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タグ: molecular-signaling [116 articles]

Recent papers classified by the tag molecular-signaling.
  • A bottom-up approach to gene regulation
    Nature, Vol. 439, No. 7078. (16 February 2006), pp. 856-860.
    by Nicholas J Guido, Xiao Wang, David Adalsteinsson, David Mcmillen, Jeff Hasty, Charles R Cantor, Timothy C Elston, JJ Collins
    posted to collins collins_lab development evolution expression gene gene-expression gene_expression molecular-signaling morphogenesis networks noise regulation regulatory-cascades transcription transcriptional_regulation by samal on 2006-08-11 09:14:59 as ** along with 15 people and 2 groups raik rklancer snuppepuppan jyuh okarsligil bayesian balicea madhadron balabu johncumbers mmt proulx dbikard nklee tmmurali Bioinformatics SynBioSys
  • Everything you wanted to know about small RNA but were afraid to ask
    Laboratory Investigation, Vol. aop, No. current.
    by Scott D Boyd
    posted to gene-expression methods molecular-general molecular-signaling reviews rna by balicea on 2008-06-16 04:03:43 as ** along with 3 people and 1 group GustavoLacerda heliopais bootsy microRNA
  • Functionality of Intergenic Transcription: An Evolutionary Comparison
    PLoS Genetics, Vol. preprint, No. 2006. (1 August 2006)
    by Philipp Khaitovich, Janet Kelso, Henriette Franz, Johann Visagie, Thomas Giger, Sabrina Joerchel, Ekkehard Petzold, Richard E Green, Michael Lachmann, Svante Pääbo
    posted to evolution gene-expression general-physiology molecular-general molecular-signaling phylogeny by balicea on 2006-09-24 20:49:05 as ***
  • Cross-talk of vitamin D and glucocorticoids in hippocampal cells
    Journal of Neurochemistry, Vol. 96, No. 2. (2006), pp. 500-509.
    by Darja Obradovic, Hinrich Gronemeyer, Beat Lutz, Theo Rein
    posted to cross-talk molecular-general molecular-signaling neuro-chem neuro-hormonal by balicea on 2008-06-22 00:52:01 as ** along with 1 person shoshin
  • The evolving role of microRNAs in animal gene expression.
    Bioessays, Vol. 28, No. 5. (13 April 2006), pp. 449-452.
    by Katlin B B Massirer, Amy E E Pasquinelli
    posted to evolution gene-expression molecular-general molecular-signaling by balicea on 2006-04-17 19:25:12 as *** along with 4 people and 4 groups marcius eckart_bindewald tardigrade dchughes G4ID BioinfoCIPF SGU-CIPF Genetics-of-Gambling
  • Gene regulation at the single-cell level.
    Science, Vol. 307, No. 5717. (25 March 2005), pp. 1962-1965.
    by N Rosenfeld, JW Young, U Alon, PS Swain, MB Elowitz
    posted to adaptive-systems ecophysiology gene-expression molecular-general molecular-signaling morphogenesis by balicea on 2006-03-21 03:55:53 as *** along with 13 people rklancer snuppepuppan kentsis Toze bayesian JKelly555 balabu comb mhucka timflutre margaritis csgillespie vladimirov
  • Generation of induced pluripotent stem cells without Myc from mouse and human fibroblasts.
    Nat Biotechnol (30 November 2007)
    by Masato Nakagawa, Michiyo Koyanagi, Koji Tanabe, Kazutoshi Takahashi, Tomoko Ichisaka, Takashi Aoi, Keisuke Okita, Yuji Mochiduki, Nanako Takizawa, Shinya Yamanaka
    posted to animal-model molecular-general molecular-signaling physiological-remodeling stem-cells by balicea on 2007-12-30 07:55:47 as *** along with 4 people and 1 group jyuh mikaelhuss wsjames shayashi Oxford Virology
  • Toward a unifying theory of bone remodeling.
