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タグ: pooling [46 articles]

Recent papers classified by the tag pooling.
  • Pooling mRNA in microarray experiments and its effect on power
    Bioinformatics, Vol. 23, No. 10. (15 May 2007), pp. 1217-1224.
    by Wuyan Zhang, Alicia Carriquiry, Dan Nettleton, Jack C Dekkers
    posted to pooling by ugengma on 2007-05-28 11:29:05 as * along with 4 people jyuh jfr rmk ptrobajo
  • A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing.
    Nucleic acids research, Vol. 35, No. 19. (2007)
    posted to pooling sequencing by slevy03 on 2008-07-18 21:46:20 as ** along with 1 person alexisfjdufresne
  • Optimal pooling for genome re-sequencing with ultra-high-throughput short-read technologies.
    Bioinformatics (Oxford, England), Vol. 24, No. 13. (1 July 2008)
    posted to pooling sequencing by slevy03 on 2008-07-18 21:20:02 as **
  • Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
    Nature Methods, Vol. 5, No. 3. (10 February 2008), pp. 235-237.
    by Micah Hamady, Jeffrey J Walker, Kirk J Harris, Nicholas J Gold, Rob Knight
    posted to pooling sequencing by slevy03 on 2008-07-18 21:49:09 as ** along with 2 people jyuh sconlan
  • Parallel tagged sequencing on the 454 platform.
    Nature protocols, Vol. 3, No. 2. (2008), pp. 267-278.
    posted to pooling sequencing by slevy03 on 2008-07-18 21:37:59 as ** along with 1 person jyuh
  • A Market Framework for Pooling Opinions
    by David M Pennock, Michael P Wellman
    posted to opinion pooling prediction-market by scis0000001 on 2007-04-09 14:40:57 as **
  • A Study of the Impact of Representations in Information Retrieval Systems.
    (0 July 1982)
    by Jeffrey Katzer, Judith A Tessier, William Frakes, Das
    posted to collection inspec pooling by sanderso on 2008-03-05 14:08:49 as read
  • Extended Boolean information retrieval
    Commun. ACM, Vol. 26, No. 11. (November 1983), pp. 1022-1036.
    by Gerard Salton, Edward A Fox, Harry Wu
  • Pooling Designs And Nonadaptive Group Testing: Important Tools for DNA Sequencing (Series on Applied Mathematics)
    (19 June 2006)
    by Dingzhu Du, Frank Hwang
    posted to pooling quapo stats545 by rmk on 2007-09-10 20:06:51 as read
  • Biases induced by pooling samples in microarray experiments.
    Bioinformatics, Vol. 23, No. 13. (1 July 2007)
    by Tristan Mary-Huard, Jean-Jacques J Daudin, Michela Baccini, Annibale Biggeri, Avner Bar-Hen
    posted to microarray pooling stats545 by rmk on 2008-03-03 16:30:12 as *** along with 2 people jyuh shigepong
  • Bayesian inference for prevalence and diagnostic test accuracy based on dual-pooled screening
    Biostatistics, Vol. 7, No. 1. (January 2006), pp. 41-57.
    by Timothy E Hanson, Wesley O Johnson, Joseph L Gastwirth
    posted to pooling hts bayes by rmk on 2007-02-02 16:10:02 as **
  • A new pooling strategy for high-throughput screening: the Shifted Transversal Design.
    BMC Bioinformatics, Vol. 7 (2006)
    posted to design pooling quapo stats545 std by rmk on 2006-12-14 06:39:45 as read along with 1 person Ayest
  • Hypothesis Tests for and against a Simple Order among Proportions Estimated by Pooled Testing
    Biometrical Journal, Vol. 48, No. 5. (2006), pp. 792-804.
    by Joshua M Tebbs, Christopher R Bilder
    posted to pooling design by rmk on 2007-02-02 15:09:35 as ***
  • Uniform Coverage Designs for Molecule Selection
    pp. 99-109.
    by Lam
    posted to pooling hts by rmk on 2007-02-02 16:11:27 as **
  • On the utility of pooling biological samples in microarray experiments.
    Proc Natl Acad Sci U S A (8 March 2005)
    by C Kendziorski, R A A Irizarry, K-S S Chen, J D D Haag, M N N Gould
    posted to microarray pooling stats545 by rmk on 2008-03-03 16:36:49 as ** along with 4 people jyuh jtextori textoris jfr
  • poolHiTS: A Shifted Transversal Design based pooling strategy for high-throughput drug screening
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Raghunandan Kainkaryam, Peter Woolf
    posted to bioinfo cgt design pooling quapo std by rmk on 2008-08-17 22:45:37 as read along with 3 people reyez neils jyuh
  • Statistical Design of Pools Using Optimal Coverage and Minimal Collision
    Technometrics, Vol. 48, No. 1. (February 2006), pp. 133-143.
