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タグ: mass-spectrometry [117 articles]

Recent papers classified by the tag mass-spectrometry.
  • Prediction of peptides observable by mass spectrometry applied at the experimental set level
    BMC Bioinformatics, Vol. 8, No. Suppl 7. (2007)
    by William Sanders, Susan Bridges, Fiona Mccarthy, Bindu Nanduri, Shane Burgess
    posted to mass-spectrometry by yalexeev on 2008-02-08 15:45:31 as ** along with 1 person jyuh
  • notes Ion flux composition in HBr/Cl[sub 2]/O[sub 2] and HBr/Cl[sub 2]/O[sub 2]/CF[sub 4] chemistries during silicon etching in industrial high-density plasmas
    Journal of Vacuum Science & Technology B: Microelectronics and Nanometer Structures, Vol. 20, No. 5. (2002), pp. 2137-2148.
  • notes Mass spectrometry studies of resist trimming processes in HBr/O[sub 2] and Cl[sub 2]/O[sub 2] chemistries
    Journal of Vacuum Science & Technology B: Microelectronics and Nanometer Structures, Vol. 23, No. 1. (2005), pp. 103-112.
    by E Pargon, O Joubert, T Chevolleau, G Cunge, Songlin Xu, Thorsten Lill
  • Mass spectrometric detection of reactive neutral species: Beam-to-background ratio
    Journal of Vacuum Science & Technology A: Vacuum, Surfaces, and Films, Vol. 17, No. 5. (1999), pp. 2447-2455.
    by Harmeet Singh, John W Coburn, David B Graves
    posted to dispositifs-experimentaux mass-spectrometry by these_morel on 2008-07-23 09:52:48 as **
  • notes Nitrogen dissociation in a low pressure cylindrical ICP discharge studied by actinometry and mass spectrometry
    Journal of Physics D: Applied Physics, Vol. 38, No. 24. (2005), pp. 4278-4289.
    by T Czerwiec, F Greer, DB Graves
  • Mass spectrometry: Principles and applications
    (14 January 2007)
    by Edmond de Hoffmann
    posted to dispositifs-experimentaux mass-spectrometry by these_morel on 2008-07-23 09:45:12 as **
  • Plasma etching of refractory metals (W, Mo, Ta) and silicon in SF6 and SF6-O2. An analysis of the reaction products
    Plasma Chemistry and Plasma Processing, Vol. 5, No. 4. (1 December 1985), pp. 333-351.
    by A Picard, G Turban
  • Analysis of amphetamines and fentanyls by atmospheric pressure desorption/ionization on silicon mass spectrometry and matrix-assisted laser desorption/ionization mass spectrometry and its application to forensic analysis of drug seizures.
    J Mass Spectrom (15 February 2005)
    by Katja Pihlainen, Kestutis Grigoras, Sami Franssila, Raimo Ketola, Tapio Kotiaho, Risto Kostiainen
    posted to mass-spectrometry by Terkko on 2005-03-03 13:08:07 as **
  • Mass spectrometry for proteomics.
    Current opinion in chemical biology (18 August 2008)
    by Xuemei Han, Aaron Aslanian, John R R Yates
    posted to mass-spectrometry proteomics by sjcockell on 2008-08-26 14:18:33 as **
  • Robust Prediction of the MASCOT Score for an Improved Quality Assessment in Mass Spectrometric Proteomics.
    Journal of proteome research (16 August 2008)
    by Thomas Koenig, Bjoern H Menze, Marc Kirchner, Flavio Monigatti, Kenneth C Parker, Thomas Patterson, Judith J Steen, Fred A Hamprecht, Hanno Steen
    posted to mascot mass-spectrometry peptide-mass-fingerprint by sjcockell on 2008-08-21 15:24:54 as ***
  • Silver- and Coomassie-staining protocols: detection limits and compatibility with ESI MS.
    Electrophoresis, Vol. 28, No. 12. (June 2007), pp. 2095-2099.
    posted to mass-spectrometry proteomics by robert on 2008-06-02 16:12:48 as ** along with 1 person hsekiguc
  • Biochemical and spectroscopic characterization of the covalent binding of heme to cytochrome b6.
    Biochemistry, Vol. 43, No. 13. (6 April 2004), pp. 3956-3968.
    by C de Vitry, A Desbois, V Redeker, F Zito, FA Wollman
    posted to analysis heme heme-protein mass-spectrometry spectroscopy by robert on 2008-06-04 10:43:31 as **
  • High MS-compatibility of silver nitrate-stained protein spots from 2-DE gels using ZipPlates and AnchorChips for successful protein identification.
