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タグ: spectrometry [58 articles]

Recent papers classified by the tag spectrometry.
  • High-Quality Binary Protein Interaction Map of the Yeast Interactome Network
    Science (21 August 2008), 1158684.
    by Haiyuan Yu, Pascal Braun, Muhammed A Yildirim, Irma Lemmens, Kavitha Venkatesan, Julie Sahalie, Tomoko Hirozane-Kishikawa, Fana Gebreab, Na Li, Nicolas Simonis, Tong Hao, Jean-Francois Rual, Amelie Dricot, Alexei Vazquez, Ryan R Murray, Christophe Simon, Leah Tardivo, Stanley Tam, Nenad Svrzikapa, Changyu Fan, Anne-Sophie de Smet, Adriana Motyl, Michael E Hudson, Juyong Park, Xiaofeng Xin, Michael E Cusick, Troy Moore, Charlie Boone, Michael Snyder, Frederick P Roth, Albert-Laszlo Barabasi, Jan Tavernier, David E Hill, Marc Vidal
    posted to yeast two-hybrid spectrometry mass bioinformatics by yeastyboy on 2008-09-02 12:11:04 as ** along with 4 people grahamc jyuh maralena neils
  • Mass spectrometry-based functional proteomics: from molecular machines to protein networks
    Nat Meth, Vol. 4, No. 10. (October 2007), pp. 807-815.
    by Thomas Kocher, Giulio Superti-Furga
    posted to interaction maspit mass method protein spectrometry by yeastyboy on 2007-10-16 14:56:20 as *** along with 1 person jyuh
  • Automated identification of SUMOylation sites using mass spectrometry and SUMmOn pattern recognition software
    Nature Methods, Vol. 3, No. 7. (21 June 2006), pp. 533-539.
    by Patrick GA Pedrioli, Brian Raught, Xiang-Dong Zhang, Richard Rogers, John Aitchison, Michael Matunis, Ruedi Aebersold
    posted to and mass pattern recognition sites software spectrometry summon sumoylation using by tmpu9774 on 2007-01-02 01:09:03 as ***
  • Identification of illicit drugs by using SOM neural networks
    Journal of Physics D: Applied Physics, Vol. 41, No. 13. (2008), 135306.
    by Meiyan Liang, Jingling Shen, Guangqin Wang
    posted to drugs som spectrometry by thefillm on 2008-07-27 16:14:35 as *****
  • Application of Mass Spectrometry in Proteomics
    Bioscience Reports, Vol. 25, No. 1-2. (February 2005), pp. 71-93.
    by Ida Guerrera, Oliver Kleiner
    posted to mass proteins proteomics spectrometry by sverzijl on 2007-08-19 17:24:21 as read along with 1 person taenneken
  • Large-scale protein identification using mass spectrometry.
    Biochim Biophys Acta, Vol. 1646, No. 1-2. (21 March 2003), pp. 1-10.
    by D Lin, DL Tabb, JR Yates
    posted to mass proteins spectrometry by sverzijl on 2007-08-06 04:59:32 as ***
  • Mass spectrometry-based proteomics
    Nature, Vol. 422, No. 6928. (13 March 2003), pp. 198-207.
    by Ruedi Aebersold, Matthias Mann
    posted to proteins proteomics spectrometry by sverzijl on 2007-08-19 17:26:51 as read along with 6 people jmeppley dgront frohike olberd carlk taenneken
  • The serum proteome of <B><I>Equus caballus</I></B>
    PROTEOMICS, Vol. 4, No. 10. (2004), pp. 3227-3234.
    by Ingrid Miller, Arno Friedlein, George Tsangaris, Antony Maris, Michael Fountoulakis, Manfred Gemeiner
    posted to caballus electrophoresis equus proteins proteome serum spectrometry by sverzijl on 2007-08-19 09:19:59 as read
  • Mass Spectrometry and Protein Analysis
    Science, Vol. 312, No. 5771. (14 April 2006), pp. 212-217.
    by Bruno Domon, Ruedi Aebersold
    posted to protein spectrometry by sverzijl on 2007-08-19 16:40:02 as read along with 2 people balabu jo_davies
  • A mammalian organelle map by protein correlation profiling.
    Cell, Vol. 125, No. 1. (7 April 2006), pp. 187-199.
    by LJ Foster, CL de Hoog, Y Zhang, Y Zhang, X Xie, VK Mootha, M Mann
    posted to localization mass nazanin peroxisome spectrometry by ptrobajo on 2008-08-25 16:22:40 as ** along with 1 person kentsis
  • Mass spectrometry proteomic diagnosis: enacting the double cross-validatory paradigm.
