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タグ: pssm [9 articles]

Recent papers classified by the tag pssm.
  • Efficient representation and P-value computation for high-order Markov motifs
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i160-166.
    by Paulo G da Fonseca, Katia S Guimaraes, Marie-France Sagot
    posted to markov motif pssm p-value pwm by Stew on 2008-08-11 09:08:07 as ** along with 1 person Evangelia
  • PRINTS and its automatic supplement, prePRINTS.
    Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 400-402.
    by TK Attwood, P Bradley, DR Flower, A Gaulton, N Maudling, AL Mitchell, G Moulton, A Nordle, K Paine, P Taylor, A Uddin, C Zygouri
    posted to database fingerprints interpro prints pssm by siebertm on 2007-05-22 12:04:33 as * along with 1 person Cortel
  • Identification of Proteins Secreted by Malaria Parasite into Erythrocyte using SVM and PSSM profiles
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Ruchi Verma, Ajit Tiwari, Sukhwinder Kaur, Grish Varshney, Gajendra Raghava
    posted to bioinformatics erythrocyte machine-learning malaria prediction pssm secretion svm protein by neils on 2008-04-17 00:31:17 as ** along with 1 person arNQ
  • notes Automated prediction of protein function and detection of functional sites from structure.
    Proc Natl Acad Sci U S A, Vol. 101, No. 41. (12 October 2004), pp. 14754-14759.
    by F Pazos, MJ Sternberg
    posted to protein_structure pssm by kaarsinogen on 2006-04-17 19:12:50 as read along with 2 people chrn eweaver
  • PSSM-based prediction of DNA binding sites in proteins.
    BMC Bioinformatics, Vol. 6 (2005)
    by S Ahmad, A Sarai
    posted to 2005_2006_dnabp dna_binding protein-dna_interaction pssm by kaarsinogen on 2006-11-03 23:08:37 as ***
  • JASPAR: an open-access database for eukaryotic transcription factor binding profiles.
    Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004)
    by A Sandelin, W Alkema, P Engström, WW Wasserman, B Lenhard
    posted to binding pssm sites transcription by jguinney on 2006-09-04 17:47:14 as *** along with 4 people and 2 groups aalibes indigoviolet nklee heliopais EisenLab Motif Discovery
  • Using substitution probabilities to improve position-specific scoring matrices
    Comput. Appl. Biosci., Vol. 12, No. 2. (1 April 1996), pp. 135-143.
    by Jorja G Henikoff, Steven Henikoff
    posted to pssm by cjeans on 2008-03-15 01:22:39 as **
  • Profile analysis: detection of distantly related proteins.
    Proc Natl Acad Sci U S A, Vol. 84, No. 13. (July 1987), pp. 4355-4358.
    by M Gribskov, AD McLachlan, D Eisenberg
    posted to profile pssm by ca3295 on 2008-05-27 13:22:43 as ** along with 3 people dgront rabio Evangelia
  • notes On the power of profiles for transcription factor binding site detection.
    Stat Appl Genet Mol Biol, Vol. 2 (2003)
    by S Rahmann, T Müller, M Vingron
    posted to profile pssm statistics tfbs by bluto on 2007-03-15 17:19:06 as read along with 1 person lusk
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