    Electrophoresis, Vol. 28, No. 10. (May 2007), pp. 1607-1614.
  • Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry.
    Proc Natl Acad Sci U S A, Vol. 104, No. 7. (13 February 2007), pp. 2199-2204.
    by H Molina, DM Horn, N Tang, S Mathivanan, A Pandey
  • Characterization of a Nonheme Mononuclear Peroxoiron(III) Intermediate by UV/Vis and EPR Spectroscopy and Mass Spectrometry
    European Journal of Inorganic Chemistry, Vol. 1999, No. 6. (1999), pp. 993-996.
    by Ariane J Simaan, Frédéric Banse, Pierre Mialane, Alain Boussac, Sun Un, Taraneh Kargar-Grisel, Guy Bouchoux, Jean-Jacques Girerd
    posted to analysis epr iron mass-spectrometry non-heme uv by robert on 2006-06-23 16:23:07 as **
  • Mass Spectrometric Interrogation of Thioester-Bound Intermediates in the Initial Stages of Epothilone Biosynthesis
    Chemistry & Biology, Vol. 11, No. 3. (March 2004), pp. 327-335.
    by Leslie M Hicks, Sarah E O'Connor, Matthew T Mazur, Christopher T Walsh, Neil L Kelleher
    posted to mass-spectrometry by robert on 2007-07-09 14:04:51 as **
  • Moderne Massenspektrometrie: Grundlagen, Kopplungs-Und Ionisationstechniken
    (11 September 2006)
    by W Dreher
    posted to mass-spectrometry by robert on 2008-03-26 13:53:43 as **
  • DECOMP--from interpreting Mass Spectrometry peaks to solving the Money Changing Problem
    Bioinformatics, Vol. 24, No. 4. (15 February 2008), pp. 591-593.
    by Sebastian Bocker, Zsuzsanna Liptak, Marcel Martin, Anton Pervukhin, Henner Sudek
    posted to bioinformatics mass-spectrometry by robert on 2008-06-19 11:42:32 as ** along with 2 people jyuh laughcry
  • Automated mass correction and data interpretation for protein open-access liquid chromatography-mass spectrometry.
    Journal of mass spectrometry : JMS, Vol. 42, No. 2. (February 2007), pp. 139-149.
    by CD Wagner, JT Hall, WL White, LA Miller, JD Williams
    posted to lims mass-spectrometry by robert on 2008-06-05 16:10:35 as **
  • Direct isolation and sequencing of specific protein-binding glycosaminoglycans.
    Nature medicine, Vol. 7, No. 1. (January 2001), pp. 123-128.
    posted to analysis mass-spectrometry ptm-analysis sugar by robert on 2008-06-04 10:58:29 as **
  • Liquid chromatography/mass spectrometry sequencing approach for highly sulfated heparin-derived oligosaccharides.
    The Journal of biological chemistry, Vol. 279, No. 4. (23 January 2004), pp. 2608-2615.
    by C Thanawiroon, KG Rice, T Toida, RJ Linhardt
    posted to analysis hplc mass-spectrometry sugar by robert on 2008-06-04 10:55:43 as **
  • Chemoenzymatic approaches for streamlined detection of active site modifications on thiotemplate assembly lines using mass spectrometry.
    Biochemistry, Vol. 44, No. 43. (1 November 2005), pp. 14159-14169.
    by SM McLoughlin, MT Mazur, LM Miller, J Yin, F Liu, CT Walsh, NL Kelleher
    posted to mass-spectrometry screening by robert on 2008-03-31 14:27:13 as **
  • Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes
    Genome Res., Vol. 18, No. 7. (1 July 2008), pp. 1133-1142.
    by Nitin Gupta, Jamal Benhamida, Vipul Bhargava, Daniel Goodman, Elisabeth Kain, Ian Kerman, Ngan Nguyen, Noah Ollikainen, Jesse Rodriguez, Jian Wang, Mary S Lipton, Margaret Romine, Vineet Bafna, Richard D Smith, Pavel A Pevzner
  • Classification and identification of bacteria using mass spectrometry-based proteomics.
    Expert Rev Proteomics, Vol. 2, No. 6. (December 2005), pp. 863-878.
    by JP Dworzanski, AP Snyder
    posted to mass-spectrometry microorganism-identification proteomics by nedwards on 2007-08-30 16:31:32 as **
  • Label-free LC-MS/MS quantitative proteomics for large-scale biomarker discovery in complex samples.
