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タグ: structural_genomics [40 articles]

Recent papers classified by the tag structural_genomics.
  • Structural genomics: computational methods for structure analysis.
    Protein Sci, Vol. 12, No. 9. (September 2003), pp. 1813-1821.
  • The Impact of Structural Genomics: Expectations and Outcomes
    Science, Vol. 311, No. 5759. (20 January 2006), pp. 347-351.
    by John-Marc Chandonia, Steven E Brenner
  • The protein structure prediction problem could be solved using the current PDB library.
    Proc Natl Acad Sci U S A, Vol. 102, No. 4. (25 January 2005), pp. 1029-1034.
    by Y Zhang, J Skolnick
  • Progress of structural genomics initiatives: an analysis of solved target structures.
    J Mol Biol, Vol. 348, No. 5. (20 May 2005), pp. 1235-1260.
    by AE Todd, RL Marsden, JM Thornton, CA Orengo
  • 'Big science' protein project under fire
    Nature, Vol. 443, No. 7110. (2006), pp. 382-382.
    by David Cyranoski
  • A tour of structural genomics.
    Nat Rev Genet, Vol. 2, No. 10. (October 2001), pp. 801-809.
    by SE Brenner
  • The RCSB PDB information portal for structural genomics.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by A Kouranov, L Xie, J de la Cruz, L Chen, J Westbrook, PE Bourne, HM Berman
  • Structural genomics of RNA.
    Nat Struct Biol, Vol. 7 Suppl (November 2000), pp. 954-956.
    by JA Doudna
  • A normalised scale for structural genomics target ranking: The OB-Score.
    FEBS Lett, Vol. 580, No. 16. (10 July 2006), pp. 4005-4009.
    by IM Overton, GJ Barton
  • Comprehensive genome analysis of 203 genomes provides structural genomics with new insights into protein family space
    Nucleic Acids Research, Vol. 34, No. 3. (2006), pp. 1066-1080.
    by Russell L Marsden, David Lee, Michael Maibaum, Corin Yeats, Christine A Orengo
  • Structural genomics analysis of alternative splicing and application to isoform structure modeling.
    Proc Natl Acad Sci U S A (14 December 2005)
    by Peng Wang, Bo Yan, Jun-Tao T Guo, Chindo Hicks, Ying Xu
  • Protein structure prediction in genomics.
    Brief Bioinform, Vol. 2, No. 2. (May 2001), pp. 111-125.
    by DT Jones
  • The role of protein structure in genomics.
    FEBS Lett, Vol. 476, No. 1-2. (30 June 2000), pp. 98-102.
  • The PDB is a covering set of small protein structures.
    J Mol Biol, Vol. 334, No. 4. (5 December 2003), pp. 793-802.
  • Protein structure modeling for structural genomics.
    Nat Struct Biol, Vol. 7 Suppl (November 2000), pp. 986-990.
  • Structural similarity to bridge sequence space: finding new families on the bridges.
    Protein Sci, Vol. 14, No. 5. (May 2005), pp. 1305-1314.
    by PK Shah, P Aloy, P Bork, RB Russell
  • Introduction to informatics approaches in structural genomics: modeling and representation of function from macromolecular structure.
    Pac Symp Biocomput (2005), pp. 319-321.
    by PC Babbitt, PE Bourne, SD Mooney
  • Structural proteomics: from the molecule to the system
    Nature Structural & Molecular Biology, Vol. 14, No. 1., pp. 3-4.
    by Lucia Banci, Wolfgang Baumeister, Josefina Enfedaque, Udo Heinemann, Gunter Schneider, Israel Silman, Joel L Sussman
  • Functional Coverage of the Human Genome by Existing Structures, Structural Genomics Targets, and Homology Models.
    PLoS Comput Biol, Vol. 1, No. 3. (19 August 2005)
    by Lei Xie, Philip E E Bourne
  • The challenge of protein structure determination lessons from structural genomics
    Protein Sci, Vol. 16, No. 11. (1 November 2007), pp. 2472-2482.
    by Lukasz Slabinski, Lukasz Jaroszewski, Ana P Rodrigues, Leszek Rychlewski, Ian A Wilson, Scott A Lesley, Adam Godzik
    posted to structural_genomics by jwm on 2007-11-05 18:40:47 as ** along with 2 people ana rph
  • Disseminating structural genomics data to the public: from a data dump to an animated story.
    Trends Biochem Sci (4 January 2006)
    by Ruben Abagyan, Wen Hwa H Lee, Eugene Raush, Levon Budagyan, Maxim Totrov, Michael Sundstrom, Brian D D Marsden
  • Towards Fully Automated Structure-based Function Prediction in Structural Genomics: A Case Study
    Journal of Molecular Biology, Vol. 367, No. 5. (13 April 2007), pp. 1511-1522.
    by James D Watson, Steve Sanderson, Alexandra Ezersky, Alexei Savchenko, Aled Edwards, Christine Orengo, Andrzej Joachimiak, Roman A Laskowski, Janet M Thornton
  • The scientific impact of the Structural Genomics Consortium: a protein family and ligand-centered approach to medically-relevant human proteins.
