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タグ: single-molecule [97 articles]

Recent papers classified by the tag single-molecule.
  • Single-molecule analysis of RNA polymerase transcription.
    Annu Rev Biophys Biomol Struct, Vol. 35 (2006), pp. 343-360.
    by L Bai, TJ Santangelo, MD Wang
    posted to analysis pic polymerase review rna single-molecule tec transcription by xico on 2007-05-18 01:23:56 as **** along with 1 group WetBiology
  • Spring-Loaded Mechanism of DNA Unwinding by Hepatitis C Virus NS3 Helicase
    Science, Vol. 317, No. 5837. (27 July 2007), pp. 513-516.
    by Sua Myong, Michael M Bruno, Anna M Pyle, Taekjip Ha
    posted to dna helicase single-molecule by wduim on 2007-08-08 21:07:59 as *** along with 1 person yusdi
  • Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA
    Nucleic Acids Research, Vol. 35, No. 3. (February 2007), pp. 999-1006.
    by Arluison, Veronique, Hohng, Sungchul, Roy, Rahul, Pellegrini, Olivier, Regnier, Philippe, Ha, Taekjip
    posted to rna single-molecule by wduim on 2007-08-08 21:02:40 as **
  • Probing Protein-Chaperone Interactions with Single-Molecule Fluorescence Spectroscopy13
    Angewandte Chemie International Edition, Vol. 47, No. 33. (2008), pp. 6184-6188.
    by Frank Hillger, Dominik Hänni, Daniel Nettels, Sonja Geister, Michelle Grandin, Marcus Textor, Benjamin Schuler
    posted to single-molecule fret chaperone by wduim on 2008-09-19 19:03:11 as *** along with 1 person and 1 group samjlord moernerlab
  • Single-Molecule Spectroscopic Characterization of Light-Harvesting 2 Complexes Reconstituted into Model Membranes
    Biophys. J., Vol. 93, No. 1. (1 July 2007), pp. 183-191.
    by Martin F Richter, Jurgen Baier, Richard J Cogdell, Jurgen Kohler, Silke Oellerich
    posted to membrane single-molecule by wduim on 2007-08-08 01:45:43 as **
  • The Fluorescence Dynamics of Single Molecules of Green Fluorescent Protein
    J. Phys. Chem. A, Vol. 103, No. 49. (9 December 1999), pp. 10553-10560.
    by EJG Peterman, S Brasselet, WE Moerner
    posted to agarose gfp single-molecule by wduim on 2008-03-10 18:19:14 as ** along with 2 people and 2 groups samjlord rodney moernerlab Kopelman_Group
  • Multiple events on single molecules: Unbiased estimation in single-molecule biophysics
    PNAS, Vol. 103, No. 6. (7 February 2006), pp. 1750-1755.
    by Daniel A Koster, Chris H Wiggins, Nynke H Dekker
    posted to single-molecule by sotaro on 2006-03-01 02:06:49 as ** along with 3 people and 1 group FBerkemeier samjlord melting moernerlab
  • Probing protein-DNA interactions by unzipping a single DNA double helix.
    Biophys J, Vol. 83, No. 2. (August 2002), pp. 1098-1105.
    by SJ Koch, A Shundrovsky, BC Jantzen, MD Wang
    posted to unzipping ufapa single-molecule protein mapping genomics dna by skoch3 on 2007-02-03 08:58:59 as read along with 1 group Koch_Lab
  • Chair-boat transitions in single polysaccharide molecules observed with force-ramp AFM
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 7. (2 April 2002), pp. 4278-4283.
    by Piotr E Marszalek, Hongbin Li, Andres F Oberhauser, Julio M Fernandez
    posted to single-molecule polysaccharide biophysics by skoch3 on 2008-09-22 08:05:34 as read along with 1 group Koch_Lab
  • On-site manipulation of single whole-genome DNA molecules using optical tweezers
    Applied Physics Letters, Vol. 85, No. 21. (2004), pp. 5090-5092.
    by Hidehiro Oana, Koji Kubo, Kenichi Yoshikawa, Haruyuki Atomi, Tadayuki Imanaka
    posted to chromatin optical single-molecule tweezers by skoch3 on 2008-05-15 05:22:37 as ***** along with 1 person and 1 group hirokiS Koch_Lab
  • A mechanical unfolding intermediate in an actin-crosslinking protein
    Nat Struct Mol Biol, Vol. 11, No. 1. (January 2004), pp. 81-85.
