11:15 as ** along with 11 people and 1 group drestion kaarsinogen jfr balajis tabu vega kengg jtomasch karfunkel maralena bozdagd Plantandetc
  • The Ensembl Automatic Gene Annotation System
    Genome Res., Vol. 14, No. 5. (1 May 2004), pp. 942-950.
    by V Curwen, E Eyras, TD Andrews, L Clarke, E Mongin, SMJ Searle, M Clamp
    posted to acid alignment amino animals anopheles automation biology caenorhabditis computational dna dosage expressed gene genes genome helminth homology human humans insect mice of predictive proteins pseudogenes rats regions repeat sequence sequences software tags tandem tests untranslated value by incovoma on 2007-07-29 20:48:58 as ** along with 3 people and 1 group indigoviolet nicholso maximilianh EisenLab
  • Four new cases of inverted terminal duplication: a modified hypothesis of mechanism of origin.
    Am J Med Genet, Vol. 58, No. 4. (25 September 1995), pp. 299-304.
    by JJ Hoo, M Chao, K Szego, M Rauer, SC Echiverri, C Harris
    posted to duplication inverted tandem by breden to the group FAB-lab on 2006-08-16 16:49:33 as ** along with 1 group SFUAntibodyResearch
  • Tandem duplication of nucleolus organizer region (NOR) in the Japanese macaque, Macaca fuscata fuscata
    pp. 191-197.
    by Hirai, H.
    posted to duplication inverted tandem by breden to the group FAB-lab on 2006-08-16 16:15:03 as ** along with 1 group SFUAntibodyResearch
  • The origin of inverted tandem duplications, and phenotypic effects of tandem duplication of the X chromosome long arm.
    Am J Med Genet, Vol. 15, No. 3. (July 1983), pp. 441-450.
    by DL Van Dyke, MJ Miller, L Weiss
    posted to duplication inverted tandem by breden to the group FAB-lab on 2006-08-16 16:09:36 as ** along with 1 group SFUAntibodyResearch
  • U-type exchange in a paracentric inversion as a possible mechanism of origin of an inverted tandem duplication of chromosome 8.
    Am J Med Genet, Vol. 49, No. 4. (15 February 1994), pp. 384-387.
    by JJ Mitchell, M Vekemans, S Luscombe, M Hayden, B Weber, A Richter, R Sparkes, T Kojis, G Watters, VM Der Kaloustian
    posted to duplication inverted tandem by breden to the group FAB-lab on 2006-08-16 16:59:17 as ** along with 1 group SFUAntibodyResearch
  • Comparative genetics of functional trinucleotide tandem repeats in humans and apes.
    J Mol Evol, Vol. 59, No. 3. (September 2004), pp. 329-339.
    by AM Andrés, M Soldevila, O Lao, V Volpini, N Saitou, HT Jacobs, I Hayasaka, F Calafell, J Bertranpetit
    posted to apes human repeats str tandem trinucleotide by greg to the group spliceml on 2005-01-06 06:33:30
  • RAP: a new computer program for de novo identification of repeated sequences in whole genomes.
    Bioinformatics, Vol. 21, No. 5. (1 March 2005), pp. 582-588.
    by D Campagna, C Romualdi, N Vitulo, M Del Favero, M Lexa, N Cannata, G Valle
    posted to algorithm eunice microsatellites repeats str tandem by greg to the group spliceml on 2005-03-02 04:00:33 as **
  • Software Dependability in the Tandem GUARDIAN System
    IEEE Trans. Softw. Eng., Vol. 21, No. 5. (May 1995), pp. 455-467.
    by Inhwan Lee, Ravishankar K Iyer
    posted to design distributed fault-tolerance operating-systems software-engineering tandem by fmc on 2006-12-06 21:54:28 as read
  • Analysis of software halts in the tandem GUARDIAN operating system
    Software Reliability Engineering, 1992. Proceedings., Third International Symposium on (1992), pp. 227-236.
    by I Lee, K Iyer
    posted to fault-tolerance operating-systems software-engineering tandem by fmc on 2006-12-06 21:56:40 as read
  • Selection for gene clustering by tandem duplication.