    Journal of computational biology : a journal of computational molecular cell biology, Vol. 13, No. 9. (November 2006), pp. 1591-1605.
    by BJ Mertens, ME De Noo, RA Tollenaar, AM Deelder
    posted to classification cross-validation mass seldi spectrometry by ptrobajo on 2008-07-01 12:26:09 as **
  • Age-related subproteomic analysis of mouse liver and kidney peroxisomes
    Proteome Science, Vol. 5 (27 November 2007), 19.
    by Jia Mi, Itsaso Garcia-Arcos, Ruben Alvarez, Susana Cristobal
    posted to mass mouse peroxisome proteomics spectrometry tissue-specific by ptrobajo on 2008-06-24 23:04:57 as **
  • Mapping the Arabidopsis organelle proteome
    Vol. 103, No. 17. (25 April 2006), pp. 6518-6523.
    by Tom P Dunkley, Svenja Hester, Ian P Shadforth, John Runions, Thilo Weimar, Sally L Hanton, Julian L Griffin, Conrad Bessant, Federica Brandizzi, Chris Hawes, Rod B Watson, Paul Dupree, Kathryn S Lilley
    posted to arabidopsis mass nazanin spectrometry by ptrobajo on 2008-08-25 16:25:28 as **
  • Proteomics Characterization of Mouse Kidney Peroxisomes by Tandem Mass Spectrometry and Protein Correlation Profiling
    Mol Cell Proteomics, Vol. 6, No. 12. (1 December 2007), pp. 2045-2057.
    by Sebastian Wiese, Thomas Gronemeyer, Rob Ofman, Markus Kunze, Claudia P Grou, Jose A Almeida, Martin Eisenacher, Christian Stephan, Heiko Hayen, Lukas Schollenberger, Thomas Korosec, Hans R Waterham, Wolfgang Schliebs, Ralf Erdmann, Johannes Berger, Helmut E Meyer, Wilhelm Just, Jorge E Azevedo, Ronald J Wanders, Bettina Warscheid
    posted to mass mouse nazanin peroxisome spectrometry by ptrobajo on 2008-06-27 09:49:15 as ** along with 1 person mdstobbe
  • OutlierD: An R package for outlier detection using quantile regression on mass spectrometry data.
    Bioinformatics (10 January 2008)
    by Hyungjun Cho, Yang-Jin J Kim, Hee Jung J Jung, Sang-Won W Lee, Jae Won W Lee
    posted to detection mass outlier spectrometry wouter by ptrobajo on 2008-05-05 21:43:29 as ** along with 1 person jyuh
  • Characterizing the extracellular and intracellular fluorescent products of activated sludge in a sequencing batch reactor
    Water Research, Vol. 42, No. 12. (June 2008), pp. 3173-3181.
    by Wei-Hua Li, Guo-Ping Sheng, Xian-Wei Liu, Han-Qing Yu
    posted to activated_sludge activity characterisation fluo humic_acids metabolism method nadh spectrometry by Pascalichouchou on 2008-06-10 12:56:34 as ****
  • In-gel digestion for mass spectrometric characterization of proteins and proteomes.
    Nat Protoc, Vol. 1, No. 6. (2006), pp. 2856-2860.
    by A Shevchenko, H Tomas, J Havlis, JV Olsen, M Mann
    posted to digest in-gel mass proteomics spectrometry tryptic by okniemey on 2007-08-10 12:54:37 as read along with 2 people jyuh robert
  • Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry.
    Nature, Vol. 415, No. 6868. (10 January 2002), pp. 180-183.
    by Y Ho, A Gruhler, A Heilbut, GD Bader, L Moore, SL Adams, A Millar, P Taylor, K Bennett, K Boutilier, L Yang, C Wolting, I Donaldson, S Schandorff, J Shewnarane, M Vo, J Taggart, M Goudreault, B Muskat, C Alfarano, D Dewar, Z Lin, K Michalickova, AR Willems, H Sassi, PA Nielsen, KJ Rasmussen, JR Andersen, LE Johansen, LH Hansen, H Jespersen, A Podtelejnikov, E Nielsen, J Crawford, V Poulsen, BD Sørensen, J Matthiesen, RC Hendrickson, F Gleeson, T Pawson, MF Moran, D Durocher, M Mann, CW Hogue, D Figeys, M Tyers
    posted to cerevisiae mass protein saccharomyces spectrometry by okarsligil on 2005-11-09 01:24:48 as ** along with 9 people and 3 groups bicko shivaram lfriedl chad_davis lyongu gcalda raiyar helenamistry iris_2001 kdl Bioinformatics steinmetzlab
  • Statistical and computational methods for comparative proteomic profiling using liquid chromatography-tandem mass spectrometry.