    Bone, Vol. 26, No. 1. (January 2000), pp. 1-6.
    by RB Martin
    posted to adaptive-systems development gene-expression molecular-signaling morphogenesis musculoskeletal_systems regeneration by balicea on 2006-01-20 21:00:15 as ***
  • A temporal map of transcription factor activity: mef2 directly regulates target genes at all stages of muscle development.
    Dev Cell, Vol. 10, No. 6. (June 2006), pp. 797-807.
    by T Sandmann, LJ Jensen, JS Jakobsen, MM Karzynski, MP Eichenlaub, P Bork, EE Furlong
    posted to evo-devo evolutionary-genomics evolutionary-proteomics genome-interactome genome-transcriptome molecular-signaling musculoskeletal_systems regulatory-cascades by balicea on 2008-06-16 03:55:19 as ** along with 2 people larsjuhljensen roys
  • Induced pluripotency in human cells
    Nature Methods, Vol. 5, No. 1., pp. 24-24.
    by Natalie de Souza
    posted to molecular-signaling physiological-remodeling stem-cells by balicea on 2007-12-31 08:03:39 as *** along with 1 person jyuh
  • Relief of microRNA-mediated translational repression in human cells subjected to stress.
    Cell, Vol. 125, No. 6. (16 June 2006), pp. 1111-1124.
    by SN Bhattacharyya, R Habermacher, U Martine, EI Closs, W Filipowicz
    posted to cell-models ecophysiology gene-expression molecular-signaling phenotype-to-genotype rna by balicea on 2008-01-17 20:51:41 as *** along with 4 people tardigrade Alexander_Kanitz delenca slonik
  • Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs
    Nature, Vol. aop, No. current. (30 January 2005)
    by Lee P Lim, Nelson C Lau, Philip Garrett-Engele, Andrew Grimson, Janell M Schelter, John Castle, David P Bartel, Peter S Linsley, Jason M Johnson
    posted to microarray molecular-general molecular-signaling regulatory-cascades by balicea on 2006-07-25 06:34:40 as *** along with 16 people and 5 groups giovenko jyuh jtextori sanjeevpillai jfr tabu mtagaya neveaire cgessmu ealloza skoch koller lp2 heliopais maralena caseybrown Biostatistics Computational-Genomics Bioinformatics Neuroscience microRNA
  • Accelerated evolution of the ASPM gene controlling brain size begins prior to human brain expansion.
    PLoS Biol, Vol. 2, No. 5. (May 2004)
    by N Kouprina, A Pavlicek, GH Mochida, G Solomon, W Gersch, YH Yoon, R Collura, M Ruvolo, JC Barrett, CG Woods, CA Walsh, J Jurka, V Larionov
    posted to evolution molecular-general molecular-signaling by balicea on 2006-08-17 03:35:09 as *** along with 1 person chrys
  • G protein signaling: insights from new structures.
    Sci STKE, Vol. 2004, No. 218. (3 February 2004)
    by AM Preininger, HE Hamm
    posted to molecular-general molecular-signaling by balicea on 2006-02-19 03:44:44 as *** along with 2 people ryang tmt
  • A microRNA array reveals extensive regulation of microRNAs during brain development
    RNA, Vol. 9, No. 10. (1 October 2003), pp. 1274-1281.
    by Anna M Krichevsky, Kevin S King, Christine P Donahue, Konstantin Khrapko, Kenneth S Kosik
    posted to development microarray molecular-general molecular-signaling by balicea on 2006-07-25 06:33:06 as *** along with 1 person skoch
  • Molecular origins of rapid and continuous morphological evolution
    PNAS, Vol. 101, No. 52. (28 December 2004), pp. 18058-18063.
    by John W Fondon, Harold R Garner
    posted to evolution evolutionary-genomics evolutionary-proteomics functional-genome genotype-to-phenotype molecular-general molecular-signaling phenotype-to-genotype by balicea on 2008-06-22 05:55:22 as ** along with 3 people jryanstevens jphekman bpcusack
  • Molecular Evolutionary Analyses of the Odorant-Binding Protein Gene <it>Gp-9</it> in Fire Ants and Other <it>Solenopsis</it> Species
    Molecular Biology and Evolution, Vol. 22, No. 10. (October 2005), pp. 2090-2103.
    by Michael J Krieger, Kenneth G Ross
    posted to animal-model evolution gene-expression general-physiology molecular-general molecular-signaling by balicea on 2006-08-25 00:10:50 as read
  • Revealing posttranscriptional regulatory elements through network-level conservation.