    by Ingo Schwaiger, Angelika Kardinal, Michael Schleicher, Angelika A Noegel, Matthias Rief
    posted to single-molecule polyglycine by skoch3 on 2008-09-22 08:40:56 as *** along with 1 person and 1 group ruudvanleeuwen Koch_Lab
  • A general method for manipulating DNA sequences from any organism with optical tweezers
    Nucleic Acids Research, Vol. 34, No. 2. (2006), pp. e15-e15.
    by Derek N Fuller, Gregory J Gemmen, John P Rickgauer, Aurelie Dupont, Rachel Millin, Pierre Recouvreux, Douglas E Smith
    posted to dna optical pcr single-molecule tethering tweezers by skoch3 on 2008-05-20 00:10:11 as **** along with 1 group Koch_Lab
  • Chromatin remodeling: insights and intrigue from single-molecule studies
    Nature Structural & Molecular Biology, Vol. 14, No. 11. (05 November 2007), pp. 989-996.
    by Bradley R Cairns
    posted to chromatin remodeling review single-molecule by skoch3 on 2008-04-30 06:21:30 as read along with 3 people and 2 groups Petersarkies zhlei cwbrown EisenLab Koch_Lab
  • Stretching of Homopolymeric RNA Reveals Single-Stranded Helices and Base-Stacking
    Physical Review Letters, Vol. 98, No. 15. (2007)
    by Yeonee Seol, Gary M Skinner, Koen Visscher, Arnaud Buhot, Avraham Halperin
    posted to afm biophysics force rna single-molecule spectroscopy by skoch3 on 2007-06-19 18:45:56 as **** along with 1 person and 1 group awallin Koch_Lab
  • Pulling geometry-induced errors in single molecule force spectroscopy measurements.
    Biophys J, Vol. 92, No. 9. (1 May 2007)
    by C Ke, Y Jiang, M Rivera, RL Clark, PE Marszalek
    posted to biophysics dna force single-molecule spectroscopy by skoch3 on 2007-04-11 21:47:53 as *** along with 1 group Koch_Lab
  • Active PHO5 chromatin encompasses variable numbers of nucleosomes at individual promoters
    Nature Structural & Molecular Biology, Vol. 13, No. 3. (19 February 2006), pp. 256-263.
    by Walter J Jessen, Scott A Hoose, Jessica A Kilgore, Michael P Kladde
    posted to chromatin pho5 remodeling single-molecule by skoch3 on 2008-06-19 18:10:01 as ***** along with 1 person and 1 group ramalldf Koch_Lab
  • A micromachined DNA manipulation platform for the stretching and rotation of a single DNA molecule The preliminary results of the current paper were presented at the IEEE 17th International MEMS Conference (IEEE MEMS 2004), Maastricht, Netherlands, 25–29 Jan. 2004.
    Journal of Micromechanics and Microengineering, Vol. 15, No. 1. (2005), pp. 109-117.
    by Chi H Chiou, Gwo B Lee
    posted to beads biomems biophysics dna force magnetic mems microspheres single-molecule by skoch3 on 2007-02-14 06:59:54 as *** along with 1 group Koch_Lab
  • Multi-Nanopore Force Spectroscopy for DNA Analysis
    Biophys. J., Vol. 92, No. 5. (1 March 2007), pp. 1632-1637.
    by Carolina Tropini, Andre Marziali
    posted to biophysics dna force nanopore sensor single-molecule spectroscopy by skoch3 on 2007-02-20 05:46:22 as *** along with 1 group Koch_Lab
  • Single-Molecule Studies Reveal Dynamics of DNA Unwinding by the Ring-Shaped T7 Helicase
    Cell, Vol. 129, No. 7. (29 June 2007), pp. 1299-1309.
    by Daniel S Johnson, Lu Bai, Benjamin Y Smith, Smita S Patel, Michelle D Wang
    posted to biophysics dna helicase single-molecule unzipping by skoch3 on 2008-06-14 23:31:19 as read along with 1 group Koch_Lab
  • Histone Octamer Instability under Single Molecule Experiment Conditions
    J. Biol. Chem., Vol. 280, No. 20. (20 May 2005), pp. 19958-19965.
    by Cyril Claudet, Dimitar Angelov, Philippe Bouvet, Stefan Dimitrov, Jan Bednar
    posted to biophysics chromatin native single-molecule by skoch3 on 2008-05-15 10:10:01 as ***** along with 1 group Koch_Lab
  • Chromatin Fibers, One-at-a-time
    Journal of Molecular Biology, Vol. 331, No. 1. (1 August 2003), pp. 1-19.