    by Katja S Remlinger, Jacqueline M Hughes-Oliver, Stanley S Young, Raymond L Lam
    posted to pooling by rmk on 2007-02-02 15:02:17 as read
  • Constructions of generalized superimposed codes with applications to group testing and conflict resolution in multiple access channels
    Theor. Comput. Sci., Vol. 306, No. 1-3. (2003), pp. 223-243.
    by Annalisa De Bonis, Ugo Vaccaro
    posted to cgt design gsc pooling by rmk on 2006-12-14 06:49:06 as read
  • Improved Combinatorial Group Testing Algorithms for Real-World Problem Sizes
    (18 May 2005)
    by David Eppstein, Michael T Goodrich, Daniel S Hirschberg
  • Interpool: interpreting smart-pooling results
    Bioinformatics, Vol. 24, No. 5. (1 March 2008), pp. 696-703.
    by Nicolas Thierry-Mieg, Gilles Bailly
    posted to pooling stats545 std by rmk on 2008-03-03 17:09:36 as read along with 2 people jyuh laughcry
  • PoooL: An efficient method for estimating haplotype frequencies from large DNA pools.
    Bioinformatics (Oxford, England) (23 June 2008)
    by Han Zhang, Hsin-Chou C Yang, Yaning Yang
    posted to bioinfo decode pooling by rmk on 2008-08-30 15:43:17 as *** along with 2 people APRegier jyuh
  • Pooled association genome scanning for alcohol dependence using 104,268 SNPs: Validation and use to identify alcoholism vulnerability loci in unrelated individuals from the collaborative study on the genetics of alcoholism.
    Am J Med Genet B Neuropsychiatr Genet (7 August 2006)
    by Catherine Johnson, Tomas Drgon, Qing-Rong R Liu, Donna Walther, Howard Edenberg, John Rice, Tatiana Foroud, George R R Uhl
    posted to assoc pooling by pcahan1 on 2006-08-11 21:44:20 as **
  • Correlated firing in macaque visual area MT: time scales and relationship to behavior.
    J Neurosci, Vol. 21, No. 5. (1 March 2001), pp. 1676-1697.
    by W Bair, E Zohary, WT Newsome
  • Tuning bandwidths for near-threshold stimuli in area MT.
    J Neurophysiol, Vol. 80, No. 2. (August 1998), pp. 762-770.
    by KH Britten, WT Newsome
  • Grid Colorings in Steganography
    IEEE Transactions on Information Theory, Vol. 53, No. 4. (April 2007), pp. 1547-1549.
    by Jessica Fridrich, Petr Lisonek
  • Calculation of detection and false alarm probabilities in spectrum pooling systems
    Communications Letters, IEEE, Vol. 9, No. 4. (2005), pp. 349-351.
    posted to detection formula of pooling probability spectrum by Majed on 2008-02-13 11:03:53 as **
  • notes Spectrum pooling: an innovative strategy for the enhancement of spectrum efficiency
    Communications Magazine, IEEE, Vol. 42, No. 3. (2004), pp. S8-14.
    by TA Weiss, FK Jondral
    posted to pooling spectrum by Majed on 2008-02-13 10:18:09 as **** along with 1 person fbernardo
  • Interpreting scan data acquired from multiple scanners: A study with Alzheimer's disease
    NeuroImage, Vol. 39, No. 3. (1 February 2008), pp. 1180-1185.
    by Cynthia M Stonnington, Geoffrey Tan, Stefan Kloppel, Carlton Chu, Bogdan Draganski, Jack, Kewei Chen, John Ashburner, Richard S Frackowiak
  • HAPLOPOOL: improving haplotype frequency estimation through DNA pools and phylogenetic modeling
    Bioinformatics, Vol. 23, No. 22. (15 November 2007), pp. 3048-3055.
    by Bonnie Kirkpatrick, Carlos S Armendariz, Richard M Karp, Eran Halperin
    posted to haplotype pooling software by jyuh on 2008-07-16 14:34:59 as ** along with 1 person ryanraaum
  • Pooling in systems biology becomes smart
    Nature Methods, Vol. 3, No. 3., pp. 161-162.
    by Nicolas Thierry-Mieg
    posted to hts pooling by jyuh on 2008-07-02 08:38:43 as ** along with 1 person Ayest
  • Geometric mean estimation from pooled samples.
    Chemosphere, Vol. 69, No. 3. (September 2007), pp. 371-380.
    by SP Caudill, WE Turner, DG Patterson
    posted to pooling by jyuh on 2008-06-22 15:16:03 as **
  • Applicability of DNA pools on 500K SNP microarrays for cost-effective initial screens in genomewide association studies
    BMC Genomics, Vol. 8 (04 July 2007), 214.
    by Sophia J Docherty, Lee M Butcher, Leonard C Schalkwyk, Robert Plomin
    posted to microarray pooling snp by jyuh on 2007-08-08 07:08:36 as **
  • PDA: Pooled DNA analyzer.
    BMC bioinformatics, Vol. 7 (2006)
    by HC Yang, CC Pan, CY Lin, CS Fann
    posted to microarray pooling by jyuh on 2008-06-25 07:33:03 as **
  • Genome-wide copy number analysis using copy number inferring tool (CNIT) and DNA pooling.
