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タグ: metabolism [604 articles]

Recent papers classified by the tag metabolism.
  • Predicting synthetic rescues in metabolic networks
    Mol Syst Biol, Vol. 4 (12 February 2008)
    by Adilson E Motter, Natali Gulbahce, Eivind Almaas, Albert-Laszlo Barabasi
    posted to metabolism network prediction by zwang on 2008-02-17 10:43:10 as ** along with 9 people tmmurali debasis kentsis bootsy biomcgary cabbagezs westoll shikin shung
  • Metabolic engineering delivers next-generation biofuels
    Nature Biotechnology, Vol. 26, No. 3., pp. 298-299.
    by Jay D Keasling, Howard Chou
    posted to metabolism by zwang on 2008-03-19 14:27:04 as **
  • Dynamics and Design Principles of a Basic Regulatory Architecture Controlling Metabolic Pathways
    PLoS Biology, Vol. 6, No. 6. (1 June 2008), e146.
    by Chen-Shan Chin, Victor Chubukov, Emmitt R Jolly, Joe Derisi, Hao Li
    posted to regulatory pathway metabolism by zwang on 2008-06-27 04:07:53 as ** along with 4 people jjray marck michaelbarton djkt
  • Systems analysis of metabolism in the pathogenic trypanosomatid Leishmania major
    Mol Syst Biol, Vol. 4 (25 March 2008)
    by Arvind K Chavali, Jeffrey D Whittemore, James A Eddy, Kyle T Williams, Jason A Papin
    posted to metabolism systematic by zwang on 2008-03-27 05:08:56 as **
  • The liver pharmacological and xenobiotic gene response repertoire
    Mol Syst Biol, Vol. 4 (25 March 2008)
    by Georges Natsoulis, Cecelia I Pearson, Jeremy Gollub, Eynon, Joe Ferng, Ramesh Nair, Radha Idury, May D Lee, Mark R Fielden, Richard J Brennan, Alan H Roter, Kurt Jarnagin
    posted to clustering gene human metabolism pathway by zwang on 2008-03-27 05:07:04 as ** along with 5 people and 1 group shikin jyuh caseybrown aubinhon ptrobajo Integrative_biology_behavior
  • The stability and robustness of metabolic states: identifying stabilizing sites in metabolic networks
    Mol Syst Biol, Vol. 3 (13 November 2007)
    by Sergio Grimbs, Joachim Selbig, Sascha Bulik, Hermann-Georg Holzhutter, Ralf Steuer
    posted to metabolism network by zwang on 2007-11-15 02:06:06 as * along with 3 people and 1 group JeremyZucker cjeans Ema MetabolicModeling
  • Energy metabolism of fish brain
    Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology, Vol. 131, No. 3. (March 2002), pp. 271-296.
    by Jose L Soengas, Manuel Aldegunde
    posted to brain cortisol metabolism reviewing by Zman on 2008-03-13 07:27:50 as **
  • Biochemical indicators of thermal stress in Tilapia aurea (Steindachner)
    Journal of Fish Biology, Vol. 29, No. 2. (1986), pp. 243-255.
    by KR Kindle, DH Whitmore
    posted to cortisol metabolism order temperature thermal by Zman on 2008-03-13 07:16:15 as **
  • Substrate mobilization and hormonal changes in rainbow trout (Oncorhynchus mykiss, L.) and common carp (Cyprinus carpio, L.) during deep hypoxia and subsequent recovery
    Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology, Vol. 166, No. 7. (10 November 1996), pp. 443-452.
    by M Van Raaij, G Van den Thillart, G Vianen, D Pit, P Balm, A Steffens
    posted to cortisol hypoxia metabolism order stress by Zman on 2008-03-13 07:11:22 as **
  • Living Fast, Dying When? The Link between Aging and Energetics
    J. Nutr., Vol. 132, No. 6. (1 June 2002), pp. 1583S-1597.
    by John R Speakman, Colin Selman, Jane S Mclaren, Jean E Harper
    posted to aging metabolism mitochondria ros by Zman on 2008-02-06 06:04:22 as **
  • Glucose metabolism and cancer
    Current Opinion in Cell Biology, Vol. 18, No. 6. (December 2006), pp. 598-608.
    by Reuben J Shaw
    posted to review metabolism glucose cancer by zhlei on 2008-07-14 17:44:53 as **
  • Tumor cell metabolism: cancer's Achilles' heel.