    by Jordanka Zlatanova, Sanford H Leuba
    posted to chromatin review single-molecule techniques by skoch3 on 2007-04-25 09:47:24 as ***** along with 1 group Koch_Lab
  • Probing Gene Expression in Live Cells, One Protein Molecule at a Time
    Science, Vol. 311, No. 5767. (17 March 2006), pp. 1600-1603.
    by Ji Yu, Jie Xiao, Xiaojia Ren, Kaiqin Lao, Sunney X Xie
    posted to expression gene in-vivo single-molecule by skoch3 on 2008-03-13 06:28:33 as ** along with 4 people dayjm balabu jiyu margaritis
  • Visualizing single DNA-bound proteins using DNA as a scanning probe
    Nature Methods, Vol. 4, No. 12. (11 November 2007), pp. 1031-1036.
    by Maarten C Noom, Bram van den Broek, Joost van Mameren, Gijs JL Wuite
    posted to biophysics dna dynamic force optical protein single-molecule spectroscopy tweezers by skoch3 on 2007-12-26 22:27:17 as ***** along with 1 group Koch_Lab
  • DNA overwinds when stretched
    Nature, Vol. 442, No. 7104. (12 July 2006), pp. 836-839.
    by Jeff Gore, Zev Bryant, Marcelo Nã¶llmann, Mai U Le, Nicholas R Cozzarelli, Carlos Bustamante
    posted to dna magnetic single-molecule by skoch3 on 2008-07-07 06:49:37 as read along with 1 group Koch_Lab
  • Direct Measurement of Local Chromatin Fluidity Using Optical Trap Modulation Force Spectroscopy
    Biophys. J., Vol. 91, No. 12. (15 December 2006), pp. 4632-4637.
    by T Roopa, GV Shivashankar
    posted to biophysics chromatin force mammalian optical single-molecule tweezers by skoch3 on 2007-05-10 08:29:20 as ***** along with 1 group Koch_Lab
  • A Comparison of Step-Detection Methods: How Well Can You Do?
    Biophys. J., Vol. 94, No. 1. (1 January 2008), pp. 306-319.
    by Brian C Carter, Michael Vershinin, Steven P Gross
    posted to biophysics detection kinesin single-molecule step by skoch3 on 2008-01-02 23:49:05 as *** along with 2 people and 1 group samjlord melting moernerlab
  • DNA looping kinetics analyzed using diffusive hidden markov model.
    Biophys J, Vol. 92, No. 8. (15 April 2007)
    by JF Beausang, C Zurla, C Manzo, D Dunlap, L Finzi, PC Nelson
    posted to beads biophysics brownian dna fluctuation hidden looping markov microspheres motion particle single-molecule tethered by skoch3 on 2007-03-29 21:08:22 as read along with 1 group Koch_Lab
  • Analysis of Kinetics in Noisy Systems: Application to Single Molecule Tethered Particle Motion
    Biophys. J., Vol. 93, No. 1. (1 July 2007), pp. 21-36.
    by F Vanzi, L Sacconi, FS Pavone
    posted to biophysics motion particle single-molecule tethered theory by skoch3 on 2007-06-11 05:31:47 as ** along with 1 person and 1 group ssfeldman Koch_Lab
  • Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies
    Nature, Vol. 437, No. 7056., pp. 231-234.
    by D Collin, F Ritort, C Jarzynski, SB Smith, I Tinoco, C Bustamante
    posted to crooks fluctuation jarzynski optical single-molecule theorem tweezers by skoch3 on 2008-01-02 20:09:42 as ** along with 1 person ruudvanleeuwen
  • Pulling a single chromatin fiber reveals the forces that maintain its higher-order structure.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 97, No. 1. (4 January 2000), pp. 127-132.
    by Y Cui, C Bustamante
    posted to chromatin single-molecule by skoch3 on 2008-05-15 00:06:33 as read along with 1 group Koch_Lab
  • Single Molecule Energetics of F1-ATPase Motor
    Biophys. J., Vol. 92, No. 5. (1 March 2007), pp. 1806-1812.
    by Eiro Muneyuki, Takahiro Watanabe-Nakayama, Tetsuya Suzuki, Masasuke Yoshida, Takayuki Nishizaka, Hiroyuki Noji
    posted to atpase single-molecule by skoch3 on 2007-02-20 06:29:34 as *** along with 1 group Koch_Lab
  • Forced Unfolding of Coiled-Coils in Fibrinogen by Single-Molecule AFM.