    J Struct Funct Genomics (12 October 2007)
    by Opher Gileadi, Stefan Knapp, Wen H Lee, Brian D Marsden, Susanne Müller, Frank H Niesen, Kathryn L Kavanagh, Linda J Ball, Frank von Delft, Declan A Doyle, Udo C Oppermann, Michael Sundström
    posted to sgc structural_genomics by jwm on 2007-12-10 12:47:51 as **
  • A practical and robust sequence search strategy for structural genomics target selection.
    Bioinformatics (Oxford, England), Vol. 20, No. 14. (22 September 2004), pp. 2288-2295.
    by JE Bray, RL Marsden, SC Rison, A Savchenko, AM Edwards, JM Thornton, CA Orengo
    posted to structural_bioinformatics structural_genomics by jwm on 2008-06-03 12:58:12 as **
  • sgTarget: a target selection resource for structural genomics.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006)
    by AP Rodrigues, BJ Grant, RE Hubbard
  • Structural characterization of genomes by large scale sequence-structure threading: application of reliability analysis in structural genomics.
    BMC Bioinformatics, Vol. 5, No. 1. (26 July 2004)
    by A Cherkasov, SJ Ho Sui, RC Brunham, SJ Jones
  • Application of high-throughput technologies to a structural-proteomics type analysis of Bacillus anthracis
    Acta Crystallographica Section D Biological Crystallography
    by Au
    posted to structural_genomics by ana to the group Bioinformatics on 2006-10-11 23:47:27 as read along with 1 group structural_bioinformatics
  • Will my protein crystallize? A sequence-based predictor.
    Proteins, Vol. 62, No. 2. (1 February 2006), pp. 343-355.
  • Heterologous expression of proteins from Plasmodium falciparum: Results from 1000 genes
    Molecular and Biochemical Parasitology, Vol. In Press, Corrected Proof
    by Christopher Mehlin, Erica Boni, Frederick S Buckner, Linnea Engel, Tiffany Feist, Michael H Gelb, Lutfiyah Haji, David Kim, Colleen Liu, Natascha Mueller
  • Structural genomics meets computational biology
    Bioinformatics, Vol. 22, No. 19. (1 October 2006), 2319.
    by Alex Bateman, Alfonso Valencia
  • Making decisions for structural genomics.
    Brief Bioinform, Vol. 4, No. 2. (June 2003), pp. 150-167.
  • Structural and Chemical Profiling of the Human Cytosolic Sulfotransferases
    PLoS Biology, Vol. 5, No. 5. (1 May 2007), e97.
    by Abdellah Allali-Hassani, Patricia W Pan, Ludmila Dombrovski, Rafael Najmanovich, Wolfram Tempel, Aiping Dong, Peter Loppnau, Fernando Martin, Janet Thonton, Aled M Edwards, Alexey Bochkarev, Alexander N Plotnikov, Masoud Vedadi, Cheryl H Arrowsmith
  • Target selection for complex structural genomics
    Current Opinion in Structural Biology, Vol. 16, No. 3. (June 2006), pp. 385-392.
    by Jeronimo Bravo, Patrick Aloy
  • High-throughput computational and experimental techniques in structural genomics.
    Genome Res, Vol. 14, No. 10B. (October 2004), pp. 2145-2154.
    by MR Chance, A Fiser, A Sali, U Pieper, N Eswar, G Xu, JE Fajardo, T Radhakannan, N Marinkovic
  • An NMR approach to structural proteomics.
    Proc Natl Acad Sci U S A, Vol. 99, No. 4. (19 February 2002), pp. 1825-1830.
    by A Yee, X Chang, A Pineda-Lucena, B Wu, A Semesi, B Le, T Ramelot, GM Lee, S Bhattacharyya, P Gutierrez, A Denisov, CH Lee, JR Cort, G Kozlov, J Liao, G Finak, L Chen, D Wishart, W Lee, LP McIntosh, K Gehring, MA Kennedy, AM Edwards, CH Arrowsmith
  • Tech.Sight. Industrializing structural biology.
    Science, Vol. 293, No. 5529. (20 July 2001), pp. 519-520.
    by RC Stevens, IA Wilson
    posted to experimental review structural_genomics by dgront on 2006-05-09 13:02:55 as read
  • Target practice.
    Nat Struct Biol, Vol. 8, No. 6. (June 2001), pp. 482-484.
    by A Sali
    posted to comparative_modeling structural_genomics by dgront on 2006-08-28 16:24:48 as read
  • Global Efforts in Structural Genomics
    Science, Vol. 294, No. 5540. (5 October 2001), pp. 89-92.
    by Raymond C Stevens, Shigeyuki Yokoyama, Ian A Wilson
    posted to review structural_genomics by dgront on 2006-07-23 14:23:05 as read
  • Structural systems biology: modelling protein interactions
    Nature Reviews Molecular Cell Biology, Vol. 7, No. 3., pp. 188-197.
    by Patrick Aloy, Robert B Russell
  • From words to literature in structural proteomics.
    Nature, Vol. 422, No. 6928. (13 March 2003), pp. 216-225.
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