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タグ: membrane [698 articles]

Recent papers classified by the tag membrane.
  • Co-evolving residues in membrane proteins
    Bioinformatics, Vol. 23, No. 24. (15 December 2007), pp. 3312-3319.
    by Angelika Fuchs, Antonio J Martin-Galiano, Matan Kalman, Sarel Fleishman, Nir Ben-Tal, Dmitrij Frishman
    posted to co-evolution membrane protein residue by zwang on 2007-12-10 03:52:09 as *** along with 5 people and 2 groups operon breden cjeans blasco_morozzo phoenixzxl SFUAntibodyResearch signal-duplication
  • Identification of membrane proteins by tandem mass spectrometry of protein ions
    Proceedings of the National Academy of Sciences, Vol. 104, No. 36. (4 September 2007), pp. 14330-14335.
    by Joe Carroll, Matthew C Altman, Ian M Fearnley, John E Walker
    posted to massspectrometry membrane protein by zwang on 2007-11-01 02:05:39 as ** along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
  • Cooperative Gating and Spatial Organization of Membrane Proteins through Elastic Interactions
    PLoS Computational Biology, Vol. 3, No. 5. (1 May 2007), e81.
    by Tristan Ursell, Kerwyn C Huang, Eric Peterson, Rob Phillips
    posted to interaction membrane protein by zwang on 2007-05-26 04:54:34 as **
  • AP-3 Directs the Intracellular Trafficking of HIV-1 Gag and Plays a Key Role in Particle Assembly
    Cell, Vol. 120, No. 5. (11 March 2005), pp. 663-674.
    by Xinhong Dong, Hua Li, Aaron Derdowski, Lingmei Ding, Atuhani Burnett, Xuemin Chen, Timothy R Peters, Terence S Dermody, Elvin Woodruff, Jaang-Jiun Wang, Paul Spearman
    posted to assembly hiv membrane traffic by zukeboy on 2005-09-23 11:58:14 as read
  • Biochemical Characterization of Rous Sarcoma Virus MA Protein Interaction with Membranes
    J. Virol., Vol. 79, No. 10. (15 May 2005), pp. 6227-6238.
    by Amanda K Dalton, Paul S Murray, Diana Murray, Volker M Vogt
    posted to gag interaction matrix membrane rsv by zukeboy on 2006-01-02 18:09:57 as ** along with 1 person kupopo
  • Black Holes : The Membrane Paradigm
    (10 September 1986)
    by Kirk S Thorne
    posted to bh book membrane by yshibu on 2006-04-10 07:22:15 as ** along with 1 person robertoalamino
  • Performance of the general amber force field in modeling aqueous POPC membrane bilayers.
    J Comput Chem, Vol. 28, No. 12. (12 April 2007), pp. 2051-2058.
    by Balázs Jójárt, Tamás A A Martinek
    posted to amber dynamics md membrane modeling theory by xdeupi on 2007-06-26 13:32:45 as ** along with 2 people and 1 group easybakemuffin viktor21614 LabCompMed
  • Molecular dynamics simulations of bovine rhodopsin: influence of protonation states and different membrane-mimicking environments.
    J Mol Model (Online) (25 October 2005), pp. 1-16.
    by Birgit Schlegel, Wolfgang Sippl, Hans-Dieter D Höltje
    posted to md membrane rhodopsin by xdeupi on 2005-11-04 22:46:37 as ** along with 1 person and 1 group saravan LabCompMed
  • Molecular simulations and lipid-protein interactions: potassium channels and other membrane proteins.
    Biochem Soc Trans, Vol. 33, No. Pt 5. (October 2005), pp. 916-920.
    by MS Sansom, PJ Bond, SS Deol, A Grottesi, S Haider, ZA Sands
    posted to gpcr md membrane by xdeupi on 2005-11-04 22:45:26 as *** along with 1 person and 1 group dimka LabCompMed
  • Evaluating Tilt Angles of Membrane-Associated Helices: Comparison of Computational and NMR Techniques
    Biophys. J., Vol. 90, No. 5. (1 March 2006), pp. 1650-1660.
    by Martin B Ulmschneider, Mark S Sansom, Alfredo Di Nola
    posted to helix membrane modeling structure transmembrane by xdeupi on 2006-02-10 09:49:58 as ***** along with 2 people and 1 group thaliana loison LabCompMed
  • Helix-packing motifs in membrane proteins.