    PLoS Comput Biol, Vol. 1, No. 7. (December 2005)
    by CS Chan, O Elemento, S Tavazoie
    posted to gene-expression molecular-signaling by balicea on 2006-08-25 01:47:02 as *** along with 4 people and 2 groups tharris koller grahamc Garamonfok C. elegans / WormBase ParkinsonLab_at_MaRS
  • A comparison of the human and chimpanzee olfactory receptor gene repertoires
    Genome Res., Vol. 15, No. 2. (1 February 2005), pp. 224-230.
    by Yoav Gilad, Orna Man, Gustavo Glusman
    posted to animal-model brain-anatomy evolution molecular-general molecular-signaling sensory-systems by balicea on 2006-01-14 23:27:53 as *** along with 3 people and 1 group yama_tah penka bpcusack Nie
  • The selective values of alleles in a molecular network model are context dependent.
    Genetics, Vol. 166, No. 4. (April 2004), pp. 1715-1725.
    by J Peccoud, KV Velden, D Podlich, C Winkler, L Arthur, M Cooper
    posted to ecophysiology modeling-and-simulation molecular-general molecular-signaling by balicea on 2006-09-08 03:27:06 as *** along with 4 people rklancer monod RMGraze christiw
  • Quantitative and evolutionary biology of alternative splicing: how changing the mix of alternative transcripts affects phenotypic plasticity and reaction norms
    Heredity, Vol. aop, No. current. (2006), pp. 1-10.
    by JH Marden
    posted to ecophysiology evolution evolutionary-genomics gene-expression genome-structure molecular-signaling neuro-mechanics regulatory-cascades reviews by balicea on 2008-01-17 21:28:40 as *** along with 1 person mimulus_99
  • Defects in the rhodopsin kinase gene in the Oguchi form of stationary night blindness.
    Nat Genet, Vol. 15, No. 2. (February 1997), pp. 175-178.
    by S Yamamoto, KC Sippel, EL Berson, TP Dryja
    posted to ecophysiology gene-expression molecular-signaling neuro-disorders perception sensory-systems by balicea on 2006-01-08 21:45:12 as *** along with 1 person morven
  • Extracting protein regulatory networks with graphical models.
    Proteomics, Vol. 7 Suppl 1 (September 2007), pp. 51-59.
    by M Grzegorczyk
    posted to applied-math cross-talk evolutionary-proteomics genotype-to-phenotype machine-learning modeling-and-simulation molecular-signaling networks regulatory-cascades by balicea on 2008-01-02 07:47:23 as *** along with 1 person jyuh
  • Gene microarray analysis of human brain arteriovenous malformations.
    Neurosurgery, Vol. 54, No. 2. (February 2004)
    by T Hashimoto, MT Lawton, G Wen, GY Yang, T Chaly, CL Stewart, HK Dressman, NM Barbaro, DA Marchuk, WL Young
    posted to brain-anatomy gene-expression microarray molecular-signaling neuro-chem neuro-disorders neuro-tech by balicea on 2006-01-03 23:47:51 as ***
  • Gene regulatory network growth by duplication.
    Nat Genet, Vol. 36, No. 5. (May 2004), pp. 492-496.
    by SA Teichmann, MM Babu
    posted to ecophysiology gene-expression molecular-general molecular-signaling networks by balicea on 2006-01-09 03:23:47 as *** along with 9 people and 2 groups snuppepuppan korakot LeightonP hununu briann jtextori tny yoh Ema Philosophy_of_Information Blog_and_Wiki_Research
  • The SELF-PRUNING gene of tomato regulates vegetative to reproductive switching of sympodial meristems and is the ortholog of CEN and TFL1.