    Biophys J, Vol. 92, No. 5. (1 March 2007)
    by AE Brown, RI Litvinov, DE Discher, JW Weisel
    posted to afm dynamic fibrinogen force single-molecule spectroscopy by skoch3 on 2007-04-24 06:40:35 as *** along with 1 group Koch_Lab
  • Dynamic force spectroscopy of protein-DNA interactions by unzipping DNA.
    Phys Rev Lett, Vol. 91, No. 2. (11 July 2003)
    by SJ Koch, MD Wang
    posted to unzipping ufapa spectroscopy single-molecule protein force dynamic dna dfs by skoch3 on 2007-02-03 09:00:41 as read along with 1 person and 1 group TheLarry Koch_Lab
  • Single Molecule Force Spectroscopy on Polysaccharides by Atomic Force Microscopy
    Science, Vol. 275, No. 5304. (28 February 1997), pp. 1295-1297.
    by Matthias Rief, Filipp Oesterhelt, Berthold Heymann, Hermann E Gaub
    posted to single-molecule polysaccharide biophysics by skoch3 on 2008-09-22 08:16:23 as read along with 1 group Koch_Lab
  • Single-molecule experiments in vitro and in silico.
    Science, Vol. 316, No. 5828. (25 May 2007), pp. 1144-1148.
    by M Sotomayor, K Schulten
    posted to dynamic dynamics force in-silico molecular single-molecule smd spectroscopy by skoch3 on 2008-03-31 16:57:09 as ***** along with 2 people and 1 group choonpeng hsekiguc Koch_Lab
  • Probing the relation between force--lifetime--and chemistry in single molecular bonds.
    Annu Rev Biophys Biomol Struct, Vol. 30 (2001), pp. 105-128.
    by E Evans
    posted to classic dynamic force single-molecule spectroscopy by skoch3 on 2008-03-29 21:11:34 as read along with 1 person and 1 group hsekiguc Koch_Lab
  • Overstretching B-DNA: The Elastic Response of Individual Double-Stranded and Single-Stranded DNA Molecules
    Science, Vol. 271, No. 5250. (9 February 1996), pp. 795-799.
    by Steven B Smith, Yujia Cui, Carlos Bustamante
    posted to chain dna fjc freely-jointed overstretching single-molecule wlc worm-like by skoch3 on 2008-05-07 07:57:43 as read along with 1 person and 1 group phisics Koch_Lab
  • Polysaccharide elasticity governed by chair-boat transitions of the glucopyranose ring.
    Nature, Vol. 396, No. 6712. (17 December 1998), pp. 661-664.
    by PE Marszalek, AF Oberhauser, YP Pang, JM Fernandez
    posted to single-molecule polysaccharide biophysics by skoch3 on 2008-09-22 08:13:25 as read along with 1 group Koch_Lab
  • Single-Molecule Approach to Molecular Biology in Living Bacterial Cells
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 417-444.
    by Sunney X Xie, Paul J Choi, Gene W Li, Nam K Lee, Giuseppe Lia
    posted to microscopy single-molecule by ras on 2008-05-28 17:47:22 as ** along with 1 person and 1 group samjlord moernerlab
  • Single-Molecule DNA Sequencing of a Viral Genome
    Science, Vol. 320, No. 5872. (4 April 2008), pp. 106-109.
    by Timothy D Harris, Phillip R Buzby, Hazen Babcock, Eric Beer, Jayson Bowers, Ido Braslavsky, Marie Causey, Jennifer Colonell, James Dimeo, William J Efcavitch, Eldar Giladi, Jaime Gill, John Healy, Mirna Jarosz, Dan Lapen, Keith Moulton, Stephen R Quake, Kathleen Steinmann, Edward Thayer, Anastasia Tyurina, Rebecca Ward, Howard Weiss, Zheng Xie
    posted to genome sequencing single-molecule techniques virus by neils on 2008-04-08 05:25:46 as ** along with 15 people and 3 groups katiehumphry operon dchughes samjlord zwang cabbagezs kinestetika benlin caseybrown kjglennie melting austin ilyaf vmarshal jyuh moernerlab Microbial-Ecology microbiology_nijmegen
  • Transducer Binding Establishes Localized Interactions to Tune Sensory Rhodopsin II
    Structure, Vol. 16, No. 8. (06 August 2008), pp. 1206-1213.