    Mol Cell Proteomics, Vol. 4, No. 4. (April 2005), pp. 419-434.
    by J Listgarten, A Emili
    posted to alignment analysis bioinformatics chromatography liquid mass normalization proteomics spectrometry by ml_and_apps on 2006-07-15 17:35:01 as read along with 2 people waszak olberd
  • Huntingtin phosphorylation sites mapped by mass spectrometry. Modulation of cleavage and toxicity.
    J Biol Chem, Vol. 281, No. 33. (18 August 2006), pp. 23686-23697.
    by B Schilling, J Gafni, C Torcassi, X Cong, RH Row, MA LaFevre-Bernt, MP Cusack, T Ratovitski, R Hirschhorn, CA Ross, BW Gibson, LM Ellerby
    posted to toxicity spectrometry phosphorylation modulation mass huntingtin by mgaldzic on 2007-01-31 22:36:57 as ** along with 1 group CHIP
  • Remote sensing of forest biophysical variables using HyMap imaging spectrometer data
    Remote Sensing of Environment, Vol. 95, No. 2. (30 March 2005), pp. 177-194.
    by Martin Schlerf, Clement Atzberger, Joachim Hill
    posted to biophysical forest hyperspectral imaging indices lai multispectral spectrometry variables vegetation by megea on 2005-09-02 19:37:37 as ***
  • Tandem mass spectrometry method for the quantification of serum busulfan.
    Ther Drug Monit, Vol. 27, No. 5. (October 2005), pp. 625-629.
    by MD Kellogg, T Law, M Sakamoto, N Rifai
    posted to busulfan cv mass spectrometry by markkellogg on 2006-11-21 19:31:43 as read
  • Rapid and Simple Tandem Mass Spectrometry Method for Determination of Serum Cotinine Concentration
    Clin Chem, Vol. 50, No. 11. (1 November 2004), pp. 2157-2159.
    by Mark D Kellogg, Jasna Behaderovic, Oneil Bhalala, Nader Rifai
    posted to cotinine cv mass spectrometry by markkellogg on 2006-11-21 19:33:44 as read
  • Validated toxicological determination of 30 drugs of abuse as optimized derivatives in oral fluid by long column fast gas chromatography/electron impact mass spectrometry.
    J Mass Spectrom (1 April 2005)
    by Teemu Gunnar, Kari Ariniemi, Pirjo Lillsunde
    posted to chromatography drugs gas mass spectrometry toxicology by KTL on 2005-04-12 12:58:44 as **
  • Determination of 14 benzodiazepines and hydroxy metabolites, zaleplon and zolpidem as tert-butyldimethylsilyl derivatives compared with other common silylating reagents in whole blood by gas chromatography-mass spectrometry.
    J Chromatogr B Analyt Technol Biomed Life Sci, Vol. 818, No. 2. (25 April 2005), pp. 175-189.
    by T Gunnar, K Ariniemi, P Lillsunde
    posted to benzodiazepines chromatography drugs spectrometry by KTL on 2005-04-12 13:20:29 as **
  • From pull-down data to protein interaction networks and com-plexes with biological relevance.
    Bioinformatics (26 February 2008)
    by Bing Zhang, Byung-Hoon H Park, Tatiana Karpinets, Nagiza F F Samatova
    posted to complex core htp mass network ppi prediction protein spectrometry by kluck on 2008-04-25 08:25:13 as ** along with 4 people jyuh chad_davis grahamc carlk
  • Protein identification via ion-trap collision-induced dissociation and examination of low-mass product ions
    Journal of Mass Spectrometry, Vol. 9999, No. 9999. (2007), n/a.
    by Jeremiah J Bowers, Jian Liu, Harsha P Gunawardena, Scott A Mcluckey
    posted to ion mass spectrometry trap by kkmurray on 2007-07-10 04:38:28 as **
  • Analysis of the structural heterogeneity of laminarin by electrospray-ionisation-mass spectrometry.
    Carbohydr Res, Vol. 281, No. 2. (23 February 1996), pp. 187-201.
    by SM Read, G Currie, A Bacic
    posted to beta-13-glucans branching esi-ms glucan heterogeneity laminarin mass ms spectrometry by jonasvasur on 2007-11-13 15:31:08 as ***
  • A low-cost Fourier transform spectrometer for the visible and near-infrared regions
    Journal of Physics E: Scientific Instruments, Vol. 20, No. 8. (1987), pp. 1005-1011.
    by P Biggs, FJ Holdsworth, RP Wayne
    posted to fourier interferometry spectrometer spectrometry by jkominek on 2007-06-04 19:07:49 as ***
  • Analysis of proteins and proteomes by mass spectrometry.
