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タグ: kinetics [326 articles]

Recent papers classified by the tag kinetics.
  • Kinetics of the foot and ankle during gait
    Engineering in Medicine and Biology society, 1997. Proceedings of the 19th Annual International Conference of the IEEE, Vol. 4 (1997), pp. 1829-1830 vol.4.
    by FS Abuzzahab, GF Harris, SM Kidder, JE Johnson
    posted to ankle gait kinetics tese by ZeAugusto on 2006-04-19 15:20:10 as ** along with 1 person and 3 groups wellnair Virtual_Reality Rehabilitation_Engineering Movement_Analysis
  • Comparison of 3D joint moments using local and global inverse dynamics approaches among three different age groups.
    Gait Posture (17 August 2005)
    by Jian Liu, Thurmon E E Lockhart
    posted to gait kinetics methodology by ZeAugusto on 2006-04-19 15:17:23 as ** along with 1 person and 2 groups thurbi Rehabilitation_Engineering Movement_Analysis
  • The dynamics of human gait
    European Journal of Physics, Vol. 26, No. 3. (May 2005), pp. 525-534.
    by Matjaz Perc
    posted to gait kinetics theory by ZeAugusto on 2006-04-25 06:47:48 as ** along with 1 group Movement_Analysis
  • The mechanism of the reverse recovery-step, phosphate release, and actin activation of Dictyostelium myosin II.
    J Biol Chem (21 January 2008)
    by Máté Gyimesi, Bálint Kintses, Andrea Bodor, András Perczel, Stefan Fischer, Clive R R Bagshaw, András Málnási-Csizmadia
    posted to adp kinetics myosin by yalexeev on 2008-02-19 16:34:49 as **
  • Aspects of Protein Reaction Dynamics: Deviations from Simple Behavior
    J. Phys. Chem. B, Vol. 104, No. 1. (13 January 2000), pp. 11-27.
    by M Karplus
    posted to kinetics by yalexeev on 2008-01-28 14:42:23 as ** along with 1 person ruvido
  • Ever-fluctuating single enzyme molecules: Michaelis-Menten equation revisited
    Nat Chem Biol, Vol. 2, No. 2. (February 2006), pp. 87-94.
    by Brian P English, Wei Min, Antoine M van Oijen, Kang T Lee, Guobin Luo, Hongye Sun, Binny J Cherayil, SC Kou, Sunney X Xie
    posted to catlaysis enzyme kinetics michaelis-menten by xico on 2006-01-29 20:31:01 as **** along with 1 person and 1 group shuns WetBiology
  • Bayesian sequential inference for stochastic kinetic biochemical network models.
    J Comput Biol, Vol. 13, No. 3. (April 2006), pp. 838-851.
    by A Golightly, DJ Wilkinson
    posted to bayesian inference kinetics stochastic by wnpx on 2006-07-26 20:51:42 as **
  • Adsorption Kinetics of Hydrogen Sulfide and Thiols on GaAs (001) Surfaces in a Vacuum
    J. Phys. Chem. C (20 February 2008)
    by O Voznyy, JJ Dubowski
    posted to ab-initio adsorption chemisorption desorption dft dynamics energetics energy first-principles gaas h2 h2s kinetics physisorption reconstruction siesta thiol by vozny on 2008-02-22 20:08:32 as read
  • Reaction kinetics in a tight spot.
    Small, Vol. 1, No. 5. (May 2005), pp. 502-504.
    by O Biham, J Krug, A Lipshtat, T Michely
    posted to biology cell kinetics networks reaction by ullahmukhtar on 2007-08-06 13:30:47 as ***
  • Molecular physiology and pharmacology of HERG. Single-channel currents and block by dofetilide.
    Circulation, Vol. 94, No. 10. (15 November 1996), pp. 2572-2579.
    by J Kiehn, AE Lacerda, B Wible, AM Brown
    posted to kinetics herg by tomb on 2007-02-10 10:12:12 as ****
  • notes Estimating kinetic constants from single channel data.