    Proc Natl Acad Sci U S A (5 September 2006)
    by R F S F Walters, W F F Degrado
    posted to folding helix membrane modeling sequence structure transmembrane by xdeupi on 2006-09-13 10:25:08 as **** along with 4 people and 1 group thaliana dgront sebk chgjb LabCompMed
  • Molecular dynamics simulation of the human adenosine A3 receptor: agonist induced conformational changes of Trp243
    Journal of Computer-Aided Molecular Design, Vol. 20, No. 10-11. (October 2006), pp. 673-684.
    by Hallmen, Christian, Wiese, Michael
    posted to dynamics lipids md membrane by xdeupi on 2007-03-12 14:22:10 as ** along with 1 group LabCompMed
  • The Calpha ---H...O hydrogen bond: a determinant of stability and specificity in transmembrane helix interactions.
    Proc Natl Acad Sci U S A, Vol. 98, No. 16. (31 July 2001), pp. 9056-9061.
    by A Senes, I Ubarretxena-Belandia, DM Engelman
    posted to folding gly hbond membrane transmembrane by xdeupi on 2006-05-22 10:17:00 as ** along with 1 person and 1 group thaliana LabCompMed
  • Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions.
    J Mol Biol, Vol. 296, No. 3. (25 February 2000), pp. 921-936.
    by A Senes, M Gerstein, DM Engelman
    posted to dimer folding gly helix membrane transmembrane by xdeupi on 2006-05-22 10:15:33 as read along with 1 group LabCompMed
  • The role of extra-membranous inter-helical loops in helix-helix interactions.
    Protein Eng Des Sel, Vol. 18, No. 12. (December 2005), pp. 563-570.
    by MB Ulmschneider, DP Tieleman, MS Sansom
    posted to dynamics helix loops md membrane transmembrane by xdeupi on 2006-03-06 09:46:32 as read along with 2 people and 1 group thaliana allanlo LabCompMed
  • Effect of different treatments of long-range interactions and sampling conditions in molecular dynamic simulations of rhodopsin embedded in a dipalmitoyl phosphatidylcholine bilayer.
    J Comput Chem (31 January 2007)
    by Arnau Cordomí, Olle Edholm, Juan J J Perez
    posted to dynamics md membrane rhodopsin theory by xdeupi on 2007-06-25 10:30:55 as ** along with 2 people and 1 group patricia arnaucordomi LabCompMed
  • Role of cholesterol in the function and organization of G-protein coupled receptors.
    Prog Lipid Res, Vol. 45, No. 4. (July 2006), pp. 295-333.
    by TJ Pucadyil, A Chattopadhyay
    posted to gpcr lipids membrane by xdeupi on 2007-04-10 18:46:46 as ** along with 1 person and 2 groups wsjames LabCompMed Oxford Virology
  • Dynamic models of G-protein coupled receptor dimers: indications of asymmetry in the rhodopsin dimer from molecular dynamics simulations in a POPC bilayer.
    J Comput Aided Mol Des (7 November 2006)
    by Marta Filizola, Simon X Wang, Harel Weinstein
    posted to activation dynamics gpcr lipids md membrane rhodopsin structure by xdeupi on 2006-11-14 16:42:29 as ** along with 1 group LabCompMed
  • Setting up and running molecular dynamics simulations of membrane proteins.
    Methods, Vol. 41, No. 4. (April 2007), pp. 475-488.
    by C Kandt, WL Ash, D Peter Tieleman
    posted to dynamics md membrane modeling review transmembrane by xdeupi on 2007-03-26 10:15:17 as ***** along with 1 person and 2 groups sobolevnrm LabCompMed baker-group
  • The three-dimensional structure of bovine rhodopsin determined by electron cryomicroscopy.