    Cancer cell, Vol. 13, No. 6. (June 2008), pp. 472-482.
    by G Kroemer, J Pouyssegur
    posted to metabolism glycolysis cancer by zhlei on 2008-07-14 23:17:08 as **
  • SIRT1 regulates hepatocyte lipid metabolism through activating AMP-activated protein kinase.
    The Journal of biological chemistry (14 May 2008)
    by Xiuyun Hou, Shanqin Xu, Karlene A A Maitland-Toolan, Kaori Sato, Bingbing Jiang, Yasuo Ido, Fan Lan, Kenneth Walsh, Michel Wierzbicki, Tony J J Verbeuren, Richard A A Cohen
    posted to sirt1 metabolism by zhlei on 2008-05-18 22:10:53 as ** along with 1 person jyuh
  • Phosphoinositide 3-kinase/Akt signaling pathway and its therapeutical implications for human acute myeloid leukemia
    Leukemia, Vol. aop, No. current.
    by AM Martelli, M Nyåkern, G Tabellini, R Bortul, PL Tazzari, C Evangelisti, L Cocco,
    posted to akt metabolism by zhlei on 2007-11-04 13:56:16 as **
  • When transcriptome meets metabolome: fast cellular responses of yeast to sudden relief of glucose limitation
    Mol Syst Biol, Vol. 2 (2006)
    by MTAP Kresnowati, WA van Winden, MJH Almering, A Proell, C Ras, TA Knijnenburg, PAS Daran-Lapujade, JT Pronk, JJ Heijnen, JM Daran
    posted to dynamics metabolism network simulation yeast by yyin02 on 2006-09-26 20:14:55 as ** along with 2 people alexg westoll
  • Reconstruction of metabolic networks from genome data and analysis of their global structure for various organisms.
    Bioinformatics, Vol. 19, No. 2. (22 January 2003), pp. 270-277.
    by H Ma, AP Zeng
    posted to metabolism network by yoh on 2006-01-25 15:13:35 as ** along with 3 people kuhn eweaver tny
  • The small world of metabolism
    Nat Biotech, Vol. 18, No. 11. (November 2000), pp. 1121-1122.
    by David A Fell, Andreas Wagner
    posted to metabolism small-world by yoh on 2006-01-25 15:08:40 as read along with 4 people Borelli livingthingdan dullhunk web20student
  • notes A Transgenic Model of Visceral Obesity and the Metabolic Syndrome
    Science, Vol. 294, No. 5549. (7 December 2001), pp. 2166-2170.
    by Hiroaki Masuzaki, Janice Paterson, Hiroshi Shinyama, Nicholas M Morton, John J Mullins, Jonathan R Seckl, Jeffrey S Flier
    posted to transgenic metabolism annual2004 11beta-hsd1 by yavanna on 2008-04-25 14:49:03 as **
  • notes AMP-activated protein kinase: the energy charge hypothesis revisited.
    BioEssays : news and reviews in molecular, cellular and developmental biology, Vol. 23, No. 12. (December 2001), pp. 1112-1119.
    by DG Hardie, SA Hawley
    posted to metabolism annual2004 ampk by yavanna on 2008-04-28 08:24:08 as **
  • Endocrine regulation of energy metabolism by the skeleton.