    Biophys. J., Vol. 43, No. 2. (1 August 1983), pp. 207-223.
    by R Horn, K Lange
    posted to theory markov kinetics by tomb on 2007-02-10 08:34:00 as ****
  • Sintering kinetics at final stage sintering: model calculation and map construction
    Acta Materialia, Vol. 52, No. 15. (6 September 2004), pp. 4573-4578.
    by Suk-Joong L Kang, Yang-Il Jung
    posted to 3rd-stage kinetics sintering by TCgroup on 2007-07-16 22:15:14 as ****
  • Sol-gel processing and sintering of yttrium aluminum garnet (YAG) powders
    Journal of Materials Science, Vol. 31, No. 13. (1 January 1996), pp. 3453-3458.
    by R Manalert, MN Rahaman
    posted to aerogel garnet kinetics sintering yag by TCgroup on 2007-08-11 23:43:31 as read
  • Computer Simulation of Final-Stage Sintering: I, Model Kinetics, and Microstructure
    Journal of the American Ceramic Society, Vol. 73, No. 10. (1990), pp. 2857-2864.
    by Gregory N Hassold, I-Wei Chen, David J Srolovitz
    posted to 3rd-stage kinetics microstructure monte-carlo numerical sintering by TCgroup on 2007-07-13 21:38:29 as *****
  • Creep Mechanism of Polycrystalline Yttrium Aluminum Garnet
    Journal of the American Ceramic Society, Vol. 75, No. 7. (1992), pp. 1756-1759.
    by Triplicane A Parthasarathy, Tai-Il Mah, Kristen Keller
    posted to creep diffusion garnet kinetics nbarro yag by TCgroup on 2007-08-14 21:46:43 as ****
  • Adaptive stochastic-deterministic chemical kinetic simulations
    Bioinformatics, Vol. 20, No. 1. (1 January 2004), pp. 78-84.
    by Karan Vasudeva, Upinder S Bhalla
    posted to bioinformatics kinetics simulation by subhacom on 2007-06-02 12:11:12 as ***
  • Diffusion-reaction modelling of DNA hybridization kinetics on biochips
    Chemical Engineering Science, Vol. 58, No. 21. (November 2003), pp. 4921-4930.
    by K Pappaert, P Van Hummelen, J Vanderhoeven, GV Baron, G Desmet
    posted to diffusion dna hybridization kinetics by stsaft on 2006-02-28 00:08:24 as **
  • Convective flow effects on DNA biosensors
    Biosensors and Bioelectronics, Vol. 22, No. 9-10. (15 April 2007), pp. 2192-2198.
    by J Bishop, S Blair, A Chagovetz
    posted to diffusion hybridization kinetics microarrays by stsaft on 2007-04-30 21:38:04 as **
  • Comparative modeling and analysis of microfluidic and conventional DNA microarrays
    Analytical Biochemistry, Vol. 348, No. 2. (15 January 2006), pp. 284-293.
    by James A Benn, Jenny Hu, Bradley J Hogan, Rebecca C Fry, Leona D Samson, Todd Thorsen
    posted to diffusion hybridization kinetics microarrays simulation by stsaft on 2007-04-30 21:36:48 as ****
  • A dimensionless number analysis of the hybridization process in diffusion- and convection-driven DNA microarray systems
    Journal of Biotechnology, Vol. 123, No. 4. (10 June 2006), pp. 381-396.
    by Kris Pappaert, Gert Desmet
    posted to hybridization kinetics microarray simulation thermodynamics by stsaft on 2007-04-30 21:28:44 as *****
  • Modeling hybridization kinetics
    Math Biosci, Vol. 183, No. 1. (May 2003), pp. 37-47.
    by JY Wang, K Drlica
    posted to dna hybridization kinetics by stsaft on 2006-02-28 21:08:36 as **
  • Tests of rRNA hybridization to microarrays suggest that hybridization characteristics of oligonucleotide probes for species discrimination cannot be predicted
    Nucleic Acids Research, Vol. 34, No. 9. (2006), pp. e66-e66.
    by Pozhitkov, Alex, Noble, A Peter, Domazet-Loso, Tomislav, Nolte, W Arne, Sonnenberg, Rainer, Staehler, Peer, Beier, Markus, Tautz, Diethard
    posted to probe microarray kinetics hybridization errors by stsaft on 2008-06-06 19:15:18 as **
  • Mfold web server for nucleic acid folding and hybridization prediction
    Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3406-3415.
    by M Zuker
    posted to dna folding kinetics by stsaft on 2006-02-28 21:03:43 as ** along with 6 people and 2 groups davidng dayjm balajis dquest cdawson vwchan beta GIG
  • A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
    Proc Natl Acad Sci U S A, Vol. 95, No. 4. (17 February 1998), pp. 1460-1465.
    by J Santalucia
    posted to dna kinetics thermodynamics by stsaft on 2006-02-28 20:58:06 as ** along with 2 people davidng talponer
  • Predicting out-of-sequence reassembly in DNA shuffling
    J Theor Biol, Vol. 219, No. 1. (7 November 2002), pp. 9-17.