    J Biol Chem, Vol. 278, No. 50. (12 December 2003), pp. 50217-50225.
    by A Krebs, PC Edwards, C Villa, J Li, GF Schertler
    posted to crystallography gpcr membrane rhodopsin structure by xdeupi on 2006-07-25 15:17:32 as ** along with 1 group LabCompMed
  • Molecular Dynamics Simulations of GlpF in a Micelle vs in a Bilayer: Conformational Dynamics of a Membrane Protein as a Function of Environment.
    J Phys Chem B Condens Matter Mater Surf Interfaces Biophys, Vol. 109, No. 1. (13 January 2005), pp. 575-582.
    by G Patargias, PJ Bond, SS Deol, MS Sansom
    posted to crystallography dynamics membrane structure transmembrane by xdeupi on 2006-07-24 10:25:16 as ** along with 1 group LabCompMed
  • Bacteriorhodopsin Folds into the Membrane against an External Force.
    J Mol Biol (6 January 2006)
    by Max Kessler, Kay E E Gottschalk, Harald Janovjak, Daniel J J Muller, Hermann E E Gaub
    posted to folding membrane by xdeupi on 2006-01-30 09:27:58 as ** along with 1 group LabCompMed
  • Interhelical hydrogen bonds and spatial motifs in membrane proteins: polar clamps and serine zippers.
    Proteins, Vol. 47, No. 2. (1 May 2002), pp. 209-218.
    by L Adamian, J Liang
    posted to hbond helix membrane ser by xdeupi on 2006-01-27 14:29:10 as ** along with 1 person and 1 group thaliana LabCompMed
  • Solving the membrane protein folding problem
    Nature, Vol. 438, No. 7068. (30 November 2005), pp. 581-589.
    by James U Bowie
    posted to folding membrane by xdeupi on 2006-01-27 12:40:48 as ** along with 3 people and 1 group thaliana Odi sebk LabCompMed
  • Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs.
    Curr Opin Struct Biol, Vol. 14, No. 4. (August 2004), pp. 465-479.
    by A Senes, DE Engel, WF DeGrado
    posted to folding gly membrane pro-kink sequence ser structure transmembrane by xdeupi on 2006-05-22 10:55:10 as **** along with 1 person and 1 group thaliana LabCompMed
  • Conformational dynamics of M2 helices in KirBac channels: helix flexibility in relation to gating via molecular dynamics simulations.
    Biochemistry, Vol. 44, No. 44. (8 November 2005), pp. 14586-14594.
    by A Grottesi, C Domene, B Hall, MS Sansom
    posted to activation channel dynamics md membrane modeling transmembrane by xdeupi on 2006-02-20 09:24:41 as read along with 1 person and 1 group dimka LabCompMed
  • Molecular dynamics simulations of large integral membrane proteins with an implicit membrane model.
    J Phys Chem B Condens Matter Mater Surf Interfaces Biophys, Vol. 110, No. 1. (12 January 2006), pp. 548-556.
    by S Tanizaki, M Feig
    posted to dynamics membrane modeling transmembrane by xdeupi on 2006-02-20 09:15:18 as ** along with 1 person and 1 group dimka LabCompMed
  • ZPRED: Predicting the distance to the membrane center for residues in alpha-helical membrane proteins.
    Bioinformatics, Vol. 22, No. 14. (15 July 2006)
    by E Granseth, H Viklund, A Elofsson
    posted to helix loops membrane modeling structure transmembrane by xdeupi on 2006-09-05 10:16:39 as ***** along with 2 people and 1 group thaliana chrn LabCompMed
  • How lipids and proteins interact in a membrane: a molecular approach.
    Mol Biosyst, Vol. 1, No. 3. (September 2005), pp. 203-212.
    by AG Lee
    posted to activation lipids membrane by xdeupi on 2006-09-05 10:14:58 as *** along with 1 person and 4 groups piscinero Fluid-Mechanics-and-Thermal-Science-Research Computational_Systems_Biology XMLDataManagement LabCompMed
  • A combinatorial pattern discovery approach for the prediction of membrane dipping (re-entrant) loops.