    Human mutation (9 May 2008)
    by Chien-Hsing H Lin, Mei-Chu C Huang, Ling-Hui H Li, Jer-Yuarn Y Wu, Yuan-Tsong T Chen, Cathy S J S Fann
    posted to cnv pooling by jyuh on 2008-07-25 06:52:47 as **
  • Multimarker analysis and imputation of multiple platform pooling-based genome-wide association studies.
    Bioinformatics (Oxford, England) (10 July 2008)
    by Nils Homer, Waibhav D D Tembe, Szabolcs Szelinger, Margot Redman, Dietrich A A Stephan, John V V Pearson, Stanley F F Nelson, David Craig
    posted to gwa imputation pooling by jyuh on 2008-07-16 13:49:19 as **
  • Estimation of ROC curves based on stably distributed biomarkers subject to measurement error and pooling mixtures.
    Stat Med, Vol. 27, No. 2. (30 January 2008), pp. 280-296.
    by A Vexler, EF Schisterman, A Liu
    posted to biomarker pooling roc by jyuh on 2008-03-09 00:54:44 as **
  • Analysis of pooled DNA samples on high density arrays without prior knowledge of differential hybridization rates.
    Nucleic acids research, Vol. 34, No. 7. (2006)
    posted to microarray pooling snp by jyuh on 2008-07-25 11:01:45 as **
  • An optimal DNA pooling strategy for progressive fine mapping.
    Genetica (28 May 2008)
    by Xiao-Fei F Chi, Xiang-Yang Y Lou, Mark C Yang, Qing-Yao Y Shu
    posted to pooling snp by jyuh on 2008-07-16 15:39:24 as **
  • New constructions of one- and two-stage pooling designs.
    J Comput Biol, Vol. 15, No. 2. (March 2008), pp. 195-205.
    by Y Cheng, DZ Du
    posted to pooling by jyuh on 2008-03-09 00:46:52 as **
  • Fractioned DNA pooling: a new cost-effective strategy for fine mapping of quantitative trait Loci.
    Genetics, Vol. 176, No. 4. (August 2007), pp. 2611-2623.
    by A Korol, Z Frenkel, L Cohen, E Lipkin, M Soller
    posted to pooling qtl by jyuh on 2007-08-26 15:13:57 as **
  • A hierarchical and modular approach to the discovery of robust associations in genome-wide association studies from pooled DNA samples
    BMC Genetics, Vol. 9 (14 January 2008), 6.
    by Paola Sebastiani, Zhenming Zhao, Maria M Abad-Grau, Alberto Riva, Stephen W Hartley, Amanda E Sedgewick, Alessandro Doria, Monty Montano, Efthymia Melista, Dellara Terry, Thomas T Perls, Martin H Steinberg, Clinton T Baldwin
    posted to gwa pooling by jyuh on 2008-02-29 12:43:26 as **
  • A pooling-deconvolution strategy for biological network elucidation
    Nature Methods, Vol. 3, No. 3. (17 February 2006), pp. 183-189.
    by Fulai Jin, Tony Hazbun, Gregory A Michaud, Michael Salcius, Paul F Predki, Stanley Fields, Jing Huang
    posted to hts pooling by jyuh on 2008-07-02 08:38:54 as ** along with 4 people Ayest gurkanbebek cjeans zwang
  • MPDA: Microarray pooled DNA analyzer
    BMC Bioinformatics, Vol. 9 (15 April 2008), 196.
    by Hsin-Chou Yang, Mei-Chu Huang, Ling-Hui Li, Chien-Hsing Lin, Alice LT Yu, Mitchell B Diccianni, Jer-Yuan Wu, Yuan-Tsong Chen, Cathy SJ Fann
    posted to microarray pooling software by jyuh on 2008-06-25 07:33:42 as ** along with 1 person jfr
  • Highly cost-efficient genome-wide association studies using DNA pools and dense SNP arrays.
    Nucleic Acids Res (14 February 2008)
    by Stuart Macgregor, Zhen Zhen Z Zhao, Anjali Henders, Martin G G Nicholas, Grant W W Montgomery, Peter M M Visscher
    posted to gwa microarray pooling by jyuh on 2008-02-27 15:57:37 as ****
  • Bayesian models for pooling microarray studies with multiple sources of replications.
    BMC Bioinformatics, Vol. 7 (2006)
    by EM Conlon, JJ Song, JS Liu
    posted to microarray_protocol pooling by jfr on 2007-01-08 13:35:39 as ** along with 1 person shigepong
  • Bias and the limits of pooling for large collections
    Information Retrieval, Vol. 10, No. 6. (26 December 2007), pp. 491-508.
    by Chris Buckley, Darrin Dimmick, Ian Soboroff, Ellen Voorhees
    posted to pooling sampling_bias test_collections by baaic on 2008-03-03 17:31:42 as ***** along with 1 person arjen
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