    Development, Vol. 125, No. 11. (June 1998), pp. 1979-1989.
    by L Pnueli, L Carmel-Goren, D Hareven, T Gutfinger, J Alvarez, M Ganal, D Zamir, E Lifschitz
    posted to development ecophysiology evolution molecular-general molecular-signaling morphogenesis by balicea on 2006-02-01 23:12:05 as *** along with 1 person imouthesmp
  • ras oncogenes in human cancer: a review [published erratum appears in Cancer Res 1990 Feb 15;50(4):1352]
    Cancer Res, Vol. 49, No. 17. (1 September 1989), pp. 4682-4689.
    by Jl Bos
    posted to evolution microarray molecular-general molecular-signaling by balicea on 2006-06-08 00:56:48 as *** along with 1 person laurabailey
  • AMPK and transcriptional regulation.
    Front Biosci, Vol. 13 (2008), pp. 3022-3033.
    by SL McGee, M Hargreaves
    posted to functional-genome gene-expression growth-regulation molecular-signaling musculoskeletal_systems regulatory-cascades by balicea on 2008-08-02 06:20:02 as ** along with 2 people arne maimoni
  • Molecular evolution of the primate developmental genes MSX1 and PAX9.
    Mol Biol Evol, Vol. 23, No. 3. (March 2006), pp. 644-654.
    by GH Perry, BC Verrelli, AC Stone
    posted to development evolution molecular-general molecular-signaling by balicea on 2006-07-27 19:19:49 as *** along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
  • Architectonics of the human cerebral cortex and transmitter receptor fingerprints: reconciling functional neuroanatomy and neurochemistry.
    Eur Neuropsychopharmacol, Vol. 12, No. 6. (December 2002), pp. 587-599.
    by K Zilles, N Palomero-Gallagher, C Grefkes, F Scheperjans, C Boy, K Amunts, A Schleicher
    posted to brain-anatomy molecular-signaling neuro-connectivity neuro-tech operational-neuro by balicea on 2006-03-26 05:06:31 as *** along with 1 person jclau
  • Constructing transcriptional regulatory networks
    Genes Dev., Vol. 19, No. 13. (1 July 2005), pp. 1499-1511.
    by Alexandre Blais, Brian D Dynlacht
    posted to adaptive-systems gene-expression microarray molecular-signaling networks neuro-tech by balicea on 2006-01-03 03:57:48 as *** along with 6 people and 2 groups brant xico tabu braingrind lusk jtomasch EisenLab WetBiology
  • A Global Pathway Crosstalk Network
    Bioinformatics (23 April 2008), btn200.
    by Yong Li, Pankaj Agarwal, Dilip Rajagopalan
    posted to cross-talk functional-genome genotype-to-phenotype molecular-signaling networks regulatory-cascades by balicea on 2008-06-20 16:14:48 as ** along with 6 people thomaskelder maralena bootsy renatomilani AlexanderPico jyuh
  • Interaction between Smad7 and beta-Catenin: Importance for Transforming Growth Factor beta-Induced Apoptosis
    Mol. Cell. Biol., Vol. 25, No. 4. (15 February 2005), pp. 1475-1488.
    by Sofia Edlund, So Y Lee, Susanne Grimsby, Shouthing Zhang, Pontus Aspenstrom, Carl-Henrik Heldin, Marene Landstrom
    posted to cross-talk general-physiology molecular-general molecular-signaling regulatory-cascades by balicea on 2008-01-03 06:45:04 as *** along with 1 person jyuh
  • Sociogenomics: social life in molecular terms.
    Nat Rev Genet, Vol. 6, No. 4. (April 2005), pp. 257-270.
    by GE Robinson, CM Grozinger, CW Whitfield
    posted to cultural-evolution gene-expression genome-association genome-structure genome-variation genotype-to-phenotype molecular-general molecular-signaling neuro-genetics by balicea on 2008-02-15 02:18:39 as ** along with 1 person and 1 group ladygoat CGREL
  • Dynamic changes of gene expression in hypoxia-induced right ventricular hypertrophy.