    J Sep Sci (2 August 2007)
    by Yishai Levin, Emanuel Schwarz, Lan Wang, F Markus M Leweke, Sabine Bahn
  • Method for Qualitative Comparisons of Protein Mixtures Based on Enzyme-Catalyzed Stable-Isotope Incorporation
    J. Proteome Res., Vol. 4, No. 6. (12 December 2005), pp. 2109-2116.
    posted to mass-spectrometry protein-quantitation proteomics by nedwards on 2007-08-22 16:13:49 as **
  • Reproducibility Assessment of Relative Quantitation Strategies for LC-MS Based Proteomics
    Anal. Chem. (20 June 2007)
    by YJ Kim, P Zhan, B Feild, SM Ruben, T He
  • Comparison of Label-free Methods for Quantifying Human Proteins by Shotgun Proteomics
    Mol Cell Proteomics, Vol. 4, No. 10. (1 October 2005), pp. 1487-1502.
    by William M Old, Karen Meyer-Arendt, Lauren Aveline-Wolf, Kevin G Pierce, Alex Mendoza, Joel R Sevinsky, Katheryn A Resing, Natalie G Ahn
  • Chemical substructure identification by mass spectral library searching
    Journal of the American Society for Mass Spectrometry, Vol. 6, No. 8. (August 1995), pp. 644-655.
    by Stephen E Stein
    posted to mass-spectrometry spectral-matching by nedwards on 2007-08-08 20:24:52 as **
  • An assessment of software solutions for the analysis of mass spectrometry based quantitative proteomics data.
    J Proteome Res, Vol. 7, No. 1. (January 2008), pp. 51-61.
    by LN Mueller, MY Brusniak, DR Mani, R Aebersold
  • Quantitative Analysis of Modified Proteins and Their Positional Isomers by Tandem Mass Spectrometry: Human Histone H4
    Anal. Chem., Vol. 78, No. 13. (1 July 2006), pp. 4271-4280.
    by JJ Pesavento, CA Mizzen, NL Kelleher
    posted to ft-ms mass-spectrometry proteomics top-down by nedwards on 2007-12-12 20:03:50 as **
  • ProFound: An Expert System for Protein Identification Using Mass Spectrometric Peptide Mapping Information
    Anal. Chem., Vol. 72, No. 11. (1 June 2000), pp. 2482-2489.
    by W Zhang, BT Chait
    posted to mass-spectrometry protein-identification proteomics by nedwards on 2007-10-15 19:18:32 as **
  • Fourier-transform mass spectrometry for automated fragmentation and identification of 5-20 kDa proteins in mixtures
    ELECTROPHORESIS, Vol. 23, No. 18. (2002), pp. 3217-3223.
    by Jeffrey R Johnson, Fanyu Meng, Andrew J Forbes, Benjamin J Cargile, Neil L Kelleher
    posted to ft-ms mass-spectrometry proteomics top-down by nedwards on 2007-12-12 20:11:59 as **
  • A common open representation of mass spectrometry data and its application to proteomics research
    Nature Biotechnology, Vol. 22, No. 11. (04 November 2004), 1459.
    by Patrick GA Pedrioli, Jimmy K Eng, Robert Hubley, Mathijs Vogelzang, Eric W Deutsch, Brian Raught, Brian Pratt, Erik Nilsson, Ruth H Angeletti, Rolf Apweiler, Kei Cheung, Catherine E Costello, Henning Hermjakob, Sequin Huang, Randall K Julian, Eugene Kapp, Mark E Mccomb, Stephen G Oliver, Gilbert Omenn, Norman W Paton, Richard Simpson, Richard Smith, Chris F Taylor, Weimin Zhu, Ruedi Aebersold
  • A universal algorithm for fast and automated charge state deconvolution of electrospray mass-to-charge ratio spectra
    Journal of the American Society for Mass Spectrometry, Vol. 9, No. 3. (March 1998), pp. 225-233.
    by Zhongqi Zhang, Alan G Marshall
    posted to isotope-cluster-modeling mass-spectrometry peak-detection by nedwards on 2008-06-16 14:18:17 as **
  • New algorithm for 15N/14N quantitation with LC-ESI-MS using an LTQ-FT mass spectrometer.
    J Proteome Res, Vol. 5, No. 8. (August 2006), pp. 2039-2045.
    by VP Andreev, L Li, T Rejtar, Q Li, JG Ferry, BL Karger
  • Reproducibility of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for replicate bacterial culture analysis.