    Annual review of biochemistry, Vol. 70 (2001), pp. 437-473.
    by M Mann, RC Hendrickson, A Pandey
    posted to complex mass ppi spectrometry by iris_2001 on 2008-04-24 14:40:54 as **
  • Peptide Sequence Tags for Fast Database Search in Mass-Spectrometry
    J. Proteome Res., Vol. 4, No. 4. (8 August 2005), pp. 1287-1295.
    by A Frank, S Tanner, V Bafna, P Pevzner
    posted to database peptide search spectrometry tags by hoangmit on 2006-05-28 08:21:39 as ** along with 1 person nedwards
  • Mass spectrometry of RNA: linking the genome to the proteome.
    Brief Funct Genomic Proteomic, Vol. 5, No. 1. (March 2006), pp. 87-95.
    by Z Meng, PA Limbach
    posted to genomics protemics ncrna spectrometry transcriptomics by bsmagic to the group Bioinformatics on 2006-11-16 13:30:00 as ** along with 1 person and 1 group jayster4 bioinplant
  • Mass spectrometry of RNA
    Trends in Biochemical Sciences, Vol. 31, No. 3. (March 2006), pp. 173-181.
    by Benjamin Thomas, Alexandre V Akoulitchev
    posted to microrna mirna ncrna review rna sirna spectrometry techniques by cdawson to the group GIG on 2006-07-20 08:32:33 as read along with 1 person and 2 groups marcius BioinfoCIPF SGU-CIPF
  • Mass-spectrometry DNA sequencing
    Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis, Vol. 573, No. 1-2. (3 June 2005), pp. 3-12.
    by John R Edwards, Hameer Ruparel, Jingyue Ju
    posted to dna review rna spectrometry techniques by cdawson to the group GIG on 2006-07-20 08:39:10 as ***
  • The use of mass spectrometry in genomics
    Biomolecular Engineering, Vol. 21, No. 1. (January 2004), pp. 1-13.
    by Zhaojing Meng, Tracey A Simmons-Willis, Patrick A Limbach
    posted to dna methods review rna spectrometry techniques by cdawson to the group GIG on 2006-07-20 08:36:54 as **
  • DNA sequencing by delayed extraction-matrix-assisted laser desorption/ionization time of flight mass spectrometry.
    Proc Natl Acad Sci U S A, Vol. 93, No. 10. (14 May 1996), pp. 4724-4729.
    by MT Roskey, P Juhasz, IP Smirnov, EJ Takach, SA Martin, LA Haff
    posted to dna methods spectrometry techniques by cdawson to the group GIG on 2006-07-20 08:33:18 as **
  • Direct mass spectrometric analysis of intact proteins of the yeast large ribosomal subunit using capillary LC/FTICR.
    Proc Natl Acad Sci U S A, Vol. 99, No. 9. (30 April 2002), pp. 5942-5947.
    by SW Lee, SJ Berger, S Martinović, L Pasa-Tolić, GA Anderson, Y Shen, R Zhao, RD Smith
    posted to icr-2ls intact mass proteins spectrometry by gorlitsky on 2005-05-17 17:39:01 as ***
  • Pharmacoproteomic analysis of prechemotherapy and postchemotherapy plasma samples from patients receiving neoadjuvant or adjuvant chemotherapy for breast carcinoma
    Cancer, Vol. 100, No. 9. (29 March 2004), pp. 1814-1822.
    by Lajos Pusztai, , Phil, Betsy W Gregory, , Keith A Baggerly, Ph, Bo Peng, , John Koomen, Ph, Henry M Kuerer, , Ph, Francisco J Esteva, , Ph, Fraser F Symmans, , Peter Wagner, , Gabriel N Hortobagyi, , Christine Laronga, , John J Semmes, Ph, George L Wright, Ph, Richard R Drake, Ph, Antonia Vlahou, Ph
    posted to cancer proteomics spectrometry by gorlitsky on 2005-05-18 00:51:19 as read
  • Quality control and peak finding for proteomics data collected from nipple aspirate fluid by surface-enhanced laser desorption and ionization.