    Cell, Vol. 130, No. 3. (10 August 2007), pp. 456-469.
    by NK Lee, H Sowa, E Hinoi, M Ferron, JD Ahn, C Confavreux, R Dacquin, PJ Mee, MD McKee, DY Jung, Z Zhang, JK Kim, F Mauvais-Jarvis, P Ducy, G Karsenty
    posted to bone endocrine metabolism sleleton by yavanna on 2008-02-15 00:12:58 as ****
  • notes Reversal of Obesity- and Diet-Induced Insulin Resistance with Salicylates or Targeted Disruption of Ikkbeta
    Science, Vol. 293, No. 5535. (31 August 2001), pp. 1673-1677.
    by Minsheng Yuan, Nicky Konstantopoulos, Jongsoon Lee, Lone Hansen, Zhi-Wei Li, Michael Karin, Steven E Shoelson
    posted to obesity metabolism insulin_resistance ikkbeta annual2004 by yavanna on 2008-04-25 12:02:48 as ** along with 3 people booker csainsbury jryanstevens
  • A Sweet Sensor for Size-Conscious Bacteria
    Cell, Vol. 130, No. 2. (27 July 2007), pp. 216-218.
    by Daisuke Shiomi, William Margolin
    posted to metabolism microbiology by xingxu on 2007-08-02 15:57:50 as **
  • Calculating the statistical significance of changes in pathway activity from gene expression data.
    Stat Appl Genet Mol Biol, Vol. 3 (2004)
    by J Rahnenführer, FS Domingues, J Maydt, T Lengauer
    posted to expression metabolism pathway_analysis statistics by xingxu on 2007-12-27 21:02:20 as ** along with 1 person dragonrez
  • Adaptations to Climate in Candidate Genes for Common Metabolic Disorders.
    PLoS Genet, Vol. 4, No. 2. (15 February 2008)
    by Angela M M Hancock, David B B Witonsky, Adam S S Gordon, Gidon Eshel, Jonathan K K Pritchard, Graham Coop, Anna Di Rienzo
    posted to assocation climate evolution metabolism by xingxu on 2008-04-17 13:15:43 as ** along with 1 group Fasting, food and evolution
  • Interplay of circadian clocks and metabolic rhythms.
    Annu Rev Genet, Vol. 40 (2006), pp. 409-448.
    by H Wijnen, MW Young
    posted to circadian clock metabolism oscillator periodic review rhythm by xico on 2007-02-13 02:01:08 as **** along with 1 group WetBiology
  • Mitoferrin is essential for erythroid iron assimilation
    Nature, Vol. 440, No. 7080., pp. 96-100.
    by George C Shaw, John J Cope, Liangtao Li, Kenneth Corson, Candace Hersey, Gabriele E Ackermann, Babette Gwynn, Amy J Lambert, Rebecca A Wingert, David Traver, Nikolaus S Trede, Bruce A Barut, Yi Zhou, Emmanuel Minet, Adriana Donovan, Alison Brownlie, Rena Balzan, Mitchell J Weiss, Luanne L Peters, Jerry Kaplan, Leonard I Zon, Barry H Paw
    posted to iron metabolism by wxg119 on 2006-11-06 14:32:59 as **
  • Knock-out of SO1377 gene, which encodes the member of a conserved hypothetical bacterial protein family COG2268, results in alteration of iron metabolism, increased spontaneous mutation and hydrogen peroxide sensitivity in Shewanella oneidensis MR-1
    BMC Genomics, Vol. 7, No. 1. (2006)
    by Weimin Gao, Yongqing Liu, Carol Giometti, Sandra Tollaksen, Tripti Khare, Liyou Wu, Dawn Klingeman, Matthew Fields, Jizhong Zhou
    posted to hypothetical iron metabolism protein by wxg119 on 2006-06-13 13:53:38 as **
  • A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases.