    Bioinformatics, Vol. 22, No. 14. (15 July 2006)
    by G Lasso, JF Antoniw, JG Mullins
    posted to membrane secondary-structure by wouterboomsma on 2006-07-31 17:13:55 as **
  • Studies on Calcium Dependence Reveal Multiple Modes of Action for Triptolide
    Chemistry & Biology, Vol. 12, No. 12. (December 2005), pp. 1259-1268.
    by Stephanie J Leuenroth, Craig M Crews
    posted to cell locialise membrane on by wmanyi on 2006-12-20 03:47:21 as ***
  • Multi-membrane solutions of D = 11 supergravity
    Physics Letters B, Vol. 253, No. 1-2. (3 January 1991), pp. 113-118.
    by MJ Duff, KS Stelle
    posted to membrane supergravity by willrubens on 2007-10-15 17:32:16 as ***
  • An ultra-thin PDMS membrane as a bio/micronano interface: fabrication and characterization
    Biomedical Microdevices, Vol. 9, No. 4. (August 2007), pp. 587-595.
    by Thangawng, Abel, Ruoff, Rodney, Swartz, Melody, Glucksberg, Matthew
    posted to chambers membrane nanofabrication pdms by weezerific on 2008-04-16 22:52:59 as read along with 1 person freddan
  • Single-Molecule Spectroscopic Characterization of Light-Harvesting 2 Complexes Reconstituted into Model Membranes
    Biophys. J., Vol. 93, No. 1. (1 July 2007), pp. 183-191.
    by Martin F Richter, Jurgen Baier, Richard J Cogdell, Jurgen Kohler, Silke Oellerich
    posted to membrane single-molecule by wduim on 2007-08-08 01:45:43 as **
  • A New Look at Lipid-Membrane Structure in Relation to Drug Research
    Pharmaceutical Research, Vol. 15, No. 10. (1 October 1998), pp. 1507-1519.
    by Ole G Mouritsen, Kent Jørgensen
    posted to lipid membrane by viktor21614 on 2007-08-01 14:42:53 as ** along with 1 person andreasauerwein
  • On the preference of tryptophan for membrane interfaces: Insights from n-methylation of tryptophans in gramicidin channels
    J. Biol. Chem. (11 June 2008), M802074200.
    by Haiyan Sun, Denise V Greathouse, Olaf S Andersen, Roger E Koeppe
    posted to tryptophan membrane by viktor21614 on 2008-06-20 10:24:20 as **
  • Drug-phospholipid interactions. 2. Predicting the sites of drug distribution using n-octanol/water and membrane/water distribution coefficients
    Journal of Pharmaceutical Sciences, Vol. 86, No. 9. (1997), pp. 1034-1039.
    by Patrick Barton, Andrew M Davis, Dennis J Mccarthy, Peter JH Webborn
    posted to drug membrane by viktor21614 on 2007-08-01 14:16:03 as **
  • Benzodiazepine localisation at the lipid-water interface: effect of membrane composition and drug chemical structure
    Biochimica et Biophysica Acta (BBA) - Biomembranes, Vol. 1418, No. 1. (14 April 1999), pp. 221-231.
    by Daniel A Garcia, Maria A Perillo
    posted to drug membrane by viktor21614 on 2007-08-01 14:11:10 as **
  • Biogenesis of peroxisomes. Topogenesis of the peroxisomal membrane and matrix proteins
    FEBS Journal, Vol. 272, No. 10. (2005), pp. 2362-2372.
    by Ines Heiland, Ralf Erdmann
    posted to biogenesis membrane peroxisome by viktor21614 on 2007-07-30 21:02:52 as **
  • The interactions of the N-terminal fusogenic peptide of HIV-1 gp41 with neutral phospholipids
    European Biophysics Journal, Vol. 28, No. 5. (12 June 1999), pp. 427-436.