    by GL Moore, CD Maranas
    posted to dna kinetics shuffling by stsaft on 2006-02-28 20:53:16 as **
  • Predicting oligonucleotide affinity to nucleic acid targets
    RNA, Vol. 5, No. 11. (November 1999), pp. 1458-1469.
    by DH Mathews, ME Burkard, SM Freier, JR Wyatt, DH Turner
    posted to dna kinetics thermodynamics by stsaft on 2006-02-28 20:52:18 as ** along with 1 person Hosna
  • notes Computer Simulation Study of Molecular Recognition in Model DNA Microarrays
    Biophys. J., Vol. 91, No. 6. (15 September 2006), pp. 2227-2236.
    by Arthi Jayaraman, Carol K Hall, Jan Genzer
    posted to cross hybridization kinetics microarrays modeling by stsaft on 2008-02-28 18:38:19 as *****
  • GenXHC: a probabilistic generative model for cross-hybridization compensation in high-density genome-wide microarray data.
    Bioinformatics, Vol. 21 Suppl 1 (June 2005)
    by JC Huang, QD Morris, TR Hughes, BJ Frey
    posted to cross hybridization kinetics microarrays by stsaft on 2008-02-28 18:31:17 as **
  • DNA Modeling within Ab Initio and Empirical Methods
    pp. 349-383.
    by I Cozmuta
    posted to dna kinetics model simulation thermodynamics by stsaft on 2008-02-05 00:47:46 as ****
  • A mathematical model and a computerized simulation of PCR using complex templates
    Nucleic Acids Res, Vol. 24, No. 18. (15 September 1996), pp. 3538-3545.
    by E Rubin, AA Levy
    posted to dna kinetics simulation by stsaft on 2006-03-07 04:54:54 as **
  • Parallel multiplex thermodynamic analysis of coaxial base stacking in DNA duplexes by oligodeoxyribonucleotide microchips
    Nucl. Acids Res., Vol. 29, No. 11. (1 June 2001), pp. 2303-2313.
    by Vadim A Vasiliskov, Dmitry V Prokopenko, Andrei D Mirzabekov
    posted to thermodynamics microarrays kinetics dna by stsaft on 2007-01-19 22:44:11 as *****
  • Prediction of hybridization and melting for double-stranded nucleic acids.
    Biophys J, Vol. 87, No. 1. (July 2004), pp. 215-226.
    by RA Dimitrov, M Zuker
    posted to thermodynamics kinetics dna by stsaft on 2007-01-19 22:38:28 as *****
  • Thermodynamic Analysis of Interacting Nucleic Acid Strands
    SIAM Review, Vol. 49, No. 1. (2007), pp. 65-88.
    by Robert M Dirks, Justin S Bois, Joseph M Schaeffer, Erik Winfree, Niles A Pierce
    posted to kinetics self-assembly by stsaft on 2008-01-21 22:59:04 as ** along with 1 person Hosna
  • The importance of thermodynamic equilibrium for high throughput gene expression arrays.
    Biophys J, Vol. 84, No. 1. (January 2003), pp. 124-135.
    by G Bhanot, Y Louzoun, J Zhu, C DeLisi
    posted to hybridization kinetics microarrays modeling simulation by stsaft on 2008-03-31 03:55:50 as ** along with 1 person and 1 group condon beta
  • Modeling hybridization kinetics
    Mathematical Biosciences, Vol. 183, No. 1. (May 2003), pp. 37-47.
    by Jian-Ying Wang, Karl Drlica
    posted to dna hybridization kinetics by stsaft on 2008-03-29 20:06:10 as read
  • A Competitive Kinetic Model of Nucleic Acid Surface Hybridization in the Presence of Point Mutants
    Biophys. J., Vol. 90, No. 3. (1 February 2006), pp. 831-840.
    by J Bishop, S Blair, AM Chagovetz
    posted to kinetics microarrays modeling simulation thermodynamics by stsaft on 2008-03-31 03:52:42 as **
  • Modeling of DNA hybridization kinetics for spatially resolved biochips
    Analytical Biochemistry, Vol. 317, No. 2. (15 June 2003), pp. 186-200.
    by David Erickson, Dongqing Li, Ulrich J Krull
    posted to hybridization kinetics microarrays model simulation thermodynamics by stsaft on 2008-03-31 03:49:32 as **
  • eCodonOpt: a systematic computational framework for optimizing codon usage in directed evolution experiments.
    Nucleic acids research, Vol. 30, No. 11. (1 June 2002), pp. 2407-2416.
    by GL Moore, CD Maranas
    posted to thermodynamics shuffling kinetics crossover by stsaft on 2008-05-23 06:06:30 as **
  • Expression microarray hybridization kinetics depend on length of the immobilized DNA but are independent of immobilization substrate.