    BMC Bioinformatics, Vol. 5, No. 1. (9 June 2004)
    by ML Green, PD Karp
    posted to bayesian enzyme metabolism pathway by wnpx on 2006-07-26 20:53:49 as ** along with 4 people JeremyZucker tmmurali eweaver shung
  • The effect of fetal pig size and stage of gestation on tissue fatty acid metabolism and profile
    Reproduction, Vol. 129, No. 6. (1 June 2005), pp. 757-763.
    by Christopher J Mcneil, Angela M Finch, Kenneth R Page, Steve D Clarke, Cheryl J Ashworth, Harry J Mcardle
    posted to fetal gestation metabolism of pig size stage by wirawan on 2008-03-13 10:24:21 as **
  • Fanconi-Bickel syndrome--the original patient and his natural history, historical steps leading to the primary defect, and a review of the literature.
    Eur J Pediatr, Vol. 157, No. 10. (October 1998), pp. 783-797.
    by R Santer, R Schneppenheim, D Suter, J Schaub, B Steinmann
    posted to metabolism ndv by wilvc on 2007-05-05 12:34:32 as read along with 1 group UWNICU
  • Ten categories of statistical errors: a guide for research in endocrinology and metabolism.
    Am J Physiol Endocrinol Metab, Vol. 286, No. 4. (April 2004)
    by TH Holmes
    posted to statistics metabolism error endocrinology bias by wandall on 2007-12-21 15:55:04 as **
  • Genetic and Non-Genetic Operators in ALECSYS
    Evolutionary Computation, Vol. 1, No. 2. (1993), pp. 151-164.
    by Marco Dorigo
    posted to dynamics metabolism network simulation yeast by vahid on 2007-04-06 00:32:42 as ****
  • Human metabolic pathways of dietary flavonoids and cinnamates.
    Biochem Soc Trans, Vol. 28, No. 2. (February 2000), pp. 16-22.
    by G Williamson, AJ Day, GW Plumb, D Couteau
    posted to cinnamate flavonoid human metabolism quercetin by uz_labu_laimi on 2007-04-06 20:10:51 as **
  • NADPH-dependent metabolism of 17beta-estradiol and estrone to polar and nonpolar metabolites by human tissues and cytochrome P450 isoforms.
    Steroids, Vol. 70, No. 4. (April 2005), pp. 225-244.
    by BT Zhu, AJ Lee
    posted to 17beta-oestradiol cytochrome_p450 human metabolism oestrone by uz_labu_laimi on 2007-04-06 00:53:25 as **
  • Metabolism of indole-3-acetic acid in Arabidopsis.
    Plant physiology, Vol. 118, No. 1. (September 1998), pp. 285-296.
    by A Ostin, M Kowalyczk, RP Bhalerao, G Sandberg
    posted to auxin metabolism by TristanBitardFeildel on 2008-04-10 16:15:59 as ** along with 1 group VirtualPlants
  • Is metabolism necessary?
    Br J Philos Sci, Vol. 50, No. 2. (1 June 1999), pp. 231-248.
    by MA Boden
    posted to metabolism autopoiesis by tomhebbron on 2008-07-08 19:14:04 as **
  • The puzzle of the Krebs citric acid cycle: Assembling the pieces of chemically feasible reactions, and opportunism in the design of metabolic pathways during evolution
    Journal of Molecular Evolution, Vol. 43, No. 3. (1996), pp. 293-303.
    by Enrique Meléndez-Hevia, Thomas Waddell, Marta Cascante
    posted to metabolism evolution by tomhebbron on 2008-06-14 12:33:42 as **
  • Evolutionary optimization of metabolic pathways. Theoretical reconstruction of the stoichiometry of ATP and NADH producing systems
    Bulletin of Mathematical Biology, Vol. 63, No. 1. (17 January 2001), pp. 21-55.
    by Oliver Ebenhöh, Reinhart Heinrich
    posted to metabolism evolution by tomhebbron on 2008-06-14 12:32:57 as **
  • Comparative Genomics and Protein Domain Graph Analyses Link Ubiquitination and RNA Metabolism
    Journal of Molecular Biology, Vol. 357, No. 1. (17 March 2006), pp. 9-17.
    by Ignasi J Lucas, Vicente Arnau, Ignacio Marin
    posted to comparative domain metabolism by tny on 2006-06-06 10:20:02 as **
  • Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis.