    by C Curtain, Frances Separovic, Katherine Nielsen, David Craik, Yong Zhong, Alan Kirkpatrick
    posted to membrane by viktor21614 on 2007-07-30 19:58:00 as **
  • Phospholipid phase transitions in homogeneous nanometer scale bilayer discs
    FEBS Letters, Vol. 556, No. 1-3. (2 January 2004), pp. 260-264.
    by Andrew W Shaw, Mark A Mclean, Stephen G Sligar
    posted to membrane by viktor21614 on 2007-07-30 19:56:29 as **
  • Characterization of oleic acid and propranolol oleate mesomorphism using 13C solid-state nuclear magnetic resonance spectroscopy (SSNMR)
    Journal of Pharmaceutical Sciences, Vol. 89, No. 10. (2000), pp. 1286-1295.
    by Kieran J Crowley, Robert T Forbes, Peter York, David C Apperley, Håkan Nyqvist, Ola Camber
    posted to membrane ssnmr by viktor21614 on 2007-07-30 19:54:59 as **
  • Drug-Induced Phospholipidosis: Are There Functional Consequences?
    Experimental Biology and Medicine, Vol. 226, No. 9. (1 October 2001), pp. 825-830.
    by Mark J Reasor, Sam Kacew
    posted to membrane phospholipidosis by viktor21614 on 2007-07-30 19:52:50 as **
  • Real-time imaging of drug-membrane interactions by atomic force microscopy
    Biochimica et Biophysica Acta (BBA) - Biomembranes, Vol. 1664, No. 2. (30 August 2004), pp. 198-205.
    by A Berquand, Mingeot-Leclercq, YF Dufrene
    posted to membrane by viktor21614 on 2007-07-30 19:46:28 as **
  • Wild-type Escherichia coli Cells Regulate the Membrane Lipid Composition in a “Window” between Gel and Non-lamellar Structures
    J. Biol. Chem., Vol. 271, No. 12. (22 March 1996), pp. 6801-6809.
    by Sven Morein, Ann-Sofie Andersson, Leif Rilfors, Göran Lindblom
    posted to membrane by viktor21614 on 2007-08-09 10:07:06 as ** along with 1 person netterpaladin
  • Cell surface organization by the membrane skeleton
    Current Opinion in Cell Biology, Vol. 8, No. 4. (August 1996), pp. 566-574.
    by Akihiro Kusumi, Yasushi Sako
    posted to membrane by viktor21614 on 2007-09-06 13:15:21 as ** along with 1 person andreasauerwein
  • Surface active drugs: self-association and interaction with membranes and surfactants. Physicochemical and biological aspects
    Biochimica et Biophysica Acta (BBA) - Biomembranes, Vol. 1508, No. 1-2. (23 November 2000), pp. 210-234.
    by Shirley Schreier, Sonia V Malheiros, Eneida de Paula
    posted to drug membrane by viktor21614 on 2007-09-06 13:13:14 as ** along with 1 person andreasauerwein
  • Membrane partitioning: distinguishing bilayer effects from the hydrophobic effect.
    Biochemistry, Vol. 32, No. 25. (29 June 1993), pp. 6307-6312.
    by WC Wimley, SH White
    posted to membrane by viktor21614 on 2007-09-06 13:09:49 as ** along with 1 person andreasauerwein
  • Proton-enhanced 13C nuclear magnetic resonance of lipids and biomembranes.
    Proc Natl Acad Sci U S A, Vol. 71, No. 12. (December 1974), pp. 5062-5067.
    by J Urbina, JS Waugh
    posted to cp_nmr lipid membrane by viktor21614 on 2007-12-02 11:34:49 as **
  • Novel NMR tools to study structure and dynamics of biomembranes
    Chemistry and Physics of Lipids, Vol. 116, No. 1-2. (June 2002), pp. 135-151.
    by Klaus Gawrisch, Nadukkudy V Eldho, Ivan V Polozov
    posted to membrane nmr by viktor21614 on 2007-07-30 14:29:55 as ** along with 1 person andreasauerwein
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