    Rapid Commun Mass Spectrom, Vol. 13, No. 15. (1999), pp. 1580-1585.
    by AJ Saenz, CE Petersen, NB Valentine, SL Gantt, KH Jarman, MT Kingsley, KL Wahl
  • Automated assignment of charge states from resolved isotopic peaks for multiply charged ions
    Journal of the American Society for Mass Spectrometry, Vol. 6, No. 1. (January 1995), pp. 52-56.
    by Michael W Senko, Steven C Beu, Fred W Mclafferty
    posted to isotope-cluster-modeling mass-spectrometry peak-detection by nedwards on 2008-06-16 14:44:34 as **
  • Exact Mass Measurement of Polar Organic Molecules at Low Resolution Using Electrospray Ionization and a Quadrupole Mass Spectrometer
    Anal. Chem., Vol. 68, No. 20. (15 October 1996), pp. 3561-3569.
    by AN Tyler, E Clayton, BN Green
    posted to isotope-cluster-modeling mass-spectrometry peak-detection by nedwards on 2008-06-16 14:40:13 as **
  • Normalization Approaches for Removing Systematic Biases Associated with Mass Spectrometry and Label-Free Proteomics
    J. Proteome Res., Vol. 5, No. 2. (3 February 2006), pp. 277-286.
    by SJ Callister, RC Barry, JN Adkins, ET Johnson, WJ Qian, BJM Webb-Robertson, RD Smith, MS Lipton
  • notes Reliable automatic protein identification from matrix-assisted laser desorption/ionization mass spectrometric peptide fingerprints
    Electrophoresis, Vol. 20, No. 18. (1999), pp. 3521-3526.
    by Peter Berndt, Uwe Hobohm, Hanno Langen
  • notes Proteolytic 18O Labeling for Comparative Proteomics: Evaluation of Endoprotease Glu-C as the Catalytic Agent
    J. Proteome Res., Vol. 1, No. 1. (21 February 2002), pp. 27-33.
    by KJ Reynolds, X Yao, C Fenselau
  • A review of quantitative methods for proteomic studies.
    J Chromatogr B Analyt Technol Biomed Life Sci, Vol. 855, No. 1. (1 August 2007), pp. 14-20.
  • Estimating the Precision of Exact Mass Measurements on an Orthogonal Time-of-Flight Mass Spectrometer
    Anal. Chem., Vol. 73, No. 3. (1 February 2001), pp. 715-719.
    by KF Blom
    posted to mass-spectrometry peak-detection by nedwards on 2008-06-16 14:41:30 as **
  • Bacillus cereus strains fall into two clusters (one closely and one more distantly related) to Bacillus anthracis according to amino acid substitutions in small acid-soluble proteins as determined by tandem mass spectrometry
    Molecular and Cellular Probes, Vol. 21, No. 3. (June 2007), pp. 190-201.
    by Elisangela R Castanha, Marvin Vestal, Steve Hattan, Alvin Fox, Karen F Fox, Danielle Dickinson
  • On the proper use of mass accuracy in proteomics.
    Mol Cell Proteomics, Vol. 6, No. 3. (March 2007), pp. 377-381.
    by R Zubarev, M Mann
    posted to mass-spectrometry proteomics by nedwards on 2007-08-30 16:41:27 as ** along with 1 person jyuh
  • Top-down proteomics for rapid identification of intact microorganisms.
    Anal Chem, Vol. 77, No. 22. (15 November 2005), pp. 7455-7461.
    by PA Demirev, AB Feldman, P Kowalski, JS Lin
  • An integrated mass spectrometric and computational framework for the analysis of protein interaction networks
    Nature Biotechnology, Vol. 25, No. 3. (25 February 2007), pp. 345-352.
    by Oliver Rinner, Lukas N Mueller, Martin Hubálek, Markus Müller, Matthias Gstaiger, Ruedi Aebersold
  • Protein abundance quantification in embryonic stem cells using incomplete metabolic labelling with 15N amino acids, matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry, and analysis of relative isotopologue abundances of peptides.
    Rapid Commun Mass Spectrom, Vol. 17, No. 12. (2003), pp. 1273-1282.
  • Achieving in-depth proteomics profiling by mass spectrometry.
    ACS Chem Biol, Vol. 2, No. 1. (23 January 2007), pp. 39-52.
    by NG Ahn, JB Shabb, WM Old, KA Resing
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