    Am J Physiol Heart Circ Physiol, Vol. 286, No. 3. (March 2004)
    by S Sharma, H Taegtmeyer, J Adrogue, P Razeghi, S Sen, K Ngumbela, MF Essop
    posted to gene-expression molecular-signaling musculoskeletal_systems robustness by balicea on 2007-12-11 18:58:28 as *** along with 1 person jen_drake
  • Beyond transcription factors: The role of chromatin modifying enzymes in regulating transcription required for memory
    Learn. Mem., Vol. 15, No. 7. (26 June 2008), pp. 460-467.
    by Ruth M Barrett, Marcelo A Wood
    posted to learning-and-memory molecular-general molecular-signaling by balicea on 2008-07-21 14:37:56 as **
  • A complex oscillating network of signaling genes underlies the mouse segmentation clock.
    Science, Vol. 314, No. 5805. (8 December 2006), pp. 1595-1598.
    by ML Dequéant, E Glynn, K Gaudenz, M Wahl, J Chen, A Mushegian, O Pourquié
    posted to biological-rhythms evo-devo gene-expression molecular-signaling morphogenesis networks regulatory-cascades by balicea on 2008-01-14 19:18:40 as *** along with 3 people and 1 group brant ghattem maralena EisenLab
  • Regulating mammalian transcription with RNA.
    Trends Biochem Sci, Vol. 30, No. 12. (December 2005), pp. 655-658.
    by DR Corey
    posted to development ecophysiology evolution molecular-general molecular-signaling by balicea on 2006-03-03 22:06:19 as *** along with 2 people and 2 groups eckart_bindewald dchughes G4ID Genetics-of-Gambling
  • Reprogramming of human somatic cells to pluripotency with defined factors
    Nature (23 December 2007)
    by In-Hyun Park, Rui Zhao, Jason A West, Akiko Yabuuchi, Hongguang Huo, Tan A Ince, Paul H Lerou, William M Lensch, George Q Daley
    posted to cell-models molecular-signaling regulatory-cascades stem-cells by balicea on 2008-01-21 03:55:59 as *** along with 8 people and 1 group jyuh ruppj stevezhang sebastien_vigneau wsjames shayashi dvaidpz pdgf-88 Oxford Virology
  • Osteoblastic responses to TGF-beta during bone remodeling.
    Mol Biol Cell, Vol. 9, No. 7. (July 1998), pp. 1903-1918.
    by A Erlebacher, EH Filvaroff, JQ Ye, R Derynck
    posted to adaptive-systems development gene-expression molecular-signaling morphogenesis movement-science musculoskeletal_systems regeneration by balicea on 2006-01-20 20:58:31 as ***
  • Molecular imaging: Bridging the gap between neuroradiology and neurohistology.
    Histol Histopathol, Vol. 19, No. 2. (April 2004), pp. 651-668.
    by S Heckl, R Pipkorn, T Nägele, U Vogel, W Küker, K Voight
    posted to brain-anatomy molecular-general molecular-signaling neuro-connectivity neuro-tech operational-neuro by balicea on 2006-03-26 05:08:06 as *** along with 2 people xtizon jclau
  • Crosstalk of tight junction components with signaling pathways
    Biochimica et Biophysica Acta (BBA) - Biomembranes, Vol. In Press, Corrected Proof
    by Lorenza Gonzalez-Mariscal, Rocio Tapia, David Chamorro
    posted to complexity cross-talk molecular-signaling networks regulatory-cascades by balicea on 2008-01-03 06:44:05 as *** along with 2 people jyuh blackm0k
  • Discovery of Gene Function by Expression Profiling of the Malaria Parasite Life Cycle
    Science, Vol. 301, No. 5639. (12 September 2003), pp. 1503-1508.
    by Karine G Le Roch, Yingyao Zhou, Peter L Blair, Muni Grainger, Kathleen J Moch, David J Haynes, De La, Anthony A Holder, Serge Batalov, Daniel J Carucci, Elizabeth A Winzeler
    posted to animal-model development gene-expression informatics molecular-signaling by balicea on 2008-06-09 02:18:10 as ** along with 3 people Sharpshoot GeeSharpMinor shuzhens
  • Cellular mechanisms of cerebellar LTD.