    by D Cisneros, L Oberbarnscheidt, A Pannier, J Klare, J Helenius, M Engelhard, F Oesterhelt, D Muller
    posted to single-molecule rhodopsin protein-protein natronomonas interaction archaea by neils on 2008-10-08 02:43:20 as **
  • Myosin VI Walks "Wiggly" on Actin with Large and Variable Tilting
    Molecular Cell, Vol. 28, No. 6. (28 December 2007), pp. 954-964.
    by Yujie Sun, Schroeder, John F Beausang, Kazuaki Homma, Mitsuo Ikebe, Yale E Goldman
    posted to angle fixed-dipole fluorophore-angle myosin myosin-vi poltirf single-molecule by melting on 2008-02-29 19:52:36 as read along with 1 person cactus
  • Determination of the three-dimensional orientation of single molecules
    Opt. Lett., Vol. 33, No. 9. (1 May 2008), pp. 1020-1022.
    by Matthew R Foreman, Carlos M Romero, Peter Török
    posted to single-molecule orientation microscopy fluorescence by melting on 2008-09-09 01:26:00 as ** along with 1 person and 1 group samjlord moernerlab
  • Myosin V stepping mechanism
    Proceedings of the National Academy of Sciences, Vol. 104, No. 39. (25 September 2007), pp. 15328-15333.
    by Giovanni Cappello, Paolo Pierobon, Clementine Symonds, Lorenzo Busoni, J Christof, M Gebhardt, Matthias Rief, Jacques Prost
    posted to model molecular-motors myosin myosin-v single-molecule by melting on 2008-03-13 23:41:38 as ** along with 2 people cactus pierobon
  • A myosin motor that selects bundled actin for motility.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 28. (15 July 2008), pp. 9616-9620.
    by S Nagy, BL Ricca, MF Norstrom, DS Courson, CM Brawley, PA Smithback, RS Rock
    posted to bundled-actin fascin filopodia motor-navigation myosin myosin-x single-molecule by melting on 2008-07-29 20:24:06 as read
  • Fluorescent Probes for Chemical Transformations on the Single-Molecule Level
    Ann NY Acad Sci, Vol. 1130, No. 1. (1 May 2008), pp. 131-137.
    by Gregor Jung, Alexander Schmitt, Michaela Jacob, Babette Hinkeldey
    posted to chemistry-sensitive-fluorophore fluorophore single-molecule by melting on 2008-07-29 20:27:32 as ** along with 1 person and 1 group samjlord moernerlab
  • Single-molecule Chemistry and Biology Special Feature: New directions in single-molecule imaging and analysis.
    Proc Natl Acad Sci U S A, Vol. 104, No. 31. (31 July 2007), pp. 12596-12602.
    by WE Moerner
    posted to quals single-molecule superresolution by melting on 2008-03-08 03:47:43 as read along with 4 people and 1 group lechristophe samjlord karmarae yunpeic moernerlab
  • Myosin V Walks by Lever Action and Brownian Motion
    Science, Vol. 316, No. 5828. (25 May 2007), pp. 1208-1212.
    by Katsuyuki Shiroguchi, Kazuhiko Kinosita
    posted to myosin myosin-v single-molecule by melting on 2008-03-12 16:54:12 as read along with 4 people and 1 group samjlord ibschwartz junbo_yin cactus moernerlab
  • Following translation by single ribosomes one codon at a time
    Nature (09 March 2008)
    by Jin-Der Wen, Laura Lancaster, Courtney Hodges, Ana-Carolina Zeri, Shige H Yoshimura, Harry F Noller, Carlos Bustamante, Ignacio Tinoco
    posted to ribosome single-molecule translation by melting on 2008-03-13 23:34:06 as **** along with 3 people dchughes jonathanjacobs cactus
  • Advances in Single-Molecule Fluorescence Methods for Molecular Biology
    Annual Review of Biochemistry, Vol. 77, No. 1. (2008), pp. 51-76.
    by Chirlmin Joo, Hamza Balci, Yuji Ishitsuka, Chittanon Buranachai, Taekjip Ha
    posted to fluorescence review single-molecule by melting on 2008-08-02 00:14:01 as *** along with 2 people and 1 group jyuh samjlord moernerlab
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/tag/single-molecule

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