    Clin Chem, Vol. 49, No. 10. (October 2003), pp. 1615-1623.
    by KR Coombes, HA Fritsche, C Clarke, JN Chen, KA Baggerly, JS Morris, LC Xiao, MC Hung, HM Kuerer
    posted to proteomics spectrometry by gorlitsky on 2005-05-18 00:59:49 as ** along with 2 people Gehrke nicholso
  • Advanced Engineering Mathematics, 9th Edition
    (29 December 2005)
    by Erwin Kreyszig
    posted to spectrometry by gkvas on 2007-01-15 13:07:51 as **
  • A method for computing the fast Fourier transform with auxiliary memory and limited high-speed storage
    Audio and Electroacoustics, IEEE Transactions on, Vol. 15, No. 2. (1967), pp. 91-98.
    by R Singleton
    posted to spectrometry by gkvas on 2007-01-15 13:08:54 as **
  • Fourier Transforms in Spectroscopy
    (08 February 2001)
    by Jyrki Kauppinen, Jari Partanen
    posted to spectrometry by gkvas on 2007-01-15 13:15:50 as **
  • Mass spectrometry and Web 2.0
    Journal of Mass Spectrometry, Vol. 42, No. 10. (2007), pp. 1263-1271.
    by Kermit K Murray
    posted to web spectrometry mass by egonw on 2008-09-02 15:13:29 as ** along with 1 person dullhunk
  • Proteins associated with type II bone morphogenetic protein receptor (BMPR-II) and identified by two-dimensional gel electrophoresis and mass spectrometry.
    Proteomics, Vol. 4, No. 5. (May 2004), pp. 1346-1358.
    by S Hassel, A Eichner, M Yakymovych, U Hellman, P Knaus, S Souchelnytskyi
    posted to bmpr-ii interaction mass protein spectrometry by Dualsystems on 2006-11-20 16:17:13 as **
  • Mechanosensitivity of GIRK Channels Is Mediated by Protein Kinase C-dependent Channel-Phosphatidylinositol 4,5-Bisphosphate Interaction
    J. Biol. Chem., Vol. 279, No. 8. (20 February 2004), pp. 7037-7047.
    by Liyan Zhang, Jong-Kook Lee, Scott A John, Nobuyuki Uozumi, Itsuo Kodama
    posted to acetate fluorescence hydrolysis inhibitor kinase luminescent mutagenesis naphthalene osmosis phosphatidylinositol potassium protein spectrometry staurosporine structure tetradecanoylphorbol pip2 by dimka on 2006-09-27 01:20:25 as **
  • Applications of FT-IR spectrometry to plasma contents analysis and monitoring
    Vibrational Spectroscopy, Vol. 32, No. 1. (05 August 2003), pp. 129-136.
    by Gerard Deleris, Cyril Petibois
    posted to analysis classification clinics ft-ir method microsample molecular plasma proteins spectrometry by die95 on 2005-01-20 11:45:48 as *** along with 1 person rmj001
  • Metabolic fingerprinting as a diagnostic tool.
    Pharmacogenomics, Vol. 8, No. 9. (September 2007), pp. 1243-1266.
    by David I I Ellis, Warwick B B Dunn, Julian L L Griffin, J William W Allwood, Royston Goodacre
    posted to desi diagnosis dims dios disease fingerprinting ft-ir ldi lipidomics mass metabolic metabolomics metabonomics nmr raman spectrometry by die95 on 2007-11-23 13:14:56 as *****
  • Functional genomics via metabolic footprinting: monitoring metabolite secretion by
    Comparative and Functional Genomics, Vol. 4, No. 4. (18 July 2003), pp. 376-391.
    by Naheed N Kaderbhai, David I Broadhurst, David I Ellis, Royston Goodacre, Douglas B Kell
    posted to algorithm coli escherichia footprinting ftir genetic mass metabolic metabolome metabolomics spectrometry spectroscopy tryptophan by die95 on 2005-01-19 10:37:44 as *** along with 1 person rmj001
  • Assessment of lectin and HILIC based enrichment protocols for characterization of serum glycoproteins by mass spectrometry.
    Journal of proteomics (4 July 2008)
    by Cosima D D Calvano, Carlo G G Zambonin, Ole N N Jensen
    posted to assessment by characterization enrichment glycoproteins hilic lectin mass protocols serum spectrometry by BMBatSDU on 2008-07-31 12:54:41 as **
  • The origins of enhanced activity in factor VIIa analogs and the interplay between key allosteric sites revealed by hydrogen exchange mass spectrometry.
    The Journal of biological chemistry, Vol. 283, No. 19. (9 May 2008), pp. 13378-13387.
    by KD Rand, MD Andersen, OH Olsen, TJ Jørgensen, H Ostergaard, ON Jensen, HR Stennicke, E Persson
    posted to analogs by enhanced exchange factor hydrogen in interplay key mass origins revealed sites spectrometry viia by BMBatSDU on 2008-08-01 09:42:54 as **
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