    Anal Biochem, Vol. 295, No. 2. (15 August 2001), pp. 149-157.
    by BA Stillman, JL Tonkinson
    posted to dna kinetics by stsaft on 2006-03-29 09:29:47 as **
  • Computational and experimental analysis of DNA shuffling.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 6. (18 March 2003), pp. 3071-3076.
    by N Maheshri, DV Schaffer
    posted to thermodynamics shuffling kinetics crossover by stsaft on 2008-05-23 06:05:40 as **
  • notes On Limits of Performance of Dna Microarrays
    Acoustics, Speech and Signal Processing, 2006. ICASSP 2006 Proceedings. 2006 IEEE International Conference on, Vol. 2 (2006), pp. II-II.
    by H Vikalo, B Hassibi, A Hassibi
    posted to cross hybridization kinetics microarrays modeling by stsaft on 2008-02-28 21:54:01 as **
  • Kinetics of diffusion-influenced bimolecular reactions in solution. I. General formalism and relaxation kinetics of fast reversible reactions
    The Journal of Chemical Physics, Vol. 86, No. 4. (1987), pp. 1883-1903.
    by Sangyoub Lee, Martin Karplus
    posted to kinetics statistical_mechanics by sobolevnrm on 2008-02-18 12:46:35 as read along with 1 group baker-group
  • Modeling diffusive dynamics in adaptive resolution simulation of liquid water
    The Journal of Chemical Physics, Vol. 128, No. 2. (2008)
    by Silvina Matysiak, Cecilia Clementi, Matej Praprotnik, Kurt Kremer, Luigi Delle Site
    posted to diffusion kinetics multiscale solvation by sobolevnrm on 2008-02-18 12:34:36 as read along with 1 group baker-group
  • The random walk's guide to anomalous diffusion: a fractional dynamics approach
    Physics Reports, Vol. 339, No. 1. (December 2000), pp. 1-77.
    by Ralf Metzler, Joseph Klafter
    posted to diffusion kinetics mathematics statistical_mechanics teaching by sobolevnrm on 2007-10-11 12:52:13 as read along with 2 people and 1 group ansobol Borelli baker-group
  • Random Walks on Lattices. II
    Journal of Mathematical Physics, Vol. 6, No. 2. (1965), pp. 167-181.
    by Elliott W Montroll, George H Weiss
    posted to diffusion kinetics mathematics statistical_mechanics by sobolevnrm on 2007-10-11 12:50:01 as read along with 2 people and 1 group ansobol yaroslavvb baker-group
  • Fluid limit of the continuous-time random walk with general L[e-acute]vy jump distribution functions
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 76, No. 4. (2007)
    by Cartea, Del
    posted to diffusion kinetics mathematics teaching by sobolevnrm on 2007-10-11 12:48:02 as **
  • notes Coarse Master Equations for Peptide Folding Dynamics
    J. Phys. Chem. B (31 January 2008)
    by NV Buchete, G Hummer
    posted to kinetics multiscale protein_folding by sobolevnrm on 2008-02-29 12:18:27 as read along with 2 people and 1 group apaydin ruvido baker-group
  • How a Vicinal Layer of Solvent Modulates the Dynamics of Proteins
    Biophys. J., Vol. 94, No. 1. (1 January 2008), pp. 79-89.
    by Canan Atilgan, Ayse O Aykut, Ali R Atilgan
    posted to kinetics molecular_dynamics solvation by sobolevnrm on 2008-01-22 12:27:09 as read along with 1 person and 1 group pavanghatty baker-group
  • Continuum Simulations of Acetylcholine Consumption by Acetylcholinesterase: A Poisson-Nernst-Planck Approach
    J. Phys. Chem. B, Vol. 112, No. 2. (17 January 2008), pp. 270-275.
    by YC Zhou, B Lu, GA Huber, MJ Holst, JA Mccammon
    posted to acetylcholinesterase diffusion electrostatics kinetics by sobolevnrm on 2008-01-10 12:51:17 as read along with 1 group baker-group
  • Protein Sequence- and pH-Dependent Hydration Probed by Terahertz Spectroscopy
    J. Am. Chem. Soc., Vol. 130, No. 8. (27 February 2008), pp. 2374-2375.
    by S Ebbinghaus, SJ Kim, M Heyden, X Yu, M Gruebele, DM Leitner, M Havenith
    posted to kinetics protein_folding solvation by sobolevnrm on 2008-03-03 11:46:31 as read along with 1 group baker-group
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