    Proc Natl Acad Sci U S A, Vol. 99, No. 6. (19 March 2002), pp. 3695-3700.
    by H Akashi, T Gojobori
    posted to aminoacid_composition comparative enzyme metabolism by tny on 2006-06-19 05:51:53 as ** along with 1 person bjorns
  • The Escherichia coli MG1655 in silico metabolic genotype: Its definition, characteristics, and capabilities
    PNAS, Vol. 97, No. 10. (9 May 2000), pp. 5528-5533.
    by JS Edwards, BO Palsson
    posted to bacteria metabolism network pathway by tny on 2006-04-10 08:35:32 as ** along with 1 person fishtank
  • Metabolic pathways in the post-genome era.
    Trends Biochem Sci, Vol. 28, No. 5. (May 2003), pp. 250-258.
    by JA Papin, ND Price, SJ Wiback, DA Fell, BO Palsson
    posted to metabolism network pathway by tny on 2006-04-10 07:31:05 as ** along with 2 people and 1 group camster alexg dbk-lab
  • The Activity Reaction Core and Plasticity of Metabolic Networks.
    PLoS Comput Biol, Vol. 1, No. 7. (16 December 2005)
    by Eivind Almaas, Zoltán N N Oltvai, Albert-László L Barabási
    posted to comparative metabolism network reaction by tny on 2006-05-19 16:02:51 as ** along with 2 people kentsis koller
  • Functional stoichiometric analysis of metabolic networks.
    Bioinformatics, Vol. 21, No. 22. (15 November 2005), pp. 4176-4180.
    by R Urbanczik, C Wagner
    posted to metabolism network by tny on 2006-05-19 14:44:20 as **
  • Combining bioinformatics resources for the structural modelling of eukaryotic metabolic networks.
    Genome Inform Ser Workshop Genome Inform, Vol. 16, No. 1. (2005), pp. 223-232.
    by C Gille, S Hoffmann, HG Holzhütter
    posted to mashup metabolism network by tny on 2006-05-19 14:43:00 as **
  • Evolution of metabolic networks by gain and loss of enzymatic reaction in eukaryotes
    Gene, Vol. 365 (3 January 2006), pp. 88-94.
    by Tsuyoshi Tanaka, Kazuho Ikeo, Takashi Gojobori
    posted to enzyme evolution metabolism by tny on 2006-05-31 15:54:27 as **
  • Influence of metabolic network structure and function on enzyme evolution.
    Genome Biol, Vol. 7, No. 5. (9 May 2006)
    by Dennis Vitkup, Peter Kharchenko, Andreas Wagner
    posted to enzyme evolution metabolism network by tny on 2006-05-31 15:49:42 as ** along with 2 people JeremyZucker mdstobbe
  • Metabolic pathways variability and sequence/networks comparisons.
    BMC Bioinformatics, Vol. 7 (2006)
    by K Tun, PK Dhar, MC Palumbo, A Giuliani
    posted to alignment comparative metabolism network by tny on 2006-05-19 14:31:06 as **
  • Small-molecule metabolism: an enzyme mosaic
    Trends in Biotechnology, Vol. 19, No. 12. (1 December 2001), pp. 482-486.
    by Sarah A Teichmann, Stuart C Rison, Janet M Thornton, Monica Riley, Julian Gough, Cyrus Chothia
    posted to domain_combination enzyme metabolism by tny on 2006-05-31 15:32:15 as **
  • Scale-Free Behavior in Protein Domain Networks
    Mol Biol Evol, Vol. 18, No. 9. (1 September 2001), pp. 1694-1702.
    by Stefan Wuchty
    posted to comparative domain_interaction metabolism network by tny on 2006-05-19 13:59:11 as ** along with 1 person mariopradeep
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