    Trends Neurosci, Vol. 21, No. 9. (September 1998), pp. 401-407.
    by H Daniel, C Levenes, F Crépel
    posted to brain-anatomy learning-and-memory molecular-signaling movement-science musculoskeletal_systems neuro-chem neuro-coding neuroplasticity neuro-timing reviews by balicea on 2008-01-22 02:54:17 as *** along with 1 person JohnSchlerf
  • Extremely rapid induction of outer hair cell apoptosis in the chinchilla cochlea following exposure to impulse noise
    Hearing Research, Vol. 211, No. 1-2. (January 2006), pp. 16-25.
    by Bo H Hu, Donald Henderson, Thomas M Nicotera
    posted to development general-physiology molecular-general molecular-signaling sensory-systems by balicea on 2006-09-08 01:34:01 as *** along with 2 people yabadak CharlesM
  • Convergence of multiple signaling cascades at glycogen synthase kinase 3: Edg receptor-mediated phosphorylation and inactivation by lysophosphatidic acid through a protein kinase C-dependent intracellular pathway.
    Mol Cell Biol, Vol. 22, No. 7. (April 2002), pp. 2099-2110.
    by X Fang, S Yu, JL Tanyi, Y Lu, JR Woodgett, GB Mills
    posted to cross-talk general-physiology molecular-general molecular-signaling regulatory-cascades by balicea on 2008-01-02 07:42:47 as *** along with 1 person jyuh
  • Short RNAs Repress Translation after Initiation in Mammalian Cells
    Molecular Cell, Vol. 21, No. 4. (17 February 2006), pp. 533-542.
    by Christian P Petersen, Marie-Eve Bordeleau, Jerry Pelletier, Phillip A Sharp
    posted to gene-expression molecular-general molecular-signaling morphogenesis neuro-chem neuro-timing by balicea on 2006-02-19 03:46:31 as *** along with 2 people and 3 groups andersbj dchughes microRNA G4ID Genetics-of-Gambling
  • AMP-activated protein kinase (AMPK) action in skeletal muscle via direct phosphorylation of PGC-1alpha.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 29. (17 July 2007), pp. 12017-12022.
    by S Jäger, C Handschin, J St-Pierre, BM Spiegelman
    posted to functional-genome gene-expression molecular-signaling musculoskeletal_systems regulatory-cascades by balicea on 2008-08-02 06:21:10 as ** along with 1 person jyuh
  • Shaping the future of interactome networks
    Genome Biology, Vol. 8 (01 November 2007), 316.
    by Patrick Aloy
    posted to evolution evolutionary-genomics evolutionary-proteomics gene-gene genotype-to-phenotype molecular-signaling networks regulatory-cascades systems-biology by balicea on 2008-01-13 19:34:35 as *** along with 1 person ruvido
  • Evolutionary expansion and anatomical specialization of synapse proteome complexity.
    Nature neuroscience (8 June 2008)
    by Richard D D Emes, Andrew J J Pocklington, Christopher N G N Anderson, Alex Bayes, Mark O O Collins, Catherine A A Vickers, Mike D R D Croning, Bilal R R Malik, Jyoti S S Choudhary, J Douglas D Armstrong, Seth G N G Grant
    posted to animal-model brain-anatomy comparative-neuro evolution evolutionary-proteomics evolution-of-intelligence evolvability molecular-signaling neuro-computation phylogeny synaptic-complexity by balicea on 2008-06-15 04:50:28 as **** along with 2 people and 1 group brian sekulerlab VisionLab
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