    Annu Rev Microbiol, Vol. 58 (2004), pp. 119-142.
    by AB Reams, EL Neidle
    posted to clustering duplication evolution gene tandem by fhsantanna on 2008-07-15 20:14:20 as ** along with 1 person rabu
  • Francisella tularensis strain typing using multiple-locus, variable-number tandem repeat analysis.
    J Clin Microbiol, Vol. 39, No. 9. (September 2001), pp. 3186-3192.
    by J Farlow, KL Smith, J Wong, M Abrams, M Lytle, P Keim
    posted to francisella mlva tandem by druvus on 2008-08-27 14:09:17 as ** along with 1 person greger_halltorp
  • Extensive allelic variation among Francisella tularensis strains in a short-sequence tandem repeat region.
    J Clin Microbiol, Vol. 39, No. 9. (September 2001), pp. 3140-3146.
    by A Johansson, I Göransson, P Larsson, A Sjöstedt
    posted to francisella tandem by druvus on 2008-08-26 09:33:14 as ** along with 1 person greger_halltorp
  • Worldwide genetic relationships among Francisella tularensis isolates determined by multiple-locus variable-number tandem repeat analysis.
    Journal of bacteriology, Vol. 186, No. 17. (September 2004), pp. 5808-5818.
    by A Johansson, J Farlow, P Larsson, M Dukerich, E Chambers, M Byström, J Fox, M Chu, M Forsman, A Sjöstedt, P Keim
    posted to francisella genome mlva tandem by druvus on 2008-08-26 09:29:24 as read along with 1 person carpi
  • REPuter: the manifold applications of repeat analysis on a genomic scale
    Nucl. Acids Res., Vol. 29, No. 22. (15 November 2001), pp. 4633-4642.
    by Stefan Kurtz, Jomuna V Choudhuri, Enno Ohlebusch, Chris Schleiermacher, Jens Stoye, Robert Giegerich
    posted to tandem ssr software by druvus on 2008-09-17 13:15:33 as ** along with 1 person yoanjacquemin
  • Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains : a web-based resource
    BMC Bioinformatics, Vol. 5, No. 1. (2004)
    by France Denoeud, Gilles Vergnaud
    posted to tandem software phylogeny by druvus on 2008-09-11 12:05:10 as **
  • Hydrogen Atom Scrambling in Selectively Labeled Anionic Peptides Upon Collisional Activation by MALDI Tandem Time-of-Flight Mass Spectrometry.
    Journal of the American Society for Mass Spectrometry (11 June 2008)
    by Nicolai Bache, Kasper D D Rand, Peter Roepstorff, Michael Ploug, Thomas J D J Jørgensen
    posted to anionic atom collisional hydrogen labeled maldi mass peptides scrambling selectively spectrometry tandem time-of-flight upon by BMBatSDU on 2008-07-31 12:54:10 as **
  • Towards Liquid Chromatography Time-Scale Peptide Sequencing and Characterization of Post-Translational Modifications in the Negative-Ion Mode Using Electron Detachment Dissociation Tandem Mass Spectrometry.
    Journal of the American Society for Mass Spectrometry (3 May 2008)
    by Frank Kjeldsen, Ole B B Hørning, Søren S S Jensen, Anders M B M Giessing, Ole N N Jensen
    posted to characterization chromatography detachment dissociation electron liquid mass mode modifications negative-ion peptide post-translational sequencing spectrometry tandem time-scale towards by BMBatSDU on 2008-08-01 09:36:22 as **
  • Isocratic Solid Phase Extraction-Liquid Chromatography (SPE-LC) Interfaced to High-Performance Tandem Mass Spectrometry for Rapid Protein Identification.
    Journal of proteome research (26 June 2008)
    by Ole B Hørning, Frank Kjeldsen, Søren Theodorsen, Ole Vorm, Ole N Jensen
    posted to chromatography extraction-liquid high-performance identification interfaced isocratic mass phase protein rapid solid spectrometry spe-lc tandem by BMBatSDU on 2008-08-01 09:34:25 as **
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