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タグ: interpro [15 articles]

Recent papers classified by the tag interpro.
  • PANTHER version 6: protein sequence and function evolution data with expanded representation of biological pathways.
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by H Mi, N Guo, A Kejariwal, PD Thomas
    posted to database hmm interpro panther protein sequences by siebertm on 2007-05-22 12:24:27 as * along with 4 people bootsy skumagai thomaskelder jyuh
  • The ProDom database of protein domain families: more emphasis on 3D.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by C Bru, E Courcelle, S Carrère, Y Beausse, S Dalmar, D Kahn
    posted to clustering database interpro prodom sequence by siebertm on 2007-05-22 12:11:51 as * along with 2 people cjeans gulkur
  • The TIGRFAMs database of protein families.
    Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 371-373.
    by DH Haft, JD Selengut, O White
    posted to database families hmm interpro protein tigrfam by siebertm on 2007-05-22 12:16:47 as * along with 2 people Cortel wenhan
  • Pfam: clans, web tools and services.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by RD Finn, J Mistry, B Schuster-Böckler, S Griffiths-Jones, V Hollich, T Lassmann, S Moxon, M Marshall, A Khanna, R Durbin, SR Eddy, EL Sonnhammer, A Bateman
    posted to database families hmm interpro pfam protein by siebertm on 2007-05-22 12:13:43 as * along with 10 people gbart dullhunk massivemayhem cjeans lpfernandes pablomendes antonkratz natstreet Lombardo_7 phoenixzxl
  • The SUPERFAMILY database in 2007: families and functions.
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by D Wilson, M Madera, C Vogel, C Chothia, J Gough
    posted to database families hmm interpro protein superfamily by siebertm on 2007-05-22 12:20:02 as * along with 1 person and 1 group Einat structural_bioinformatics
  • SMART 5: domains in the context of genomes and networks.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by I Letunic, RR Copley, B Pils, S Pinkert, J Schultz, P Bork
    posted to database domains hmm interpro protein smart by siebertm on 2007-05-22 12:15:21 as * along with 1 person chad_davis
  • Gene3D: modelling protein structure, function and evolution.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by C Yeats, M Maibaum, R Marsden, M Dibley, D Lee, S Addou, CA Orengo
    posted to database families gene3d interpro protein by siebertm on 2007-05-22 12:22:24 as * along with 1 person and 2 groups marcius BioinfoCIPF SGU-CIPF
  • New developments in the InterPro database.
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by NJ Mulder, R Apweiler, TK Attwood, A Bairoch, A Bateman, D Binns, P Bork, V Buillard, L Cerutti, R Copley, E Courcelle, U Das, L Daugherty, M Dibley, R Finn, W Fleischmann, J Gough, D Haft, N Hulo, S Hunter, D Kahn, A Kanapin, A Kejariwal, A Labarga, PS Langendijk-Genevaux, D Lonsdale, R Lopez, I Letunic, M Madera, J Maslen, C Mcanulla, J Mcdowall, J Mistry, A Mitchell, AN Nikolskaya, S Orchard, C Orengo, R Petryszak, JD Selengut, CJ Sigrist, PD Thomas, F Valentin, D Wilson, CH Wu, C Yeats
    posted to database gene3d integrated interpro panther pfam pirsf prints prodom prosite resource smart superfamily tigrfams by siebertm on 2007-05-18 21:26:35 as read along with 4 people jyuh balajis sgoetz pablomendes
  • PRINTS and its automatic supplement, prePRINTS.
    Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 400-402.
    by TK Attwood, P Bradley, DR Flower, A Gaulton, N Maudling, AL Mitchell, G Moulton, A Nordle, K Paine, P Taylor, A Uddin, C Zygouri
    posted to database fingerprints interpro prints pssm by siebertm on 2007-05-22 12:04:33 as * along with 1 person Cortel
  • PIRSF: family classification system at the Protein Information Resource.
    Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004)
    by CH Wu, A Nikolskaya, H Huang, LS Yeh, DA Natale, CR Vinayaka, ZZ Hu, R Mazumder, S Kumar, P Kourtesis, RS Ledley, BE Suzek, L Arminski, Y Chen, J Zhang, JL Cardenas, S Chung, J Castro-Alvear, G Dinkov, WC Barker
    posted to classification database family interpro pirsf by siebertm on 2007-05-22 12:18:30 as * along with 1 person Cortel
  • InterProScan--an integration platform for the signature-recognition methods in InterPro.
    Bioinformatics, Vol. 17, No. 9. (September 2001), pp. 847-848.
    by EM Zdobnov, R Apweiler
    posted to classification interpro protein software tool by leechuck on 2007-05-03 11:44:09 as * along with 3 people and 1 group indigoviolet dullhunk sgoetz EisenLab
  • Extending pathways based on gene lists using InterPro domain signatures
    BMC Bioinformatics, Vol. 9 (04 January 2008), 3.
    by Florian Hahne, Alexander Mehrle, Dorit Arlt, Annemarie Poustka, Stefan Wiemann, Tim Beissbarth
    posted to geneset gsea interpro by frohike to the group Bioinformatics on 2008-04-04 10:26:10 as ** along with 4 people ealloza renatomilani jyuh AlexanderPico
  • InterProScan: protein domains identifier.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005)
    by E Quevillon, V Silventoinen, S Pillai, N Harte, N Mulder, R Apweiler, R Lopez
    posted to interpro interproscan by dullhunk on 2007-10-26 14:01:17 as ** along with 2 people Cortel sgoetz
  • InterPro, progress and status in 2005.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by NJ Mulder, R Apweiler, TK Attwood, A Bairoch, A Bateman, D Binns, P Bradley, P Bork, P Bucher, L Cerutti, R Copley, E Courcelle, U Das, R Durbin, W Fleischmann, J Gough, D Haft, N Harte, N Hulo, D Kahn, A Kanapin, M Krestyaninova, D Lonsdale, R Lopez, I Letunic, M Madera, J Maslen, J Mcdowall, A Mitchell, AN Nikolskaya, S Orchard, M Pagni, CP Ponting, E Quevillon, J Selengut, CJ Sigrist, V Silventoinen, DJ Studholme, R Vaughan, CH Wu
    posted to interpro by dullhunk on 2007-10-26 14:02:35 as **
  • InterPro and InterProScan: Tools for Protein Sequence Classification and Comparison.
    Methods Mol Biol, Vol. 396 (2007), pp. 59-70.
    by N Mulder, R Apweiler
    posted to interpro by DNAReplication on 2008-02-05 19:28:26 as **
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